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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoASG_c29108_g1_i1
Scaffold_idBomo_Chr24
NCBI non-redundant
(nr)		LOW_QUALITY_PROTEIN:_spectrin_beta_chain,_non-erythrocytic_2_[Bombyx_mori]
Ontology
GO:0000165 P MAPK cascade
GO:0002046 F opsin binding
GO:0003779 F actin binding
GO:0005088 F guanyl-nucleotide exchange factor activity
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0005875 C microtubule associated complex
GO:0006888 P endoplasmic reticulum to Golgi vesicle-mediated transport
GO:0007030 P Golgi organization
GO:0007041 P lysosomal transport
GO:0007411 P axon guidance
GO:0008022 F protein C-terminus binding
GO:0008091 C spectrin
GO:0016020 C membrane
GO:0019894 F kinesin binding
GO:0030036 P actin cytoskeleton organization
GO:0030507 F spectrin binding
GO:0030863 C cortical cytoskeleton
GO:0032029 F myosin tail binding
GO:0032391 C photoreceptor connecting cilium
GO:0034452 F dynactin binding
GO:0043547 P positive regulation of GTPase activity
GO:0043621 F protein self-association
GO:0045179 C apical cortex
GO:0045505 F dynein intermediate chain binding
GO:0046982 F protein heterodimerization activity
GO:0051015 F actin filament binding
GO:0051260 P protein homooligomerization
GO:0051693 P actin filament capping
GO:0070062 C extracellular exosome
GO:0097381 C photoreceptor disc membrane
Transcript
Level		FPKM:8.32 TPM:6.38
ORF EntryO_BomoASG15486_complete:A_BomoASG_c29108_g1_i1
Sequence
(Nucleotide)
GTCTACGCCGTCCACCCGGTCCACCTACTTTATGTTATGTCAAATCAAAGTTTCCGTAAC
TTGAAAAGCCGAAATTTTAAACTTTGTTTTAAAAACTTTAACACTTTCAAAAAATCTAGT
TAAAAGTGCCTCAGAAACTATCGAATAGTTATAAAATACAGTTTAAATGTAGTATTTGTT
AAGTTTGTACGTGTTTAAAACTTGAACATTGTGTAGTAGTGAGTGCCGAGTGAAATAACG
TACTAAAGTTTTACTGTTTTGTGGATTTTTGGACGAACGGGAAACAGGTCCACGCCCTTT
CTTAGGGCCGCAGTATGAGCCTGGAGGCTACGCCACGGTAGTACAGCAACGTACCAACAT
