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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoASG_c29245_g4_i3
Scaffold_idBomo_Chr11
NCBI non-redundant
(nr)		uncharacterized_protein_LOC101735722_[Bombyx_mori]
Ontology
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005634 C nucleus
GO:0005703 C polytene chromosome puff
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006979 P response to oxidative stress
GO:0007275 P multicellular organism development
GO:0007310 P oocyte dorsal/ventral axis specification
GO:0007317 P regulation of pole plasm oskar mRNA localization
GO:0007350 P blastoderm segmentation
GO:0008103 P oocyte microtubule cytoskeleton polarization
GO:0008340 P determination of adult lifespan
GO:0008359 P regulation of bicoid mRNA localization
GO:0042070 P maintenance of oocyte nucleus location involved in oocyte dorsal/ventral axis specification
GO:0043565 F sequence-specific DNA binding
GO:0045450 P bicoid mRNA localization
GO:0045451 P pole plasm oskar mRNA localization
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046982 F protein heterodimerization activity
GO:0048813 P dendrite morphogenesis
GO:0060322 P head development
GO:0060465 P pharynx development
Transcript
Level		FPKM:17.57 TPM:13.48
ORF EntryO_BomoASG15898_complete:A_BomoASG_c29245_g4_i3
Sequence
(Nucleotide)
GACACGGTCGAAGATATAACTTGTATTTTGATAATTTAAAACAATTAACGAGAATTGAAA
ATAAAAATACAATCGACGGGTCCAAAGTTTAGTTTATTAACTTTAGTGTTGCATTACAAA
GTGAAATTCGCCTAGACGAGTTTGAAAGAAATTTATAACGCAAACTGCCACAGTACTAGA
AGTGATTAGAAAAGTCAAGTGAAAAATAAAAGTGAATAAACAAATTGAAATAAAAAAAAA
AAACTTTTTTGGCTCTATCCCAACTGACTCAGTAGTGTGCATCAAAATGTATACGTTTAC
GCTGAAATGGTACTTTTCGGGGCGAAAGTGACAAAGAACCAAGATGTCTCCCGATAAACG
CAAAAGGAGGATCGGAGAGGAAATTCATTTTAGTAACAAAATAAGGACTCGTATATAAAA
GCCCCAAATATCATATACATATTATAAATAAATATATCTGATCTCAAAATATCTTAGTGC
TCAATATTAGTTTATTCTAATACAATTTTGATACATCGAAAATGATCGCCCTGAAGAAAC
TATATGGCGACGAGCTACTTCGCCTGGCTCTGGTTTTGAGTTTGCTCAGGATCGACCCAG
ACGACTACCTCGAACGGGAGACCCAGTTGCTGGCCGGTCTGCACATCGCGAACGGTTCCG
ACCTGTCCCCGGAACAGGAGGCCCGGACGCTGATACGGCCGAGGTTCGTCCACCCCAAGT
