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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoASG_c29245_g4_i1
Scaffold_idBomo_Chr11
NCBI non-redundant
(nr)		uncharacterized_protein_LOC101735722_[Bombyx_mori]
Ontology
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005634 C nucleus
GO:0005703 C polytene chromosome puff
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006979 P response to oxidative stress
GO:0007275 P multicellular organism development
GO:0007310 P oocyte dorsal/ventral axis specification
GO:0007317 P regulation of pole plasm oskar mRNA localization
GO:0007350 P blastoderm segmentation
GO:0008103 P oocyte microtubule cytoskeleton polarization
GO:0008340 P determination of adult lifespan
GO:0008359 P regulation of bicoid mRNA localization
GO:0042070 P maintenance of oocyte nucleus location involved in oocyte dorsal/ventral axis specification
GO:0043565 F sequence-specific DNA binding
GO:0045450 P bicoid mRNA localization
GO:0045451 P pole plasm oskar mRNA localization
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046982 F protein heterodimerization activity
GO:0048813 P dendrite morphogenesis
GO:0060322 P head development
GO:0060465 P pharynx development
Transcript
Level		FPKM:5.15 TPM:3.95
ORF EntryO_BomoASG15893_complete:A_BomoASG_c29245_g4_i1
Sequence
(Nucleotide)
GACACGGTCGAAGATATAACTTGTATTTTGATAATTTAAAACAATTAACGAGAATTGAAA
ATAAAAATACAATCGACGGGTCCAAAGTTTAGTTTATTAACTTTAGTGTTGCATTACAAA
GTGAAATTCGCCTAGACGAGTGTACGTGAAGTTTTAAGTGTTTACGGAGACGAAATTAGA
CAGTGCTAGTTAATTATTACAGTGCTTTTTACCATTATTTCGTTTGTAACAAACCGCTTT
CGGAGGTAGCGGTCCGTAACCTCTATACGTACTGTGGCAGTCACTTGAAAGAAATTTATA
ACGCAAACTGCCACAGTACTAGAAGTGATTAGAAAAGTCAAGTGAAAAATAAAAGTGAAT
AAACAAATTGAAATAAAAAAAAAAAACTTTTTTGGCTCTATCCCAACTGACTCAGTAGTG
TGCATCAAAATGTATACGTTTACGCTGAAATGGTACTTTTCGGGGCGAAAGTGACAAAGA
ACCAAGATGTCTCCCGATAAACGCAAAAGGAGGATCGGAGAGGAAATTCATTTTAGTAAC
AAAATAAGGACTCGTATATAAAAGCCCCAAATATCATATACATATTATAAATAAATATAT
CTGATCTCAAAATATCTTAGTGCTCAATATTAGTTTATTCTAATACAATTTTGATACATC
GAAAATGATCGCCCTGAAGAAACTATATGGCGACGAGCTACTTCGCCTGGCTCTGGTTTT
GAGTTTGCTCAGGATCGACCCAGACGACTACCTCGAACGGGAGACCCAGTTGCTGGCCGG
