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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoASG_c29241_g1_i3
Scaffold_idBomo_Chr5
NCBI non-redundant
(nr)		negative_elongation_factor_D_[Bombyx_mori]
Ontology
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0005703 C polytene chromosome puff
GO:0005705 C polytene chromosome interband
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007070 P obsolete negative regulation of transcription from RNA polymerase II promoter during mitotic cell cycle
GO:0008023 C transcription elongation factor complex
GO:0017053 C transcription repressor complex
GO:0022008 P neurogenesis
GO:0032021 C NELF complex
GO:0034244 P negative regulation of transcription elongation from RNA polymerase II promoter
GO:0045892 P negative regulation of transcription, DNA-templated
Transcript
Level		FPKM:14.73 TPM:11.30
ORF EntryO_BomoASG15875_5prime_partial:A_BomoASG_c29241_g1_i3
Sequence
(Nucleotide)
CTCCATGGTACAAACCAATTCATTTTTCATAATAGTAAAAATTAAAATGTTGTTTAGTTT
GAAAAAAAAGGTTTTTTTCATATTTAATGAATATTAGTTGTTTTAACTTTGATAATCAAG
GGCCTCAGCATCATAAATTTGTTGTTTGTTTAAAGCTAAGTTGAGTGCAACTTAATATAC
AACCATGCCTAGTCAGTATGAGGAAGAACGTGTATGGGATGGTCAGAATCATAATAATCA
ATATGAAGAAGAAGGAAATGAAGATGTTATTGAGAACCCTGAAGAGGTATTAAATGAATG
TCTGGAAAAATTTAAAACTCCAGACTACATTATGGAACCTGGTATTTTTGGTCAGCTTAA
AAGATACTTCCAAGCTGGTGGAAATCCAGAGCAAGTTATTGAACAACTGTCAATGAATTA
CAATGCTGTAGCTCAGATGGCCAACTTATTAGCTGAATGGCTTATCCTTGGAGGAGTTAA
AGTTAGTGAAGTCCAAGCTATGGTTGAAAATCATTTAAAAGACATGATTCTAAAAACATT
TGATCCCAAAAAAGCTGATACAATATTCACTGAAGAGGGAGAGACACCAGCTTGGCTTAC
TGAGATGATTGAACATCCTACTTGGAGATCTTTAATTTACAGACTAGCCGAAGAATATCC
AGATTGTCTAATGTTAAATTTTACTATAAAGTTAATTTCTGATGCAGGTTTTCAAGGTGA
GATAACAAGCATATCAACAGCTGCACAACAAATCGAAGTATTCTCCAGAGTACTCAAATC
AGCTATTGTGGGTTTCCTTCAAAGTTCAGATGATTGGCAAAACAGTGTTAATGAATGTGC
TAAAATGGTTTGTCATGGCGCGCACACATACGTTTACAGTCAAGTTATTGTTCACATTCT
CTCACAAGAGCCAAGAGGTGGCGCTATTATGAAGAGGTTGAGCCAGGAAATAACTCGTTG
TGCTCAACAAGGTGGCCACGATGTGACCCCAATAACACTGGCCTTGACCTCTGGTGAGAG
TTGGCGCAACGCTCGGACGGCACTTGCAGCCATGCTATCGAGGGGCGCCCTCAATCCGGC
TGATATCTCGGTGTTGTTCCGCGCTTACACGCAACCAGACTCGCCACCGGTTCATTTACT
TAGGATACCACAGTTTTTGGAACTACTCGTTGATTCATTGTTCAAATTGGGAAGCAAACT
GAATCCGGAACACAAATCCAAATATATGTATCTTTTGGCATACGCTGCTAGCGTTTGCGA
AAGTCCGAGTCCCGGTAAACCTGTTAAAGACGAACTAAAGGCCACTGTGCAAGCTATTGA
AAAAGTACATGCCGTGTGCAGCAGCTCTGCTAGCTCCAGCGAACTCATCGCCGAATTACC
TACTCTATACCATTGTATAAGATTCCCCGTAGTCGGTATGGGAGTTTTAGTTTGGGTGGA
GTGTGTTGTGACCGAACCTTCGTATTTCAAACTCTGTACAGAACATTGTCCTTTGCACCT
GGCGCTATTAGACGAGGTCGCGTCTTGTCATCCACTGTTGCATCACAGGCTCTTGAGATT
ATTAGTGAAACTCTTTGAATCGCCACAAGACGAACTAGAGATATTAGTCCAGCTTGAATT
GAAAAAGATGCTTTTGGATCGAATGGTGAATTTATTAAGTCGCGGTTGTGTTGTCCCCGT
TCTTAGATACATTAAACAGTGCTGGCAGCGCGGAGATACAGATATTTCGTTGATTAGATA
CTTCATAACTGAGGTTTTGGACGCAATAGCACCGCCGTACACGCCCGAGTTCGTACAACT
TGTCCTACCCATGGTAGAGAATGAAGAAATAACCGGAACGATGAGAGCAGAAGGTGAAAA
CGATCCAGTTTCTGA
(1875 bp)

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