GACCCAGAGGGAGGACGCCCTCAAATTCGAGCAGGGCCGCATCAAGGCCCTGCAGGAGGA
GAGGTTGCACATCCAGAAGAAAACCTTCACGAAATGGATAAATTCGTTCCTGCAGAAGGC
CCGGATGGAGGTGGAGGATCTATTTGTGGATTTGGCAGACGGGCGGCGCCTCCTCAAACT
CCTGGAGATCATCAGCGGGGAGCGTCTGCCGCGACCCAACACCGGCAGGATGAGGGTCCA
CAAAATCGAAAATGTCAACAAAAGCTTGAGTTTCTTACACACAAAGGTGCGTTTGGAGTC
TATCGGAGCTGAAGACATCGTGGACGGGAACCCTCGACTCATCCTCGGCTTGATCTGGAC
CATCATCCTGCGTTTCCAAATCCAGGAGATCGAAATCGATGTGGACGAAGAGAATGAGTC
TTCCGAGAAGAAATCCGCCAAGGACGCCTTGCTGCTGTGGTGCCAACGCAAGACGAGTGG
CTACCACGGAGTCCACATCCACAACTTCACTGACTCGTGGAGATCTGGGCTTGGTTTCAA
CGCGCTCATACATGCTCACAGGCCCGACCTCTTCCGCTGGACCGAGGTGCCGGTCGCTGA
CCACGTGGAAACCCTCAACCACGCCTTCGACGTCGCCCACAAGCACCTCGGCATCCCCAA
ACTCCTGGACGCTGAAGATGTGGACACGACCAGGCCTGATGAGAAGTCGGTGATGACGTA
CGTGGCTAGTTACTATCACACGTTCGCTCGTATGAAGAATGAACAGAAGAGTGGTAGGAG
AATTGCCAATATCATCGGTCAAATGATGGACTGTGATGAGAGGAAGGGTGAATACAGCCG
GCTGGTCACCGCGCTCTTGGAGTGGATCCGACTCAAGATCGAAGAGTTGAATGACAGGGA
GCTGCCCAACTCTCTGGATGGAATTCAGCGTCTGCTACTTGGCTTCAAGCAGTACAGGAC
CGTCGAGAAACCTCCCAAATACAAAGAGCGATCGGAGATCGAAGCGTTATATTTCCACAT
CAACACGATGCAGAAGAGTCTGGTGGGAGAACCCTGGGCGCCACTGGAGGGACAACTTCC
TCAAGATCTGGAGCGAGCCTGGCAAAGATTGGAACAGGCCGAACACGCGAGAGAGATAGC
GCTCAGGACCGAACTGCTCAGACAACAGAGGCTCGAACAACTCAATTACAAATTCAATAC
TAAGTCGGTCCTGCGTAAGGGCTACTTGAAGGAGATGATCCAGGTCCTGTCGGACCCTCG
CTACGGCTCCAACCTGGCCCAGGTCGACGCCACTGTCAAGAAACACGAGGCCATATCTGC
GGACATCTTAGCAAGAACCGAACGCTTCGAGGACTTATCGGCAATGGCGGCAGAACTGGT
CAGGGAGAAGTACCACGGCGCGGAAGCCGTCTCCAGGACCGAGCAGGCGGTCCTGCAACG
CTGGAGGGAGCTCCTGGAATTGCTGGAGAGACATAGAGTGTCTCTGGGCAAGCTGGCCAG
ACTTATGGCACTACTGAGAGAAGCTGATGCCGTGAAACATACGCTGGTTGAGATGAAGAC
CCAGTTCCAATCGGAGGAAGTCGGCAGGCATCTGTCTGACGTGGAGAGGCTGCTGCAAGC
GCACGCTCTCCAGGAGTTGCAGCTGGGCGCCGCGGACGAGAGCCTCAAGCGGCTCGTGCG
GCTGGCGGCCGGCGTGGACGGCCCCGCGCAGCCCCAGGCTCAGCTGCAGAAGCAACTAGA
GCAACTGCAGGAGGCTTACGACAGCCTGCTGGCGGCGGCCAAGGACCGTAAGGCGAGGTT
GGAGGACGCTCGTAACCTGTACCAATTCCTGGAGGACCACGAAGAAGAAGAAGGTTGGGT