TCTGCACATCGCGAACGGTTCCGACCTGTCCCCGGAACAGGAGGCCCGGACGCTGATACG
GCCGAGGTTCGTCCACCCCAAGTCCCTGGACAACATCCTCGTGAACTACGAGAGGCAGCT
GTTTGAAGAGCTCAACTCCTTGGGCCGGTACGGTCCAAGCGCACATAATGCCCGGATGTG
GCAGAACCGTGGCCCGATTCTTCATACATATTTATTGAACGATGTCGCAACTGGCGCAGT
CGAACCCGTGTCAGCGGCCCAGTCGGTCGCAACCGACCAGGACGCCGTCTCGGCGGACGA
CAACGTCGCCCAGGAGGTCAAAGTGACCGACGAGGACGCCCAAGACCAAAGTCGCGAGTC
CACGGTGACGGTGTCGGACAACTTCCTCCACAATCGCACCGAATCGGATATATTTCCGGA
GATCGCTTCCAGAACCTTCGACGTGACCGAGTTCCTGGTGCAGCAGGACAATATGCAAAT
TAAAAAGGAACAGGACGAGGCTTTCGACCTCAAGGTCAACGAATCGAACACCGATGACTT
TTACAGTGACAACGCTATCGACTTTGCGACTTATTTTGCTGCAAGATCCGAGAAGATCGA
GGTGGAGGAGCCTAATTTATATCACCAGAATATGGCCGACCTTCAAGATTATGGGGACGT
CTTCACCGACGATCCGGACCTCAAACACGACCTGGAACTAGACATAAAACAACAGCAGGA
GAACTTGGAACAGTATCTCCTTGAGAACACTCCTTTGGAAGCGGAGGTCTATGAATTGGC
TCCAATGTTTGAAGAGGAACTGGTGTTGGACGTTAAGAGGGAAAGAGCTAGCACTAGTTT
CACGTCGGCCAGTTCGAGTGGCGTGAGCGAGATGGACATATCCGACGTCAAAACCGAGCC
GTTGGACTATAATGACGTCAAGGTCGAGCCTGATGAGGGGAACCATACTGGAGATGAACT
GACGCAAGAGGACATGGATCTCATCGAGGTGCTCTGGAAGCAGGACGTGGACATGGGATT
CTCGCTCGAAGATCCAATACAGCCGGAAGGTCCGCAAGCCACGAAGGTATTGGGGGAGGA
AATCGACAAGGAACTGCTGAAGGCCAAAGATAGGATCCAGAAGAACTATGAAGATGAAGA
GCTGAAGAAGGTTGAGATAGAGAAGGTCAAGGCTTCGTTGTTGGATCCCGAAGTCAAAGA
GGATGATCCCTGGGCTGGCCTATCCTACACCGTCGACACGGAAACCGGCGAATACGTGAT
CCAAGGAGAACTGCCCAGGGAGCTGGTGAGCGGCGAGGAGTCGCGCTTCGATTTGCTGGA
GGAGGCGCTTCAGCTGGTGGAACTCGGAGACGGCGCTGAAGCCAAAGATGAACCCACTGA
GGCGGTAGAAGGGAGTAGCACCGATCGCAGGAGCACCATGTTGCACCCTGCCATGCGGCA
TGTCCCGCACCACCCCCTCGCCCATTACCACAACCAGTCGTTGATGCGGTCGATGTCGGT
GGAGCAACGCTGGCAGGACCTCGCCTCTCTGCTGACCATCCCGCCGCCACCGGAGCAGTA
CCAACACTACCACCATCACCACCAGCACCCGCACAACATCAGCGCCCATGGAGCGGCCGG
CTATGCTCCGAACTACCACGGACCTCACGGACCCCACGGACCTCACGGACCTCACGCTGC
TCACGTGCCGCACGCGCCGCACGCACCCCTCCCGGCTCCGGTGGCCGATAAACATCCGGA
TGCGTACGTAGGGGCAACTGCTCCCATAGAAGGGGGGTACAAAGTTGAGAGTACTCATCC
CTCGCAACAGCAGGATGGAGTTTATTATCAGAACACGCCCGCCGAGATGCCGGGGCCAGT
CAACCAGGACGGCTTCCTCCAGTCGATCCTCAACGACGAGGACCTGCAGCTGATGGATAT
GGCGATGAACGAAGGAATGTACACAATGCGAATGCTGGACGGGGCGAGCTCCCACCACGG
CCCCCACCACAACCACTCCCACATGATGGTGCCAGAGCGTGATTCCGCATCAGACAGTGC
CGTCTCCTCGATGGGCTCCGAACGCGTGCCTTCGCTTTCGGACGGCGAATGGTGCGACGG
