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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoASG_c29108_g1_i2
Scaffold_idBomo_Chr24
NCBI non-redundant
(nr)		LOW_QUALITY_PROTEIN:_spectrin_beta_chain,_non-erythrocytic_2_[Bombyx_mori]
Ontology
GO:0000165 P MAPK cascade
GO:0002046 F opsin binding
GO:0003779 F actin binding
GO:0005088 F guanyl-nucleotide exchange factor activity
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0005875 C microtubule associated complex
GO:0006888 P endoplasmic reticulum to Golgi vesicle-mediated transport
GO:0007030 P Golgi organization
GO:0007041 P lysosomal transport
GO:0007411 P axon guidance
GO:0008022 F protein C-terminus binding
GO:0008091 C spectrin
GO:0016020 C membrane
GO:0019894 F kinesin binding
GO:0030036 P actin cytoskeleton organization
GO:0030507 F spectrin binding
GO:0030863 C cortical cytoskeleton
GO:0032029 F myosin tail binding
GO:0032391 C photoreceptor connecting cilium
GO:0034452 F dynactin binding
GO:0043547 P positive regulation of GTPase activity
GO:0043621 F protein self-association
GO:0045179 C apical cortex
GO:0045505 F dynein intermediate chain binding
GO:0046982 F protein heterodimerization activity
GO:0051015 F actin filament binding
GO:0051260 P protein homooligomerization
GO:0051693 P actin filament capping
GO:0070062 C extracellular exosome
GO:0097381 C photoreceptor disc membrane
Transcript
Level		FPKM:10.42 TPM:7.99
ORF EntryO_BomoASG15495_complete:A_BomoASG_c29108_g1_i2
Sequence
(Nucleotide)
TGGAATGATGGGTCGGCGTGTTCTCCCTCTCATTCGGTCAGTACGCGATTGAATTCCGTC
GCGGTAACACGTGTCGCGGCCGCCTTACCAAACTCCCGGGACAGAGCGCATCGGATGCGC
GCGTGATGTTTCAAAAGTGATTAGTGCCTTCACGAATCTGATATTCGTTAATGGTTCTCG
CGATTACGAACACATAAATTTTAAGACATCTTGTTTATACAAAAGAAGGAAATAAGCTTG
TGGATTGTCTTCAAATAAAACTTGGAATACCCCTTCAATACTTACAACGTAAAAACAGTT
AAAAACAAAGAAAAAACGTACTACCAACAAAAGGATCAGTGTTAGAAGTGACAGTGACAG
TGACAGTGTCACGAAACGGATGTGACAAAAATGCAGAGACAGTTGAGCAATGTCAGTTTT
