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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoASG_c29121_g1_i1
Scaffold_idBomo_Chr4
NCBI non-redundant
(nr)		transcription_initiation_factor_IIB_isoform_X1_[Bombyx_mori]
Ontology
GO:0001174 P transcriptional start site selection at RNA polymerase II promoter
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006352 P DNA-templated transcription, initiation
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0006367 P transcription initiation from RNA polymerase II promoter
GO:0008134 F transcription factor binding
GO:0008270 F zinc ion binding
GO:0017025 F TBP-class protein binding
GO:0046872 F metal ion binding
GO:0051101 P regulation of DNA binding
GO:0097550 C transcription preinitiation complex
Transcript
Level		FPKM:24.99 TPM:19.17
ORF EntryO_BomoASG15521_5prime_partial:A_BomoASG_c29121_g1_i1
Sequence
(Nucleotide)
CTTCCGATCTCCACCATGGCGAGTACATCGAGAATTGAGGCGAATAAAGTGGTTTGCTAT
GCTCACCCTGATGCGCCCCTTATCGAGGATTACAGAGCGGGTGATATGATATGTTCTGAA
TGCGGTTTGGTGGTCGGAGACAGAGTCATAGACGTCGGTTCGGAGTGGCGTACTTTTAGC
AATGAGAAGTCTGGAGTAGATCCGTCTCGTGTTGGTGGTCCTGAAAACCCACTTTTATCT
GGAGGTGATTTGTCAACTATCATTGGGCCAGGACGAGGAGATGCATCATTTGACAGCTTT
GGAGTTTCCAAATATCAAAATAGAAGAAACATAAGCAGCACAGATAGAGCCTTAATCAAT
GCATTCCGAGAAATCAACACAATGGCGGATAGAATTAATCTTCCAAAAACTATTGTGGAC
AGAGCAAACAATCTTTTTAAACAGGTTCACGACGGTAAAAACTTGAAGGGTCGTGCCAAT
GATGCTATAGCTTCAGCTTGCCTCTACATTGCTTGTCGTCAAGAAGGTGTGCCACGTACA
TTTAAAGAGATCTGTGCCGTCAGCAAGATAAGTAAAAAAGAAATAGGAAGGTGTTTCAAA
TTGATTCTGAAAGCACTGGAGACTTCAGTTGATCTCATTACAACAGCAGATTTTATGTCT
CGGTTTTGCTCGAATTTGGGTCTGCCAAATTCAGTGCAACGCGCAGCTACACATATCGCA
AGGAAAGCTGGAGAGCTGGACATAGTGTCTGGAAGAAGTCCTATTTCAGTTGCTGCAGCT
GCCATTTATATGGCTTCACAGGCATCAGAAGACAAACGCAGTCAGAAAGAGATCGGCGAT
ATTGCTGGTGTTGCGGACGTTACGATCCGACAGTCTTACAAATTGATGTATCCATCCGCA
GCAAGACTGTTCCCTGAAGATTTCAAATTCGCAACTCCTATTGAATTCCTACCACAGATG
TAGACTACATGTTTTTGTACTATTAGAATTGCTTTAAAATGTATGTGAGCAGTCTGAAAA
ATCTTGTAAGTTTTCTTAATGTTATAGTTTGTTAATATGTCCTAACTGGATGACTCTTCT
TGAGAAGAATTCTCATAAAGATATGCCAGATCGGAAGAGC
(1120 bp)

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