GACGGAGAAGCAGCGCATATGTCGCACCGACGTCGCCGCCAAGGACCTGAGAGGAGTGCT
GGCGCTGAAGCAGAAGCACACGGGGCTGATGCACGAGCTGAGGGCCAGGGAGCACGTCTC
CCAGCGACACAAGTCCAAGGGTCAGAGCCTCATAGACGCCGGTCACCCGAAGAGCGCCGA
GATCGAGCGGCGCCTGACCTCGCTCAGCAAGCAGTGGGAGACGCTCAGGGACCTGGCTGC
AGCACGAGAGAAACAACTGGCTGACGCTGCAGAGGCTCACCAGTTCTACGGGGACGCGAA
CGAGGCGGAGTCCTGGATGAAGGAGAAGCGTCCGCTGGTGAGCACCGCGGACTGCGGGCA
GGACGCCGCCGGCGCCGCCGCCCTGCTGGCCCGCCACCGCGCGCTGCACGACGCCATCCG
CGCGCACCACGCCGAGCTGCAGACCCTCGCCGCGCACGCAGCCCGCCTGCAGCAGGCCGG
CATACAGTGCCTCCAGTTACCAACGGAAGTGGAGTCCACTCAGGGCATGGAAGACGAGGA
GTGGGTGAACGAGTCCAGGCTGGTGCCGACCGAGGTGTGGGAGGAGGAGCCGGTCGAGAG
ACTCGAGCACAGGACCGTCACCGAGGAGAGACAAGTACCGCAGGTGAAAGCGCTGTACCC
ATTCACGGGCCAAGGGATATCGATGCAGAAGGGCGAGGTCATGTTCCTGATCAACAAGAC
GAACCCGGACTGGTGGTCGGTGCGGAAGGCGGACAGGACCGACGGCTTCGTGCCCGCCAA
CTACGTGCGGGAGATCGAGCCCAGGGTCGTGCCGGTCCAAGTCCGCAGACCAGAGAAGGT
GAGGACGGTTCAGCGCGTGAAGAAAACGGTGCTGGTGAAGCAGGTGGTGCCCGTGAAGAG
GAACAAGCCGACCGCCAGGAGGGCGTCCAGGGTCCAGCAGAAGGTCGTCACCGTGGCAGC
CAGGATGGCGGACATACAGAAGGACTACGACGAGTTGGTAGCGTTGTCGTCTGCGCGTCG
TGAACAACTCGAGGATGCCATAAAGCTGTACAGCTTCTTCGCCGAGTGCGATGACTTTGA
CAAGTGGATGAAAGACAAGGAGAAGTTCCTCAAGTCTGACGACGGCGAGGAGAGCGTGGA
CACCGCCAAGAGGAAGTATGAGAAATTCGTGACCGATCTGTCGGCGGCCTCCAAGCGCTT
GGAGCACATCGACGAGGCTGCCGAGGAGCTGGTCTCCGCCAGGCACGGGCAGGCCAGCAA
GGCGGTCGCCAGGAAGCAGCAGCTGCGCCAGCAGTGGGATAAACTACTGCGACTGAAACA
ACAGAAGGAGAAGAGCCTGGAGGGCGCGTCGAGCGTGGAGTTGTTCAGCCGCACCTGCGA
CGAGGCTCTGGAGTGGATGGCGGAGAAGGAGCAGCAGCTGGCGGCCGGGCCGGGCGCCGC
CAGCGACCTGCGCACCGTGCGCGCGCTGCAGCGGAGACACGCCCAGCTCGAGCGAGACCT
GCAGCCGCTCCGGGACAAGGTCGCCACCGTCAGTCTGCTAGCCGACTCAGTGAAGTCCCA
ATATCCGAGCGAGAGGGCTAATGTGGAAGCGAGACAGAGAGAGCTTCAGCGCGTCTGGGA
GAGGTGTCGGCAGCAGGCTGATGAGAGGAGGGACAGGCTGGAGAGCGCCGTGGGGCACCA
GATATTCGGGAACAGTAGCGCCCAGCTACAAGGCTGGCTGCAGAAAACGAGAGAGCAGCT
AGCGCAAGAGGCCACCGCCAAGGACGTCGCGACGGCCGAGGCTCTGCACGACCAACACAA
GGAGCTGCTGGACGACATCAAGACTCATGACGACGAATTCAAGGAGGTGATCGCTCTCGG
CAAACAGCTGCTGTCCAAGAACCCTGCGCTCACGGACGTGGCGGACAAGATCAAGCAGTT