CATTCTTACCAGGACTACCAGCCTAGCAGGCGTTATGGGCCGCAGTATGAGCCTGGAGGC
TACGCCACGGTAGTACAGCAACGTACCAACATGACCCAGAGGGAGGACGCCCTCAAATTC
GAGCAGGGCCGCATCAAGGCCCTGCAGGAGGAGAGGTTGCACATCCAGAAGAAAACCTTC
ACGAAATGGATAAATTCGTTCCTGCAGAAGGCCCGGATGGAGGTGGAGGATCTATTTGTG
GATTTGGCAGACGGGCGGCGCCTCCTCAAACTCCTGGAGATCATCAGCGGGGAGCGTCTG
CCGCGACCCAACACCGGCAGGATGAGGGTCCACAAAATCGAAAATGTCAACAAAAGCTTG
AGTTTCTTACACACAAAGGTGCGTTTGGAGTCTATCGGAGCTGAAGACATCGTGGACGGG
AACCCTCGACTCATCCTCGGCTTGATCTGGACCATCATCCTGCGTTTCCAAATCCAGGAG
ATCGAAATCGATGTGGACGAAGAGAATGAGTCTTCCGAGAAGAAATCCGCCAAGGACGCC
TTGCTGCTGTGGTGCCAACGCAAGACGAGTGGCTACCACGGAGTCCACATCCACAACTTC
ACTGACTCGTGGAGATCTGGGCTTGGTTTCAACGCGCTCATACATGCTCACAGGCCCGAC
CTCTTCCGCTGGACCGAGGTGCCGGTCGCTGACCACGTGGAAACCCTCAACCACGCCTTC
GACGTCGCCCACAAGCACCTCGGCATCCCCAAACTCCTGGACGCTGAAGATGTGGACACG
ACCAGGCCTGATGAGAAGTCGGTGATGACGTACGTGGCTAGTTACTATCACACGTTCGCT
CGTATGAAGAATGAACAGAAGAGTGGTAGGAGAATTGCCAATATCATCGGTCAAATGATG
GACTGTGATGAGAGGAAGGGTGAATACAGCCGGCTGGTCACCGCGCTCTTGGAGTGGATC
CGACTCAAGATCGAAGAGTTGAATGACAGGGAGCTGCCCAACTCTCTGGATGGAATTCAG
CGTCTGCTACTTGGCTTCAAGCAGTACAGGACCGTCGAGAAACCTCCCAAATACAAAGAG
CGATCGGAGATCGAAGCGTTATATTTCCACATCAACACGATGCAGAAGAGTCTGGTGGGA
GAACCCTGGGCGCCACTGGAGGGACAACTTCCTCAAGATCTGGAGCGAGCCTGGCAAAGA
TTGGAACAGGCCGAACACGCGAGAGAGATAGCGCTCAGGACCGAACTGCTCAGACAACAG
AGGCTCGAACAACTCAATTACAAATTCAATACTAAGTCGGTCCTGCGTAAGGGCTACTTG
AAGGAGATGATCCAGGTCCTGTCGGACCCTCGCTACGGCTCCAACCTGGCCCAGGTCGAC
GCCACTGTCAAGAAACACGAGGCCATATCTGCGGACATCTTAGCAAGAACCGAACGCTTC
GAGGACTTATCGGCAATGGCGGCAGAACTGGTCAGGGAGAAGTACCACGGCGCGGAAGCC
GTCTCCAGGACCGAGCAGGCGGTCCTGCAACGCTGGAGGGAGCTCCTGGAATTGCTGGAG
AGACATAGAGTGTCTCTGGGCAAGCTGGCCAGACTTATGGCACTACTGAGAGAAGCTGAT
GCCGTGAAACATACGCTGGTTGAGATGAAGACCCAGTTCCAATCGGAGGAAGTCGGCAGG
CATCTGTCTGACGTGGAGAGGCTGCTGCAAGCGCACGCTCTCCAGGAGTTGCAGCTGGGC
GCCGCGGACGAGAGCCTCAAGCGGCTCGTGCGGCTGGCGGCCGGCGTGGACGGCCCCGCG
CAGCCCCAGGCTCAGCTGCAGAAGCAACTAGAGCAACTGCAGGAGGCTTACGACAGCCTG
