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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoASG_c29108_g1_i3
Scaffold_idBomo_Chr24
NCBI non-redundant
(nr)		LOW_QUALITY_PROTEIN:_spectrin_beta_chain,_non-erythrocytic_2_[Bombyx_mori]
Ontology
GO:0000165 P MAPK cascade
GO:0002046 F opsin binding
GO:0003779 F actin binding
GO:0005088 F guanyl-nucleotide exchange factor activity
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0005875 C microtubule associated complex
GO:0006888 P endoplasmic reticulum to Golgi vesicle-mediated transport
GO:0007030 P Golgi organization
GO:0007041 P lysosomal transport
GO:0007411 P axon guidance
GO:0008022 F protein C-terminus binding
GO:0008091 C spectrin
GO:0016020 C membrane
GO:0019894 F kinesin binding
GO:0030036 P actin cytoskeleton organization
GO:0030507 F spectrin binding
GO:0030863 C cortical cytoskeleton
GO:0032029 F myosin tail binding
GO:0032391 C photoreceptor connecting cilium
GO:0034452 F dynactin binding
GO:0043547 P positive regulation of GTPase activity
GO:0043621 F protein self-association
GO:0045179 C apical cortex
GO:0045505 F dynein intermediate chain binding
GO:0046982 F protein heterodimerization activity
GO:0051015 F actin filament binding
GO:0051260 P protein homooligomerization
GO:0051693 P actin filament capping
GO:0070062 C extracellular exosome
GO:0097381 C photoreceptor disc membrane
Transcript
Level		FPKM:5.66 TPM:4.34
ORF EntryO_BomoASG15504_complete:A_BomoASG_c29108_g1_i3
Sequence
(Nucleotide)
TGGAATGATGGGTCGGCGTGTTCTCCCTCTCATTCGGTCAGTACGCGATTGAATTCCGTC
GCGGTAACACGTGTCGCGGCCGCCTTACCAAACTCCCGGGACAGAGCGCATCGGATGCGC
GCGTGATGTTTCAAAAGTGATTAGTGCCTTCACGAATCTGATATTCGTTAATGGTTCTCG
CGATTACGAACAAGGAAATAAGCTTGTGGATTGTCTTCAAATAAAACTTGGAATACCCCT
TCAATACTTACAACGTAAAAACAGTTAAAAACAAAGAAAAAACGTACTACCAACAAAAGG
ATCAGTGTTAGAAGTGACAGTGACAGTGACAGTGTCACGAAACGGATGTGACAAAAATGC
AGAGACAGTTGAGCAATGTCAGTTTTCATTCTTACCAGGACTACCAGCCTAGCAGGCGTT