GGAGCAGGACCAGAAGGCGGTCGCCAAAGAGTGGCAAGACAAGGACGCATATCTGAAGCA
GCTGGTGCAGTTGCAGTGCTTCAACCGGGAGGCCGACCAGATCGACGCGTCGTCCGGGGC
CCACGAGGCTTACTTGGACTACACGCACTTCGGGTCGTCGGTGGATGAGGCCGAGGCCCT
GGTGAAGAGGCACGAGGAGCTGGAGGCGCGGCTGGCGGCGCAGGACGAGAGGCTGTCCGC
CTTCGTGCAGCGGGCTGACGCGCTGCTGGAACTGCCACACTATGCTGCGCAGCACATCGT
GTCCCGTCGCGACGCCGTGCTATCCCGTCGTGACGCTGTGCGCCTGGCCGCCACCGAGCG
ACGCCGCGCGCTGCACGCCAGCCTGGCGTACCAGCAGTTCGTGGCGGCAGTTGAAGAATT
GCAAACTTGGATCCAGGACAAAACGAAGACTGCCAAGGACCAGAGCTACAGAGATTTGGC
CAATTTGGAGCGTAAACTTCAGAAACACGAAGCATTTGAAAGGGAGTTACAAGCCAACGA
GAAGCAACTCAGGAATGTTGAGAGTATCGGACAGTCTCTGCAGAAGTCGGATCCAGCACG
CGCCCAGGAGGTCAGCGCGCGGCTGGAGTCCCTGCGCGAGGCCTGGGAGGCGCTGGTGGC
CGCCTCCAGGGACAAGGGGGGCAAGCTCCGCCAAGCAGCTCAACAGAGGCAACACCGCAG
GTCTATTGAAGACGCGAAGGCGAGACTGGTGGAGTTGGAGAGGGCGTTGAAAAGCGAAGA
GATCGGCACCGACTTGAGGAGTTGCAAGCGACTGCTCAACCAGCACCAGACTCTGGAGCA
AGAATTAAGTCAGTGGGAGCAAAAGGCGACGGTGTTGGCTGCTCAAGGTGCCGACTTAGT
GTCGGCGGGGCACTTCGACGGGCCGGCCATAGAGAGGGACAGCGCTGCCTTACTGCGGGC
CGTGACGGCGCTCCAGCCGCCCGCCGAGGCCAGGAGGAAGGCGCTGAACCGAAGTCTCCT
GCACCACAAGTTCGCTGCCGAGGTAGCCGGCGAGTTGGACTGGCTGTCGGAGCGCAAGGC
GGCGGCGTCGTCGGAGGCGCTGCCCGCGGACCTGCACGCCACCCAGACGGCGCAGAAGAA
GCACGGGAAGCTGCGCGCCGAGCTCACCGGCCGGCGGCCCCTCATCGCGCGCGTCATCGA
GCAGGGCCGCGGGCTGGTCGCAGAGGGACACCCGCAGAAAGATAAGATCCTGGCTCTTTG
CGAAGAGTTGGAGTCAGCGTATACCGAGGTGTCGGCGGCGGCGGACGCCAGGGCCTCGCG
TCTGGAGGCCGCGCTGAGGGCGCAGCAGTTCTTGCACGAGGCCCGCGAGGTGGACTCCTG
GCTCGCTGACAAGGCGACAGCTCTCTCCACCGACGACGTTGGAGGAGACAGACATCGGGC
CACTCAACTCTTGACGAGGCATAAGGCTGTAGAGTTGGAACTGGACACGTACGCCGCGAT
CATCTCTGAGATGGGCCACGTGGCGTCGTCGATGCTGGGCTCGGGACACCCGGAGGGCGG
CACGCTGGTGTCGCGCCACGCCGCGCTGGCCGACACCCTGGCGAGGCTGCAGCGTCTGGC
GGCGCACCGGCAGCACGCGCTGGTCGAGAGCGTCTGCAGGCACGAATACTTGGCTGAGAG
CGAGGAGTTGGAGCACTGGATCCAGGAGCAGTACGCCGCAGCCTCCAGCGAGGACTACGG
CCAGGATTACGAACACTTACTGATCTTACGGTCTAAATTCGATGAGCTCCGTCACCGCGT
CGAGAGTGGAGCGGAACGGTTCAACCAGTGCGAGGAGCTGGCCAAAAAGCTGCTGGCGTC