CTGGCGGCGGCCAAGGACCGTAAGGCGAGGTTGGAGGACGCTCGTAACCTGTACCAATTC
CTGGAGGACCACGAAGAAGAAGAAGGTTGGGTGACGGAGAAGCAGCGCATATGTCGCACC
GACGTCGCCGCCAAGGACCTGAGAGGAGTGCTGGCGCTGAAGCAGAAGCACACGGGGCTG
ATGCACGAGCTGAGGGCCAGGGAGCACGTCTCCCAGCGACACAAGTCCAAGGGTCAGAGC
CTCATAGACGCCGGTCACCCGAAGAGCGCCGAGATCGAGCGGCGCCTGACCTCGCTCAGC
AAGCAGTGGGAGACGCTCAGGGACCTGGCTGCAGCACGAGAGAAACAACTGGCTGACGCT
GCAGAGGCTCACCAGTTCTACGGGGACGCGAACGAGGCGGAGTCCTGGATGAAGGAGAAG
CGTCCGCTGGTGAGCACCGCGGACTGCGGGCAGGACGCCGCCGGCGCCGCCGCCCTGCTG
GCCCGCCACCGCGCGCTGCACGACGCCATCCGCGCGCACCACGCCGAGCTGCAGACCCTC
GCCGCGCACGCAGCCCGCCTGCAGCAGGCCGGCATACAGTGCCTCCAGTTACCAACGGAA
GTGGAGTCCACTCAGGGCATGGAAGACGAGGAGTGGGTGAACGAGTCCAGGCTGGTGCCG
ACCGAGGTGTGGGAGGAGGAGCCGGTCGAGAGACTCGAGCACAGGACCGTCACCGAGGAG
AGACAAGTACCGCAGGTGAAAGCGCTGTACCCATTCACGGGCCAAGGGATATCGATGCAG
AAGGGCGAGGTCATGTTCCTGATCAACAAGACGAACCCGGACTGGTGGTCGGTGCGGAAG
GCGGACAGGACCGACGGCTTCGTGCCCGCCAACTACGTGCGGGAGATCGAGCCCAGGGTC
GTGCCGGTCCAAGTCCGCAGACCAGAGAAGGTGAGGACGGTTCAGCGCGTGAAGAAAACG
GTGCTGGTGAAGCAGGTGGTGCCCGTGAAGAGGAACAAGCCGACCGCCAGGAGGGCGTCC
AGGGTCCAGCAGAAGGTCGTCACCGTGGCAGCCAGGATGGCGGACATACAGAAGGACTAC
GACGAGTTGGTAGCGTTGTCGTCTGCGCGTCGTGAACAACTCGAGGATGCCATAAAGCTG
TACAGCTTCTTCGCCGAGTGCGATGACTTTGACAAGTGGATGAAAGACAAGGAGAAGTTC
CTCAAGTCTGACGACGGCGAGGAGAGCGTGGACACCGCCAAGAGGAAGTATGAGAAATTC
GTGACCGATCTGTCGGCGGCCTCCAAGCGCTTGGAGCACATCGACGAGGCTGCCGAGGAG
CTGGTCTCCGCCAGGCACGGGCAGGCCAGCAAGGCGGTCGCCAGGAAGCAGCAGCTGCGC
CAGCAGTGGGATAAACTACTGCGACTGAAACAACAGAAGGAGAAGAGCCTGGAGGGCGCG
TCGAGCGTGGAGTTGTTCAGCCGCACCTGCGACGAGGCTCTGGAGTGGATGGCGGAGAAG
GAGCAGCAGCTGGCGGCCGGGCCGGGCGCCGCCAGCGACCTGCGCACCGTGCGCGCGCTG
CAGCGGAGACACGCCCAGCTCGAGCGAGACCTGCAGCCGCTCCGGGACAAGGTCGCCACC
GTCAGTCTGCTAGCCGACTCAGTGAAGTCCCAATATCCGAGCGAGAGGGCTAATGTGGAA
GCGAGACAGAGAGAGCTTCAGCGCGTCTGGGAGAGGTGTCGGCAGCAGGCTGATGAGAGG
AGGGACAGGCTGGAGAGCGCCGTGGGGCACCAGATATTCGGGAACAGTAGCGCCCAGCTA
CAAGGCTGGCTGCAGAAAACGAGAGAGCAGCTAGCGCAAGAGGCCACCGCCAAGGACGTC
GCGACGGCCGAGGCTCTGCACGACCAACACAAGGAGCTGCTGGACGACATCAAGACTCAT