CCCTGGACAACATCCTCGTGAACTACGAGAGGCAGCTGTTTGAAGAGCTCAACTCCTTGG
GCCGGTACGGTCCAAGCGCACATAATGCCCGGATGTGGCAGAACCGTGGCCCGATTCTTC
ATACATATTTATTGAACGATGTCGCAACTGGCGCAGTCGAACCCGTGTCAGCGGCCCAGT
CGGTCGCAACCGACCAGGACGCCGTCTCGGCGGACGACAACGTCGCCCAGGAGGTCAAAG
TGACCGACGAGGACGCCCAAGACCAAAGTCGCGAGTCCACGGTGACGGTGTCGGACAACT
TCCTCCACAATCGCACCGAATCGGATATATTTCCGGAGATCGCTTCCAGAACCTTCGACG
TGACCGAGTTCCTGGTGCAGCAGGACAATATGCAAATTAAAAAGGAACAGGACGAGGCTT
TCGACCTCAAGGTCAACGAATCGAACACCGATGACTTTTACAGTGACAACGCTATCGACT
TTGCGACTTATTTTGCTGCAAGATCCGAGAAGATCGAGGTGGAGGAGCCTAATTTATATC
ACCAGAATATGGCCGACCTTCAAGATTATGGGGACGTCTTCACCGACGATCCGGACCTCA
AACACGACCTGGAACTAGACATAAAACAACAGCAGGAGAACTTGGAACAGTATCTCCTTG
AGAACACTCCTTTGGAAGCGGAGGTCTATGAATTGGCTCCAATGTTTGAAGAGGAACTGG
TGTTGGACGTTAAGAGGGAAAGAGCTAGCACTAGTTTCACGTCGGCCAGTTCGAGTGGCG
TGAGCGAGATGGACATATCCGACGTCAAAACCGAGCCGTTGGACTATAATGACGTCAAGG
TCGAGCCTGATGAGGGGAACCATACTGGAGATGAACTGACGCAAGAGGACATGGATCTCA
TCGAGGTGCTCTGGAAGCAGGACGTGGACATGGGATTCTCGCTCGAAGATCCAATACAGC
CGGAAGGTCCGCAAGCCACGAAGGTATTGGGGGAGGAAATCGACAAGGAACTGCTGAAGG
CCAAAGATAGGATCCAGAAGAACTATGAAGATGAAGAGCTGAAGAAGGTTGAGATAGAGA
AGGTCAAGGCTTCGTTGTTGGATCCCGAAGTCAAAGAGGATGATCCCTGGGCTGGCCTAT
CCTACACCGTCGACACGGAAACCGGCGAATACGTGATCCAAGGAGAACTGCCCAGGGAGC
TGGTGAGCGGCGAGGAGTCGCGCTTCGATTTGCTGGAGGAGGCGCTTCAGCTGGTGGAAC
TCGGAGACGGCGCTGAAGCCAAAGATGAACCCACTGAGGCGGTAGAAGGGAGTAGCACCG
ATCGCAGGAGCACCATGTTGCACCCTGCCATGCGGCATGTCCCGCACCACCCCCTCGCCC
ATTACCACAACCAGTCGTTGATGCGGTCGATGTCGGTGGAGCAACGCTGGCAGGACCTCG
CCTCTCTGCTGACCATCCCGCCGCCACCGGAGCAGTACCAACACTACCACCATCACCACC
AGCACCCGCACAACATCAGCGCCCATGGAGCGGCCGGCTATGCTCCGAACTACCACGGAC
CTCACGGACCCCACGGACCTCACGGACCTCACGCTGCTCACGTGCCGCACGCGCCGCACG
CACCCCTCCCGGCTCCGGTGGCCGATAAACATCCGGATGCGTACGTAGGGGCAACTGCTC
CCATAGAAGGGGGGTACAAAGTTGAGAGTACTCATCCCTCGCAACAGCAGGATGGAGTTT
ATTATCAGAACACGCCCGCCGAGATGCCGGGGCCAGTCAACCAGGACGGCTTCCTCCAGT
CGATCCTCAACGACGAGGACCTGCAGCTGATGGATATGGCGATGAACGAAGGAATGTACA
CAATGCGAATGCTGGACGGGGCGAGCTCCCACCACGGCCCCCACCACAACCACTCCCACA
TGATGGTGCCAGAGCGTGATTCCGCATCAGACAGTGCCGTCTCCTCGATGGGCTCCGAAC
GCGTGCCTTCGCTTTCGGACGGCGAATGGTGCGACGGTAGCGATTCCGCCCAAGAGTTCC