ATGGGCCGCAGTATGAGCCTGGAGGCTACGCCACGGTAGTACAGCAACGTACCAACATGA
CCCAGAGGGAGGACGCCCTCAAATTCGAGCAGGGCCGCATCAAGGCCCTGCAGGAGGAGA
GGTTGCACATCCAGAAGAAAACCTTCACGAAATGGATAAATTCGTTCCTGCAGAAGGCCC
GGATGGAGGTGGAGGATCTATTTGTGGATTTGGCAGACGGGCGGCGCCTCCTCAAACTCC
TGGAGATCATCAGCGGGGAGCGTCTGCCGCGACCCAACACCGGCAGGATGAGGGTCCACA
AAATCGAAAATGTCAACAAAAGCTTGAGTTTCTTACACACAAAGGTGCGTTTGGAGTCTA
TCGGAGCTGAAGACATCGTGGACGGGAACCCTCGACTCATCCTCGGCTTGATCTGGACCA
TCATCCTGCGTTTCCAAATCCAGGAGATCGAAATCGATGTGGACGAAGAGAATGAGTCTT
CCGAGAAGAAATCCGCCAAGGACGCCTTGCTGCTGTGGTGCCAACGCAAGACGAGTGGCT
ACCACGGAGTCCACATCCACAACTTCACTGACTCGTGGAGATCTGGGCTTGGTTTCAACG
CGCTCATACATGCTCACAGGCCCGACCTCTTCCGCTGGACCGAGGTGCCGGTCGCTGACC
ACGTGGAAACCCTCAACCACGCCTTCGACGTCGCCCACAAGCACCTCGGCATCCCCAAAC
TCCTGGACGCTGAAGATGTGGACACGACCAGGCCTGATGAGAAGTCGGTGATGACGTACG
TGGCTAGTTACTATCACACGTTCGCTCGTATGAAGAATGAACAGAAGAGTGGTAGGAGAA
TTGCCAATATCATCGGTCAAATGATGGACTGTGATGAGAGGAAGGGTGAATACAGCCGGC
TGGTCACCGCGCTCTTGGAGTGGATCCGACTCAAGATCGAAGAGTTGAATGACAGGGAGC
TGCCCAACTCTCTGGATGGAATTCAGCGTCTGCTACTTGGCTTCAAGCAGTACAGGACCG
TCGAGAAACCTCCCAAATACAAAGAGCGATCGGAGATCGAAGCGTTATATTTCCACATCA
ACACGATGCAGAAGAGTCTGGTGGGAGAACCCTGGGCGCCACTGGAGGGACAACTTCCTC
AAGATCTGGAGCGAGCCTGGCAAAGATTGGAACAGGCCGAACACGCGAGAGAGATAGCGC
TCAGGACCGAACTGCTCAGACAACAGAGGCTCGAACAACTCAATTACAAATTCAATACTA
AGTCGGTCCTGCGTAAGGGCTACTTGAAGGAGATGATCCAGGTCCTGTCGGACCCTCGCT
ACGGCTCCAACCTGGCCCAGGTCGACGCCACTGTCAAGAAACACGAGGCCATATCTGCGG
ACATCTTAGCAAGAACCGAACGCTTCGAGGACTTATCGGCAATGGCGGCAGAACTGGTCA
GGGAGAAGTACCACGGCGCGGAAGCCGTCTCCAGGACCGAGCAGGCGGTCCTGCAACGCT
GGAGGGAGCTCCTGGAATTGCTGGAGAGACATAGAGTGTCTCTGGGCAAGCTGGCCAGAC
TTATGGCACTACTGAGAGAAGCTGATGCCGTGAAACATACGCTGGTTGAGATGAAGACCC
AGTTCCAATCGGAGGAAGTCGGCAGGCATCTGTCTGACGTGGAGAGGCTGCTGCAAGCGC
ACGCTCTCCAGGAGTTGCAGCTGGGCGCCGCGGACGAGAGCCTCAAGCGGCTCGTGCGGC
TGGCGGCCGGCGTGGACGGCCCCGCGCAGCCCCAGGCTCAGCTGCAGAAGCAACTAGAGC
AACTGCAGGAGGCTTACGACAGCCTGCTGGCGGCGGCCAAGGACCGTAAGGCGAGGTTGG