CGAGAGCCCTTACATCGAGGACATCGAGAAGAGACAGGAGGCGCTGGGAGAGTCGTGGCA
GCGACTGGTGGAGCAGATCCAGTCGCGAGGGTCTCGTCTCCACGCGGCGGGCGAGATCCA
CCGCTTCCACCGCGACGTGGGCGAGCTGGTGTCGCGCGCGGCGGACAAGCGCGCGGCGCT
GGGCGGCCGGCCCGCGCCCCGGGACCTGCGCGCCGCCACCGCGCTGCTCCGGGACCACGA
CACGCTGCGCAACGACCTGCTCGCTGTCGACGCGCAGATGCAGGTCTTACAAGAGGAGGG
CAGTCGTCTCCAAAAGCTGTACCCTGGGGGTAACGTGACGCAGATCGCTCTACAGCAGAA
AGCTCTGGCTGAAGCTTGGGAGATGCTGAAGCAGGCTGCAGACGAACGCAAGCACGTCCT
GCTGCAGCATCTACAGCTGCACCAGTTCCTCACGCAGGTGCGCGACCTGACGTCGTGGTG
CCGCAGCGTGGCGGCGTCGCTGGGCGGCGGCGTGCGCGTGCGCGACGCGGTGTCCGCACA
GAGCGCGCGCGCCGAGCACCACGCGCTGCGCGCCGAGCTGGACGCGCGCGACGACAGCTT
CGCGGCCGCCCTGCAGCTCGGACACGACCTGCTCGCCGACAGACACCCCAGCTCCGCCGA
GATCGAGGAGAAGTGCGGGGCGCTGATGGAGGAGCGTGCGCGGCTGGAGCGCGCGTGGGC
GGCGCGGCAGGTGGCGCTGGACCAGCTCATAGACCTGCACTGCTTCCTGCGCGACGCCAA
GCAGCTGCACGACCTCTGCGCCGCGCAGGAGGCCTCGCTCAGTACAGAGCTGTCCCCTAC
CAGCAGCGTCGAGGCCATCGAGCACCAGCTGAAGAAGCACGAAGCCTTCGAGAAGCTGAT
CGCGACCCAGGACGAAAAGCTGGCAACATTGAACAGCCATGGCGACAAGCTGCTACAGCA
GAACCACGTGGAAAGCCAGAGGATCGCTGACGAGCTGCAACTAATTAACGAGAGGAGACA
AAAGCTGTACGAGGCGGCGGCGGCGCGGCGCGCGGCGCTGGGTCGCCTGCGGGCTCGCGC
GCAGCTCGCCCGGGACGCGGCCGAGACTCGCAGCTGGGTCGCGGAGAAGCTCGCCAAGCT
GACTGCCGACCAACAGCACGGCGAAGTAACAAACTTGGAGGATAAGATCAAGAAGCTGCA
GAAGCACCAGGCCTTCACGGCCGAGCTGGCGGCCAACAAGGCGCGCCTGCAGGAGGTGGA
GGCGCTGGCCCGGCAGCTCAGCCCCGACCCTGAGGTCGAGGAGCAGCTGGCTGAGCTGAG
GAATGACTGGGCGAAACTCGAAGACGCGACCCGGGAGACTGGTCGCGGTTTGGAAGAAGC
CCAAGACATCCTGGAGTTCAACCAGCACTTGGACAAGTTCGAGGCTTGGATCAGAGACAA
GGAGATGATGGTGCAGGCGCACGAGCTGGGCCGCGACTACGAGCACTGCAGCGCGCTGCT
CCGCAAGCTGGACGACGTGGACAGCGACATGCGCGTGGACGACCGCCGCGTGCGCAGCGT
GCGGGCGCTCGCCGACAAGCTGCTCAACCAGGGCCCCACCCAGCAGGCGGCCACGGTGGC
GCAGCGCCGCGACGCCTTCCTGTCGAAGTGGGCGGCCCTCAGCGGAGCCCTACAGCGGTA
CCGGGACAACCTGGCCGCCGCCCTCGAGATACATTCGTTTAACAGAGACGTGGAAGATAC
GGCGGAGCGTATCTCGAAGAAGGCGGCCATCTTCAGCAGCACGGAGCGCGGGCGCGAGCT
GGAGGCCGCCCACCTCCTGCGCCGCAGCCACCTGGCGCGCGCCGCCGAGGCCTCCGCCGT
