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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoASG_c29216_g1_i3
Scaffold_idBomo_Chr25
NCBI non-redundant
(nr)		cysteine_protease_ATG4D_isoform_X1_[Bombyx_mori]
Ontology
GO:0000045 P autophagosome assembly
GO:0000422 P autophagy of mitochondrion
GO:0004197 F cysteine-type endopeptidase activity
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005759 C mitochondrial matrix
GO:0005829 C cytosol
GO:0006501 P C-terminal protein lipidation
GO:0006508 P proteolysis
GO:0006612 P protein targeting to membrane
GO:0006810 P transport
GO:0006914 P autophagy
GO:0006915 P apoptotic process
GO:0008233 F peptidase activity
GO:0008234 F cysteine-type peptidase activity
GO:0015031 P protein transport
GO:0016485 P protein processing
GO:0016787 F hydrolase activity
GO:0044804 P autophagy of nucleus
GO:0051697 P protein delipidation
Transcript
Level		FPKM:14.49 TPM:11.12
ORF EntryO_BomoASG15779_3prime_partial:A_BomoASG_c29216_g1_i3
Sequence
(Nucleotide)
AAAAGACCGGCTGTATGAGCATCGCTTCCTTTAATTGTATAATGGACAAATCAATGTAAA
AAAGAATACATACTACCTACTACTTCAACTTCAATGCTGTGTAGTGTGTGCGTAAACGGC
AAATATAAAATTATTAAAAATTTAGGCCATATGAACCAAAGGGTAAATTTACCAATTGAA
ACTTGTGAACTGCATCGTTTAGACTGCCTTCTACTATGCATTCAAATAAATCTGGACGTG
TTTGAGAATGAAATCATAGTGAAACCATGTTGATAACAACATTTTTTAATGTACCATAGT
TCTCATTGTCAATTGCAATGAATGGTTCAAGCGGTTTCAGTATTCCGAGTCATGAACTAA
ACGATTTAAATAATGGCCTAAGGCAAAGTTCGTCCTCTTCGAAGGTAAACAAAGCACCTC
ATACCCCACTGACAAACGCTCGAGACAATGCTGAAGATTCAATTGATCTCAAAGGTAAAG
TGGAATCACGATTATTATCTATGTGGAACAATGTAAAATTTGGATGGACAGTAAAATTAA
AAACAAACTTTTCTAAAGAATCTCCGGTTTGGTTGTTGGGCCGATGTTATCACCGAAAAT
TAAGCCCAACTGGCTCACTGGAATCTTCCACAGAAGTGGGCATGGAAGCAACTGCACATC
AACCAATGGAACAAATATATGGAGAGGGTATAGAAGGATTTAAATCAGATTTTGTAAGTA
AAATATGGATGACTTACAGAAGGGAATTCCCTACTATGACAGGTTCAACTTTTACAACTG
ATTGTGGTTGGGGTTGTATGCTTCGAAGTGGACAAATGATGTTGGCTCAGGCTTTAGTTT
GCCATTTCCTAGGCCGTTCATGGAGATGGTTACCTGAGAAACCCATTCAAAATGCTAGAG
AATTTCAAGAAGATTGTTTACATAGAAAAATTATAAAGTGGTTTGGAGATAAGTCTTCAG
TTAATAGTCCTCTGTCAATACATCAGATGGTGAGTTTGGGAGAAGCTTTAGGCAAGAAGC
CAGGTGATTGGTATGGCCCTGCAGATCGGAAG
(1052 bp)

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