GACGACGAATTCAAGGAGGTGATCGCTCTCGGCAAACAGCTGCTGTCCAAGAACCCTGCG
CTCACGGACGTGGCGGACAAGATCAAGCAGTTGGAGCAGGACCAGAAGGCGGTCGCCAAA
GAGTGGCAAGACAAGGACGCATATCTGAAGCAGCTGGTGCAGTTGCAGTGCTTCAACCGG
GAGGCCGACCAGATCGACGCGTCGTCCGGGGCCCACGAGGCTTACTTGGACTACACGCAC
TTCGGGTCGTCGGTGGATGAGGCCGAGGCCCTGGTGAAGAGGCACGAGGAGCTGGAGGCG
CGGCTGGCGGCGCAGGACGAGAGGCTGTCCGCCTTCGTGCAGCGGGCTGACGCGCTGCTG
GAACTGCCACACTATGCTGCGCAGCACATCGTGTCCCGTCGCGACGCCGTGCTATCCCGT
CGTGACGCTGTGCGCCTGGCCGCCACCGAGCGACGCCGCGCGCTGCACGCCAGCCTGGCG
TACCAGCAGTTCGTGGCGGCAGTTGAAGAATTGCAAACTTGGATCCAGGACAAAACGAAG
ACTGCCAAGGACCAGAGCTACAGAGATTTGGCCAATTTGGAGCGTAAACTTCAGAAACAC
GAAGCATTTGAAAGGGAGTTACAAGCCAACGAGAAGCAACTCAGGAATGTTGAGAGTATC
GGACAGTCTCTGCAGAAGTCGGATCCAGCACGCGCCCAGGAGGTCAGCGCGCGGCTGGAG
TCCCTGCGCGAGGCCTGGGAGGCGCTGGTGGCCGCCTCCAGGGACAAGGGGGGCAAGCTC
CGCCAAGCAGCTCAACAGAGGCAACACCGCAGGTCTATTGAAGACGCGAAGGCGAGACTG
GTGGAGTTGGAGAGGGCGTTGAAAAGCGAAGAGATCGGCACCGACTTGAGGAGTTGCAAG
CGACTGCTCAACCAGCACCAGACTCTGGAGCAAGAATTAAGTCAGTGGGAGCAAAAGGCG
ACGGTGTTGGCTGCTCAAGGTGCCGACTTAGTGTCGGCGGGGCACTTCGACGGGCCGGCC
ATAGAGAGGGACAGCGCTGCCTTACTGCGGGCCGTGACGGCGCTCCAGCCGCCCGCCGAG
GCCAGGAGGAAGGCGCTGAACCGAAGTCTCCTGCACCACAAGTTCGCTGCCGAGGTAGCC
GGCGAGTTGGACTGGCTGTCGGAGCGCAAGGCGGCGGCGTCGTCGGAGGCGCTGCCCGCG
GACCTGCACGCCACCCAGACGGCGCAGAAGAAGCACGGGAAGCTGCGCGCCGAGCTCACC
GGCCGGCGGCCCCTCATCGCGCGCGTCATCGAGCAGGGCCGCGGGCTGGTCGCAGAGGGA
CACCCGCAGAAAGATAAGATCCTGGCTCTTTGCGAAGAGTTGGAGTCAGCGTATACCGAG
GTGTCGGCGGCGGCGGACGCCAGGGCCTCGCGTCTGGAGGCCGCGCTGAGGGCGCAGCAG
TTCTTGCACGAGGCCCGCGAGGTGGACTCCTGGCTCGCTGACAAGGCGACAGCTCTCTCC
ACCGACGACGTTGGAGGAGACAGACATCGGGCCACTCAACTCTTGACGAGGCATAAGGCT
GTAGAGTTGGAACTGGACACGTACGCCGCGATCATCTCTGAGATGGGCCACGTGGCGTCG
TCGATGCTGGGCTCGGGACACCCGGAGGGCGGCACGCTGGTGTCGCGCCACGCCGCGCTG
GCCGACACCCTGGCGAGGCTGCAGCGTCTGGCGGCGCACCGGCAGCACGCGCTGGTCGAG
AGCGTCTGCAGGCACGAATACTTGGCTGAGAGCGAGGAGTTGGAGCACTGGATCCAGGAG
CAGTACGCCGCAGCCTCCAGCGAGGACTACGGCCAGGATTACGAACACTTACTGATCTTA