AGGACGCTCGTAACCTGTACCAATTCCTGGAGGACCACGAAGAAGAAGAAGGTTGGGTGA
CGGAGAAGCAGCGCATATGTCGCACCGACGTCGCCGCCAAGGACCTGAGAGGAGTGCTGG
CGCTGAAGCAGAAGCACACGGGGCTGATGCACGAGCTGAGGGCCAGGGAGCACGTCTCCC
AGCGACACAAGTCCAAGGGTCAGAGCCTCATAGACGCCGGTCACCCGAAGAGCGCCGAGA
TCGAGCGGCGCCTGACCTCGCTCAGCAAGCAGTGGGAGACGCTCAGGGACCTGGCTGCAG
CACGAGAGAAACAACTGGCTGACGCTGCAGAGGCTCACCAGTTCTACGGGGACGCGAACG
AGGCGGAGTCCTGGATGAAGGAGAAGCGTCCGCTGGTGAGCACCGCGGACTGCGGGCAGG
ACGCCGCCGGCGCCGCCGCCCTGCTGGCCCGCCACCGCGCGCTGCACGACGCCATCCGCG
CGCACCACGCCGAGCTGCAGACCCTCGCCGCGCACGCAGCCCGCCTGCAGCAGGCCGGCA
TACAGTGCCTCCAGTTACCAACGGAAGTGGAGTCCACTCAGGGCATGGAAGACGAGGAGT
GGGTGAACGAGTCCAGGCTGGTGCCGACCGAGGTGTGGGAGGAGGAGCCGGTCGAGAGAC
TCGAGCACAGGACCGTCACCGAGGAGAGACAAGTACCGCAGGTGAAAGCGCTGTACCCAT
TCACGGGCCAAGGGATATCGATGCAGAAGGGCGAGGTCATGTTCCTGATCAACAAGACGA
ACCCGGACTGGTGGTCGGTGCGGAAGGCGGACAGGACCGACGGCTTCGTGCCCGCCAACT
ACGTGCGGGAGATCGAGCCCAGGGTCGTGCCGGTCCAAGTCCGCAGACCAGAGAAGGTGA
GGACGGTTCAGCGCGTGAAGAAAACGGTGCTGGTGAAGCAGGTGGTGCCCGTGAAGAGGA
ACAAGCCGACCGCCAGGAGGGCGTCCAGGGTCCAGCAGAAGGTCGTCACCGTGGCAGCCA
GGATGGCGGACATACAGAAGGACTACGACGAGTTGGTAGCGTTGTCGTCTGCGCGTCGTG
AACAACTCGAGGATGCCATAAAGCTGTACAGCTTCTTCGCCGAGTGCGATGACTTTGACA
AGTGGATGAAAGACAAGGAGAAGTTCCTCAAGTCTGACGACGGCGAGGAGAGCGTGGACA
CCGCCAAGAGGAAGTATGAGAAATTCGTGACCGATCTGTCGGCGGCCTCCAAGCGCTTGG
AGCACATCGACGAGGCTGCCGAGGAGCTGGTCTCCGCCAGGCACGGGCAGGCCAGCAAGG
CGGTCGCCAGGAAGCAGCAGCTGCGCCAGCAGTGGGATAAACTACTGCGACTGAAACAAC
AGAAGGAGAAGAGCCTGGAGGGCGCGTCGAGCGTGGAGTTGTTCAGCCGCACCTGCGACG
AGGCTCTGGAGTGGATGGCGGAGAAGGAGCAGCAGCTGGCGGCCGGGCCGGGCGCCGCCA
GCGACCTGCGCACCGTGCGCGCGCTGCAGCGGAGACACGCCCAGCTCGAGCGAGACCTGC
AGCCGCTCCGGGACAAGGTCGCCACCGTCAGTCTGCTAGCCGACTCAGTGAAGTCCCAAT
ATCCGAGCGAGAGGGCTAATGTGGAAGCGAGACAGAGAGAGCTTCAGCGCGTCTGGGAGA
GGTGTCGGCAGCAGGCTGATGAGAGGAGGGACAGGCTGGAGAGCGCCGTGGGGCACCAGA
TATTCGGGAACAGTAGCGCCCAGCTACAAGGCTGGCTGCAGAAAACGAGAGAGCAGCTAG
CGCAAGAGGCCACCGCCAAGGACGTCGCGACGGCCGAGGCTCTGCACGACCAACACAAGG