TAGCGATTCCGCCCAAGAGTTCCACAGTTCCAAATTCCGCCCATTCGAAAGCTCTTACGG
CAGAGAGCGCTCCGCCTCCCACCAGCCCCAGAAGAAGCACCACATGTTTGGGAAGAGATG
CTTTCAGGAGCAGCCGCCGCCTCCCATGGAGCCGGTGCAGACGCAGCGACCTACTCCCGT
CAAGTACGAGTGTCCGGAGCAGGCTTACCACCACGAGGGCCTGCACATGCACAACGATTT
CGGAGGGCGGCACCAGGTCGCTCCGCCCCACGTGGCGGGTCTGCAGCCGGCGTTAGAGCT
GAACGCGCCCCACTCCAGCCACGCCCTGCTCCAGGGCGCCGTGGGGCCGGGGTTCGGAGT
CCCGGAGCGCGTGCGGCACAACCACACGTACAGCGCGCCCCTCGCCGCGCCCCCGCACGC
CCCCACCGTGCGCGACAAAAGGGTTCGCCGACTCACCGACGGTAGCGCTTCGGACGGGGG
CTCATCATGCACCAGCGCGCAGCATCTGTCCCGAGACGAGAAACGGGCCAAGGCATTAGG
TATCCCCCTCGAAGTCCAGGACATCATTAATCTGCCCATGGACGAGTTCAACGAGAGACT
GTCGAAGCACGACCTCAGCGAGGCGCAGTTGTCGCTGATCCGGGACATCAGGAGGCGGGG
CAAGAACAAAGTGGCAGCACAGAACTGCCGGAAACGGAAACTGGACCAGATAACCTCGCT
CGCGGACGAGGTCAGGACCGTCCGGGACAGGAAGCTGAGGACCCAGAGGGACCACCACAG
TCTGCTGGCCGAGAGGCAGAGGCTCAAGGAGAGGTTTGCGGCCCTATACCGACACGTTTT
CCAGAACCTCCGCGACCCCGAAGGGAGGCCGCTGTCCTCGGGCCAGTACTCGCTGCAGCA
GGCGGCTGACGGCAACGTGGTCCTCGTGCCGAAGATGCCTCAACACCAAGATCACCCGAT
GAACAGGACTTCGGATGATGAGATGGAGAGGAAAGCCAAGCACTACGACCAGTGACACAT
GGCCGCGCTCCGCCGCGCCGCTGCCTCCCAGCGAGGGGTCTACTCTTAAGTGCGGCCAGA
ATTATCTGACTGACAGAACTATCTAAAAGACACCTGCCAAAATTGACAGCTGTCAACCGT
AGTATTAAGGCGCGGACGGGCAAAGGGTAATTTAGTACATACGTCATTTTGTATATATAG
ATCGGTTTCGCGGGACGTATCGCCGTCCCTCTCGCACCTACACCACCCTCCACCACTATT
ATTGGAAGCGTAGGTTTTTGATGCGACCTAATATCGACCTTAAGCATTAAGGCACAAGTA
ACAAATTGGTTTAACGTTGTACAATTAATTTTATGATTCGCTTCCTATTCATTTCTAATA
TAACATATTATTATGTGCTTAAAAAAAAGTCTGATTATTTTTATTGTTGATACCCACGTC
ATTATGAAATAGAAAAGTATTTGAAAAACAGATGAGAAAATTTCATCATGCTTTATCTTC
ATCAGCTTATTACATTACACAATGTAAATTATATGCTCTCAATGATATTACTGCCAAATT
AGATTTTGGGATGCAACCTTTGTTTGTTGAAATTATTATGCGAGGGAAAGGGATGGCGAT
ATAAGTCTTATTCATTCGGTAAATTCCGACGATTTTAGTATACATATTAAATTGAGCTTT
GTGTGCGAGCAACACGGGTTGTATTTGTAGCAGAAGCGATGCACGGCGCAATGCAATACA
AACTCGACTGACGGGGTGAACGACCTCATAGGATTCGCTTTTCATTGCGCGTTAACTAAC
CGCTATAGTCTCCCTGAACTGTATATGTCAGGGGCGCACGAACTATTTAAAGGCGAAAGG
CCTATTTAATTTAAGGGACAGTTTTGCAACATCACAGAAGAGTCATTTAAAGATTAAAAA
TTTGGAAAAAATATCATAACAAAAAAAACCTACTTCAGCTATTCGAAGGGGGTAAACTTA
ATTGAAGCTCAATTAAAAACATCGAACTGTTG
(4892 bp)

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