CGGTCTAAATTCGATGAGCTCCGTCACCGCGTCGAGAGTGGAGCGGAACGGTTCAACCAG
TGCGAGGAGCTGGCCAAAAAGCTGCTGGCGTCCGAGAGCCCTTACATCGAGGACATCGAG
AAGAGACAGGAGGCGCTGGGAGAGTCGTGGCAGCGACTGGTGGAGCAGATCCAGTCGCGA
GGGTCTCGTCTCCACGCGGCGGGCGAGATCCACCGCTTCCACCGCGACGTGGGCGAGCTG
GTGTCGCGCGCGGCGGACAAGCGCGCGGCGCTGGGCGGCCGGCCCGCGCCCCGGGACCTG
CGCGCCGCCACCGCGCTGCTCCGGGACCACGACACGCTGCGCAACGACCTGCTCGCTGTC
GACGCGCAGATGCAGGTCTTACAAGAGGAGGGCAGTCGTCTCCAAAAGCTGTACCCTGGG
GGTAACGTGACGCAGATCGCTCTACAGCAGAAAGCTCTGGCTGAAGCTTGGGAGATGCTG
AAGCAGGCTGCAGACGAACGCAAGCACGTCCTGCTGCAGCATCTACAGCTGCACCAGTTC
CTCACGCAGGTGCGCGACCTGACGTCGTGGTGCCGCAGCGTGGCGGCGTCGCTGGGCGGC
GGCGTGCGCGTGCGCGACGCGGTGTCCGCACAGAGCGCGCGCGCCGAGCACCACGCGCTG
CGCGCCGAGCTGGACGCGCGCGACGACAGCTTCGCGGCCGCCCTGCAGCTCGGACACGAC
CTGCTCGCCGACAGACACCCCAGCTCCGCCGAGATCGAGGAGAAGTGCGGGGCGCTGATG
GAGGAGCGTGCGCGGCTGGAGCGCGCGTGGGCGGCGCGGCAGGTGGCGCTGGACCAGCTC
ATAGACCTGCACTGCTTCCTGCGCGACGCCAAGCAGCTGCACGACCTCTGCGCCGCGCAG
GAGGCCTCGCTCAGTACAGAGCTGTCCCCTACCAGCAGCGTCGAGGCCATCGAGCACCAG
CTGAAGAAGCACGAAGCCTTCGAGAAGCTGATCGCGACCCAGGACGAAAAGCTGGCAACA
TTGAACAGCCATGGCGACAAGCTGCTACAGCAGAACCACGTGGAAAGCCAGAGGATCGCT
GACGAGCTGCAACTAATTAACGAGAGGAGACAAAAGCTGTACGAGGCGGCGGCGGCGCGG
CGCGCGGCGCTGGGTCGCCTGCGGGCTCGCGCGCAGCTCGCCCGGGACGCGGCCGAGACT
CGCAGCTGGGTCGCGGAGAAGCTCGCCAAGCTGACTGCCGACCAACAGCACGGCGAAGTA
ACAAACTTGGAGGATAAGATCAAGAAGCTGCAGAAGCACCAGGCCTTCACGGCCGAGCTG
GCGGCCAACAAGGCGCGCCTGCAGGAGGTGGAGGCGCTGGCCCGGCAGCTCAGCCCCGAC
CCTGAGGTCGAGGAGCAGCTGGCTGAGCTGAGGAATGACTGGGCGAAACTCGAAGACGCG
ACCCGGGAGACTGGTCGCGGTTTGGAAGAAGCCCAAGACATCCTGGAGTTCAACCAGCAC
TTGGACAAGTTCGAGGCTTGGATCAGAGACAAGGAGATGATGGTGCAGGCGCACGAGCTG
GGCCGCGACTACGAGCACTGCAGCGCGCTGCTCCGCAAGCTGGACGACGTGGACAGCGAC
ATGCGCGTGGACGACCGCCGCGTGCGCAGCGTGCGGGCGCTCGCCGACAAGCTGCTCAAC
CAGGGCCCCACCCAGCAGGCGGCCACGGTGGCGCAGCGCCGCGACGCCTTCCTGTCGAAG
TGGGCGGCCCTCAGCGGAGCCCTACAGCGGTACCGGGACAACCTGGCCGCCGCCCTCGAG
ATACATTCGTTTAACAGAGACGTGGAAGATACGGCGGAGCGTATCTCGAAGAAGGCGGCC
ATCTTCAGCAGCACGGAGCGCGGGCGCGAGCTGGAGGCCGCCCACCTCCTGCGCCGCAGC