AGCTGCTGGACGACATCAAGACTCATGACGACGAATTCAAGGAGGTGATCGCTCTCGGCA
AACAGCTGCTGTCCAAGAACCCTGCGCTCACGGACGTGGCGGACAAGATCAAGCAGTTGG
AGCAGGACCAGAAGGCGGTCGCCAAAGAGTGGCAAGACAAGGACGCATATCTGAAGCAGC
TGGTGCAGTTGCAGTGCTTCAACCGGGAGGCCGACCAGATCGACGCGTCGTCCGGGGCCC
ACGAGGCTTACTTGGACTACACGCACTTCGGGTCGTCGGTGGATGAGGCCGAGGCCCTGG
TGAAGAGGCACGAGGAGCTGGAGGCGCGGCTGGCGGCGCAGGACGAGAGGCTGTCCGCCT
TCGTGCAGCGGGCTGACGCGCTGCTGGAACTGCCACACTATGCTGCGCAGCACATCGTGT
CCCGTCGCGACGCCGTGCTATCCCGTCGTGACGCTGTGCGCCTGGCCGCCACCGAGCGAC
GCCGCGCGCTGCACGCCAGCCTGGCGTACCAGCAGTTCGTGGCGGCAGTTGAAGAATTGC
AAACTTGGATCCAGGACAAAACGAAGACTGCCAAGGACCAGAGCTACAGAGATTTGGCCA
ATTTGGAGCGTAAACTTCAGAAACACGAAGCATTTGAAAGGGAGTTACAAGCCAACGAGA
AGCAACTCAGGAATGTTGAGAGTATCGGACAGTCTCTGCAGAAGTCGGATCCAGCACGCG
CCCAGGAGGTCAGCGCGCGGCTGGAGTCCCTGCGCGAGGCCTGGGAGGCGCTGGTGGCCG
CCTCCAGGGACAAGGGGGGCAAGCTCCGCCAAGCAGCTCAACAGAGGCAACACCGCAGGT
CTATTGAAGACGCGAAGGCGAGACTGGTGGAGTTGGAGAGGGCGTTGAAAAGCGAAGAGA
TCGGCACCGACTTGAGGAGTTGCAAGCGACTGCTCAACCAGCACCAGACTCTGGAGCAAG
AATTAAGTCAGTGGGAGCAAAAGGCGACGGTGTTGGCTGCTCAAGGTGCCGACTTAGTGT
CGGCGGGGCACTTCGACGGGCCGGCCATAGAGAGGGACAGCGCTGCCTTACTGCGGGCCG
TGACGGCGCTCCAGCCGCCCGCCGAGGCCAGGAGGAAGGCGCTGAACCGAAGTCTCCTGC
ACCACAAGTTCGCTGCCGAGGTAGCCGGCGAGTTGGACTGGCTGTCGGAGCGCAAGGCGG
CGGCGTCGTCGGAGGCGCTGCCCGCGGACCTGCACGCCACCCAGACGGCGCAGAAGAAGC
ACGGGAAGCTGCGCGCCGAGCTCACCGGCCGGCGGCCCCTCATCGCGCGCGTCATCGAGC
AGGGCCGCGGGCTGGTCGCAGAGGGACACCCGCAGAAAGATAAGATCCTGGCTCTTTGCG
AAGAGTTGGAGTCAGCGTATACCGAGGTGTCGGCGGCGGCGGACGCCAGGGCCTCGCGTC
TGGAGGCCGCGCTGAGGGCGCAGCAGTTCTTGCACGAGGCCCGCGAGGTGGACTCCTGGC
TCGCTGACAAGGCGACAGCTCTCTCCACCGACGACGTTGGAGGAGACAGACATCGGGCCA
CTCAACTCTTGACGAGGCATAAGGCTGTAGAGTTGGAACTGGACACGTACGCCGCGATCA
TCTCTGAGATGGGCCACGTGGCGTCGTCGATGCTGGGCTCGGGACACCCGGAGGGCGGCA
CGCTGGTGTCGCGCCACGCCGCGCTGGCCGACACCCTGGCGAGGCTGCAGCGTCTGGCGG
CGCACCGGCAGCACGCGCTGGTCGAGAGCGTCTGCAGGCACGAATACTTGGCTGAGAGCG
AGGAGTTGGAGCACTGGATCCAGGAGCAGTACGCCGCAGCCTCCAGCGAGGACTACGGCC
AGGATTACGAACACTTACTGATCTTACGGTCTAAATTCGATGAGCTCCGTCACCGCGTCG