ACAGTTCCAAATTCCGCCCATTCGAAAGCTCTTACGGCAGAGAGCGCTCCGCCTCCCACC
AGCCCCAGAAGAAGCACCACATGTTTGGGAAGAGATGCTTTCAGGAGCAGCCGCCGCCTC
CCATGGAGCCGGTGCAGACGCAGCGACCTACTCCCGTCAAGTACGAGTGTCCGGAGCAGG
CTTACCACCACGAGGGCCTGCACATGCACAACGATTTCGGAGGGCGGCACCAGGTCGCTC
CGCCCCACGTGGCGGGTCTGCAGCCGGCGTTAGAGCTGAACGCGCCCCACTCCAGCCACG
CCCTGCTCCAGGGCGCCGTGGGGCCGGGGTTCGGAGTCCCGGAGCGCGTGCGGCACAACC
ACACGTACAGCGCGCCCCTCGCCGCGCCCCCGCACGCCCCCACCGTGCGCGACAAAAGGG
TTCGCCGACTCACCGACGGTAGCGCTTCGGACGGGGGCTCATCATGCACCAGCGCGCAGC
ATCTGTCCCGAGACGAGAAACGGGCCAAGGCATTAGGTATCCCCCTCGAAGTCCAGGACA
TCATTAATCTGCCCATGGACGAGTTCAACGAGAGACTGTCGAAGCACGACCTCAGCGAGG
CGCAGTTGTCGCTGATCCGGGACATCAGGAGGCGGGGCAAGAACAAAGTGGCAGCACAGA
ACTGCCGGAAACGGAAACTGGACCAGATAACCTCGCTCGCGGACGAGGTCAGGACCGTCC
GGGACAGGAAGCTGAGGACCCAGAGGGACCACCACAGTCTGCTGGCCGAGAGGCAGAGGC
TCAAGGAGAGGTTTGCGGCCCTATACCGACACGTTTTCCAGAACCTCCGCGACCCCGAAG
GGAGGCCGCTGTCCTCGGGCCAGTACTCGCTGCAGCAGGCGGCTGACGGCAACGTGGTCC
TCGTGCCGAAGATGCCTCAACACCAAGATCACCCGATGAACAGGACTTCGGATGATGAGA
TGGAGAGGAAAGCCAAGCACTACGACCAGTGACACATGGCCGCGCTCCGCCGCGCCGCTG
CCTCCCAGCGAGGGGTCTACTCTTAAGTGCGGCCAGAATTATCTGACTGACAGAACTATC
TAAAAGACACCTGCCAAAATTGACAGCTGTCAACCGTAGTATTAAGGCGCGGACGGGCAA
AGGGTAATTTAGTACATACGTCATTTTGTATATATAGATCGGTTTCGCGGGACGTATCGC
CGTCCCTCTCGCACCTACACCACCCTCCACCACTATTATTGGAAGCGTAGGTTTTTGATG
CGACCTAATATCGACCTTAAGCATTAAGGCACAAGTAACAAATTGGTTTAACGTTGTACA
ATTAATTTTATGATTCGCTTCCTATTCATTTCTAATATAACATATTATTATGTGCTTAAA
AAAAAGTCTGATTATTTTTATTGTTGATACCCACGTCATTATGAAATAGAAAAGTATTTG
AAAAACAGATGAGAAAATTTCATCATGCTTTATCTTCATCAGCTTATTACATTACACAAT
GTAAATTATATGCTCTCAATGATATTACTGCCAAATTAGATTTTGGGATGCAACCTTTGT
TTGTTGAAATTATTATGCGAGGGAAAGGGATGGCGATATAAGTCTTATTCATTCGGTAAA
TTCCGACGATTTTAGTATACATATTAAATTGAGCTTTGTGTGCGAGCAACACGGGTTGTA
TTTGTAGCAGAAGCGATGCACGGCGCAATGCAATACAAACTCGACTGACGGGGTGAACGA
CCTCATAGGATTCGCTTTTCATTGCGCGTTAACTAACCGCTATAGTCTCCCTGAACTGTA
TATGTCAGGGGCGCACGAACTATTTAAAGGCGAAAGGCCTATTTAATTTAAGGGACAGTT
TTGCAACATCACAGAAGAGTCATTTAAAGATTAAAAATTTGGAAAAAATATCATAACAAA
AAAAACCTACTTCAGCTATTCGAAGGGGGTAAACTTAATTGAAGCTCAATTAAAAACATC
GAACTGTTG
(4749 bp)

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