GCTCACCAGGATCCAGGAGCTTCAGGCGGACGGCACCGACCTCGCCACCAGACACCCAGA
GCACGCTAAAGATATAGAGGAGAGTCTCCGCAACTTACGCGAGGGTTGGGACAACCTGCA
GAAGTTGGCTGAGAGGAGAACCGCGCTGCTAGATGCGGCTATCAACGAGCACAAATTCGA
TGAGAACTTAAAGGAATTGGAAGTCTGGGTGTCGGAAGCCGTGAAGCAGATGGACGAAGT
CGAGGACCCGGAGACGATGGCAGAAGCCCAGGCCTTGCTGGAGCTTCACGACGAGAAGAA
GGCCGAAATCGACAACCGCCAGAAAGCCATAGCCTCGCTGAAGAAGGAGGCCGAGCAAAC
GCCGGAGAAGCTTAAGAAAGTCGAACACCTCTCCACCACCCTCGACCAAGCCTGGCTGAA
GAGGAAGGAGAATTTGACTCAGGCGCACCAGTTACAGCTACTGAAGGAGCAAGCGAGACA
GATTGAAGACTGGCTCTCGACTAAGGAGGCCTTCTTGAACAATGACGACTTGGGAGAGAA
CTTGGACGCCGTCGAGACCCTCATCCGTAAGCACGCTGAGTTCAGCAAGCTGCTGGAGAG
CCAGATCTGCCGCGTCGACGAGCTGAGGAAGAGCGCTGAGGGCTTGAAGGACCATCCTCT
GAGGGTCAGGGTGGACGACGTCCTCCGCAGGGCCGACAGACTCAAGGAGTCGTGTAAGTC
GCGCGGAGACGTGCTGCAGCAGTCCAGACAGCTGCACCAGTTCCTACAGGACCTGCAGCA
CGAGAGGGAGTGGATCGCGCTCAAGATGCAGATCGCCAACGACCAGAATTACAGAGAACT
GTCTAACCTGCAATCCAAGATACAGAGGCACGCCGCCTTTGAATCAGAGCTTGCGGCCAA
CAAGGGACGCATCGACGACGTCGCCAACAGAGGGGAGGCGCTTATTGAATCAAAACATTA
CGCTTCTCAAGAGATAGCGAAACACGTCGAGGAGTTGGAGAACCAGTGGCAGGAATTGCA
GACCGCCGCTAAGCTGCGTCACGATCGCCTGCAAGAAGCCTACCAGGCCAGGATCTTCTT
CCGAGGGTTAGACGACTTCACCACCTGGCTGGACGAGGTGGAGGCGCAGCTGCTCAGCGA
GGACCACGGCAAGGACCTGGCGTCGGTGACGGTCCTTCTGAAGCGACACTCGCGTCTCGA
GCAGCAGGTGTCGAGCAAGGCCGACACGGCGACGCAATTGGCCGACACCGCCCGCCAGCT
CGCCGACACCAAGCACTTCATGGCACAGGAGATACTGGACAGAGCCGACCAGGCCGTCAA
ACGCTACCGCCAGCTACAAGAGCCGATACAGATCAGAAGAGATAATCTAGAAGATGCCGA
GCTTCTCCACCGCTGGGATAGAGACGCCGACGAGGAATTCGCCTGGTTACAGGAACGGGA
GCCCTTGGTGCACCAGGAGGACGCCGGCTCCTCGCTCCCGGAGGCGCAAGCTCTGCTGAA
GAAGCACCTGTCTCTGGAAGCTGAGCTTATCGCCAGAGAGCCCACGGTCAGCGCCGTGTG
CGGGCGCGCGGCGCAGCTATCCCGGCGAGGTCACTTCGCGTCGGGCGCCCTAGAGGCCCG
GGCGCGCGAGTTGTCGGCGCTCATGCGGTCCCTGCTGCACGGCGCCAGCGTGAGGACCGC
GGCACTGCAACGACGGTGCGACGTGCTTATGCTGGTGTCGGAGGTAGCGGAGGCGCGCGC
GTGGCTGGCGAGATCGGAAGAGCGTCGTG
(9629 bp)

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