AGAGTGGAGCGGAACGGTTCAACCAGTGCGAGGAGCTGGCCAAAAAGCTGCTGGCGTCCG
AGAGCCCTTACATCGAGGACATCGAGAAGAGACAGGAGGCGCTGGGAGAGTCGTGGCAGC
GACTGGTGGAGCAGATCCAGTCGCGAGGGTCTCGTCTCCACGCGGCGGGCGAGATCCACC
GCTTCCACCGCGACGTGGGCGAGCTGGTGTCGCGCGCGGCGGACAAGCGCGCGGCGCTGG
GCGGCCGGCCCGCGCCCCGGGACCTGCGCGCCGCCACCGCGCTGCTCCGGGACCACGACA
CGCTGCGCAACGACCTGCTCGCTGTCGACGCGCAGATGCAGGTCTTACAAGAGGAGGGCA
GTCGTCTCCAAAAGCTGTACCCTGGGGGTAACGTGACGCAGATCGCTCTACAGCAGAAAG
CTCTGGCTGAAGCTTGGGAGATGCTGAAGCAGGCTGCAGACGAACGCAAGCACGTCCTGC
TGCAGCATCTACAGCTGCACCAGTTCCTCACGCAGGTGCGCGACCTGACGTCGTGGTGCC
GCAGCGTGGCGGCGTCGCTGGGCGGCGGCGTGCGCGTGCGCGACGCGGTGTCCGCACAGA
GCGCGCGCGCCGAGCACCACGCGCTGCGCGCCGAGCTGGACGCGCGCGACGACAGCTTCG
CGGCCGCCCTGCAGCTCGGACACGACCTGCTCGCCGACAGACACCCCAGCTCCGCCGAGA
TCGAGGAGAAGTGCGGGGCGCTGATGGAGGAGCGTGCGCGGCTGGAGCGCGCGTGGGCGG
CGCGGCAGGTGGCGCTGGACCAGCTCATAGACCTGCACTGCTTCCTGCGCGACGCCAAGC
AGCTGCACGACCTCTGCGCCGCGCAGGAGGCCTCGCTCAGTACAGAGCTGTCCCCTACCA
GCAGCGTCGAGGCCATCGAGCACCAGCTGAAGAAGCACGAAGCCTTCGAGAAGCTGATCG
CGACCCAGGACGAAAAGCTGGCAACATTGAACAGCCATGGCGACAAGCTGCTACAGCAGA
ACCACGTGGAAAGCCAGAGGATCGCTGACGAGCTGCAACTAATTAACGAGAGGAGACAAA
AGCTGTACGAGGCGGCGGCGGCGCGGCGCGCGGCGCTGGGTCGCCTGCGGGCTCGCGCGC
AGCTCGCCCGGGACGCGGCCGAGACTCGCAGCTGGGTCGCGGAGAAGCTCGCCAAGCTGA
CTGCCGACCAACAGCACGGCGAAGTAACAAACTTGGAGGATAAGATCAAGAAGCTGCAGA
AGCACCAGGCCTTCACGGCCGAGCTGGCGGCCAACAAGGCGCGCCTGCAGGAGGTGGAGG
CGCTGGCCCGGCAGCTCAGCCCCGACCCTGAGGTCGAGGAGCAGCTGGCTGAGCTGAGGA
ATGACTGGGCGAAACTCGAAGACGCGACCCGGGAGACTGGTCGCGGTTTGGAAGAAGCCC
AAGACATCCTGGAGTTCAACCAGCACTTGGACAAGTTCGAGGCTTGGATCAGAGACAAGG
AGATGATGGTGCAGGCGCACGAGCTGGGCCGCGACTACGAGCACTGCAGCGCGCTGCTCC
GCAAGCTGGACGACGTGGACAGCGACATGCGCGTGGACGACCGCCGCGTGCGCAGCGTGC
GGGCGCTCGCCGACAAGCTGCTCAACCAGGGCCCCACCCAGCAGGCGGCCACGGTGGCGC
AGCGCCGCGACGCCTTCCTGTCGAAGTGGGCGGCCCTCAGCGGAGCCCTACAGCGGTACC
GGGACAACCTGGCCGCCGCCCTCGAGATACATTCGTTTAACAGAGACGTGGAAGATACGG
CGGAGCGTATCTCGAAGAAGGCGGCCATCTTCAGCAGCACGGAGCGCGGGCGCGAGCTGG