CACCTGGCGCGCGCCGCCGAGGCCTCCGCCGTGCTCACCAGGATCCAGGAGCTTCAGGCG
GACGGCACCGACCTCGCCACCAGACACCCAGAGCACGCTAAAGATATAGAGGAGAGTCTC
CGCAACTTACGCGAGGGTTGGGACAACCTGCAGAAGTTGGCTGAGAGGAGAACCGCGCTG
CTAGATGCGGCTATCAACGAGCACAAATTCGATGAGAACTTAAAGGAATTGGAAGTCTGG
GTGTCGGAAGCCGTGAAGCAGATGGACGAAGTCGAGGACCCGGAGACGATGGCAGAAGCC
CAGGCCTTGCTGGAGCTTCACGACGAGAAGAAGGCCGAAATCGACAACCGCCAGAAAGCC
ATAGCCTCGCTGAAGAAGGAGGCCGAGCAAACGCCGGAGAAGCTTAAGAAAGTCGAACAC
CTCTCCACCACCCTCGACCAAGCCTGGCTGAAGAGGAAGGAGAATTTGACTCAGGCGCAC
CAGTTACAGCTACTGAAGGAGCAAGCGAGACAGATTGAAGACTGGCTCTCGACTAAGGAG
GCCTTCTTGAACAATGACGACTTGGGAGAGAACTTGGACGCCGTCGAGACCCTCATCCGT
AAGCACGCTGAGTTCAGCAAGCTGCTGGAGAGCCAGATCTGCCGCGTCGACGAGCTGAGG
AAGAGCGCTGAGGGCTTGAAGGACCATCCTCTGAGGGTCAGGGTGGACGACGTCCTCCGC
AGGGCCGACAGACTCAAGGAGTCGTGTAAGTCGCGCGGAGACGTGCTGCAGCAGTCCAGA
CAGCTGCACCAGTTCCTACAGGACCTGCAGCACGAGAGGGAGTGGATCGCGCTCAAGATG
CAGATCGCCAACGACCAGAATTACAGAGAACTGTCTAACCTGCAATCCAAGATACAGAGG
CACGCCGCCTTTGAATCAGAGCTTGCGGCCAACAAGGGACGCATCGACGACGTCGCCAAC
AGAGGGGAGGCGCTTATTGAATCAAAACATTACGCTTCTCAAGAGATAGCGAAACACGTC
GAGGAGTTGGAGAACCAGTGGCAGGAATTGCAGACCGCCGCTAAGCTGCGTCACGATCGC
CTGCAAGAAGCCTACCAGGCCAGGATCTTCTTCCGAGGGTTAGACGACTTCACCACCTGG
CTGGACGAGGTGGAGGCGCAGCTGCTCAGCGAGGACCACGGCAAGGACCTGGCGTCGGTG
ACGGTCCTTCTGAAGCGACACTCGCGTCTCGAGCAGCAGGTGTCGAGCAAGGCCGACACG
GCGACGCAATTGGCCGACACCGCCCGCCAGCTCGCCGACACCAAGCACTTCATGGCACAG
GAGATACTGGACAGAGCCGACCAGGCCGTCAAACGCTACCGCCAGCTACAAGAGCCGATA
CAGATCAGAAGAGATAATCTAGAAGATGCCGAGCTTCTCCACCGCTGGGATAGAGACGCC
GACGAGGAATTCGCCTGGTTACAGGAACGGGAGCCCTTGGTGCACCAGGAGGACGCCGGC
TCCTCGCTCCCGGAGGCGCAAGCTCTGCTGAAGAAGCACCTGTCTCTGGAAGCTGAGCTT
ATCGCCAGAGAGCCCACGGTCAGCGCCGTGTGCGGGCGCGCGGCGCAGCTATCCCGGCGA
GGTCACTTCGCGTCGGGCGCCCTAGAGGCCCGGGCGCGCGAGTTGTCGGCGCTCATGCGG
TCCCTGCTGCACGGCGCCAGCGTGAGGACCGCGGCACTGCAACGACGGTGCGACGTGCTT
ATGCTGGTGTCGGAGGTAGCGGAGGCGCGCGCGTGGCTGGCGAGATCGGAAGAGCGTCGT
G
(9781 bp)

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