AGGCCGCCCACCTCCTGCGCCGCAGCCACCTGGCGCGCGCCGCCGAGGCCTCCGCCGTGC
TCACCAGGATCCAGGAGCTTCAGGCGGACGGCACCGACCTCGCCACCAGACACCCAGAGC
ACGCTAAAGATATAGAGGAGAGTCTCCGCAACTTACGCGAGGGTTGGGACAACCTGCAGA
AGTTGGCTGAGAGGAGAACCGCGCTGCTAGATGCGGCTATCAACGAGCACAAATTCGATG
AGAACTTAAAGGAATTGGAAGTCTGGGTGTCGGAAGCCGTGAAGCAGATGGACGAAGTCG
AGGACCCGGAGACGATGGCAGAAGCCCAGGCCTTGCTGGAGCTTCACGACGAGAAGAAGG
CCGAAATCGACAACCGCCAGAAAGCCATAGCCTCGCTGAAGAAGGAGGCCGAGCAAACGC
CGGAGAAGCTTAAGAAAGTCGAACACCTCTCCACCACCCTCGACCAAGCCTGGCTGAAGA
GGAAGGAGAATTTGACTCAGGCGCACCAGTTACAGCTACTGAAGGAGCAAGCGAGACAGA
TTGAAGACTGGCTCTCGACTAAGGAGGCCTTCTTGAACAATGACGACTTGGGAGAGAACT
TGGACGCCGTCGAGACCCTCATCCGTAAGCACGCTGAGTTCAGCAAGCTGCTGGAGAGCC
AGATCTGCCGCGTCGACGAGCTGAGGAAGAGCGCTGAGGGCTTGAAGGACCATCCTCTGA
GGGTCAGGGTGGACGACGTCCTCCGCAGGGCCGACAGACTCAAGGAGTCGTGTAAGTCGC
GCGGAGACGTGCTGCAGCAGTCCAGACAGCTGCACCAGTTCCTACAGGACCTGCAGCACG
AGAGGGAGTGGATCGCGCTCAAGATGCAGATCGCCAACGACCAGAATTACAGAGAACTGT
CTAACCTGCAATCCAAGATACAGAGGCACGCCGCCTTTGAATCAGAGCTTGCGGCCAACA
AGGGACGCATCGACGACGTCGCCAACAGAGGGGAGGCGCTTATTGAATCAAAACATTACG
CTTCTCAAGAGATAGCGAAACACGTCGAGGAGTTGGAGAACCAGTGGCAGGAATTGCAGA
CCGCCGCTAAGCTGCGTCACGATCGCCTGCAAGAAGCCTACCAGGCCAGGATCTTCTTCC
GAGGGTTAGACGACTTCACCACCTGGCTGGACGAGGTGGAGGCGCAGCTGCTCAGCGAGG
ACCACGGCAAGGACCTGGCGTCGGTGACGGTCCTTCTGAAGCGACACTCGCGTCTCGAGC
AGCAGGTGTCGAGCAAGGCCGACACGGCGACGCAATTGGCCGACACCGCCCGCCAGCTCG
CCGACACCAAGCACTTCATGGCACAGGAGATACTGGACAGAGCCGACCAGGCCGTCAAAC
GCTACCGCCAGCTACAAGAGCCGATACAGATCAGAAGAGATAATCTAGAAGATGCCGAGC
TTCTCCACCGCTGGGATAGAGACGCCGACGAGGAATTCGCCTGGTTACAGGAACGGGAGC
CCTTGGTGCACCAGGAGGACGCCGGCTCCTCGCTCCCGGAGGCGCAAGCTCTGCTGAAGA
AGCACCTGTCTCTGGAAGCTGAGCTTATCGCCAGAGAGCCCACGGTCAGCGCCGTGTGCG
GGCGCGCGGCGCAGCTATCCCGGCGAGGTCACTTCGCGTCGGGCGCCCTAGAGGCCCGGG
CGCGCGAGTTGTCGGCGCTCATGCGGTCCCTGCTGCACGGCGCCAGCGTGAGGACCGCGG
CACTGCAACGACGGTGCGACGTGCTTATGCTGGTGTCGGAGGTAGCGGAGGCGCGCGCGT
GGCTGGCGAGATCGGAAGAGCGTCGTG
(9747 bp)

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