SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoASG_c29105_g1_i4
Scaffold_idBomo_Chr18
NCBI non-redundant
(nr)		nuclear_RNA_export_factor_1_[Bombyx_mori]
Ontology
GO:0000166 F nucleotide binding
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0005635 C nuclear envelope
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0006378 P mRNA polyadenylation
GO:0006406 P mRNA export from nucleus
GO:0006810 P transport
GO:0007616 P long-term memory
GO:0016973 P poly(A)+ mRNA export from nucleus
GO:0030534 P adult behavior
GO:0031965 C nuclear membrane
GO:0044822 F RNA binding
GO:0047485 F protein N-terminus binding
GO:0051028 P mRNA transport
GO:0051168 P nuclear export
Transcript
Level		FPKM:6.44 TPM:4.94
ORF EntryO_BomoASG15472_complete:A_BomoASG_c29105_g1_i4
Sequence
(Nucleotide)
TTTAACTCTTTTGTAATTTGCGTTGTTAATTAAAAAAAGCTATTATTCAATTATCATTGG
CTTTATCTCAGTTAACTATTCTACACGCATGTGAGAAAATAAGGAAACCTTAAAGAACTA
CTTTCACGGTATTTGTATACTGGTGATTAAAGCTTCTTCGACACGATGCCAAAACGTGGC
GGTGGAAGGAATAGAAATTGGAAGGCTGATACTGACCATTTTGAACACGATGACCGTGTC
AATAGTGTGCCGAGACATGTCAGTTTTAAACCTGGAGCTAAAGGAAAAAATAAATTTCGA
ACTTGGAAAAATCCTTTAGCCCTCCTTGATGATGATATTGACATGGGTAGTTCTGCTCTT
CAAGGACCGGTCCGGAAAAGTTCTTTCAGGGGACGTGGGAGAATGTACTCTCCAGCTCCG
CAAGGAAGCCACGGACACACTAAAAAGAAATTTATTCCTGGTGTACTGCCTTGGTACCAA
ATAATCATTCCATATGGAGCAAAACATGAAAAAGATGTTATCCTCCGAGCCTTGTTGGGT
TTTCTTTCACCCGACATATTCATTCCACATTACTATAAAGTCAATGGAAATGCTGCAGTA
TTCTATGTTGATGATGTCAAAACAGCTGAAAAACTTTATAATGCTGATAGAAAGATCACT
ATGTCAGATGGTTTTAAGTTAATTGTTATTGTGAGGAATGCTGTTCCAAACATGGCCATT
GACGCTGCCATGAAAGAGAAGATGAAATTGACAATGGCGAAGAGGTATAATGCTACAACT
AAGGCATTAGATTTAACAAAATTCCATGCTGATCCAGATCTAGAAGATATATTTTGTGCA
CTGTTCCGTCCAATGATAATGTTGGCTGCTATAGATATAATAGCAGAGAATATTCCAGAC
ATAGAAGCTTTGAACCTAAATGATAATAAGCTTCATGGTTTGCAGCATCTCAAGGTTTTG
TCTTCAAAGCTCAAGAATTTGAAAATATTGTATATGGGCGATAATAGGATTCCATTCCTT
GGATCACTGGACCCAATCAGATCATTACCGCTAGTTGAGCTATACCTCAAAGGAAACCCA
CTGGTGAACAGGTTTCATGATCACGAAATCTACATAAGTGATGTCCGGAAGAAGTTTCCC
AAGCTGACAAGATTGGATGGCGCGGATCTTCCACCGGCTATTGGATTCGACGTAGCTGAA
GATATGGGACTTCCCCCTCGGCAACAATCGTTCCTGGTAGACCCGGCGGGTCAGGATCTT
GTCAGGGAGTTTCTCACTCAATACTATGCGATATACGACTCGGAATCTCGGCAACCACTT
CTAGAGGCGTACCATGAAAATGCTACAATGTCGATGGCTGCAAATTATTTAACTAATGAC
AGCAGGAATTCTACGACAACTAGGTTAAACTCTTACATATCGAACAGCCGTAATTTAACC
CGAATAACAGAAAGGGAGTCGAGAAGGCGTTACCTACGTACCGGAAAGCTGCAAGTAGTC
TCCTTTCTATCAGATCTGCCAAAAACAACACACGATTTAATGGGTTTTGCTGTCGACTTA
CTAGTCTTTACTCCGGCCATGATCGTCCTTACAATGAACGGTGTGTTCAAAGAAACGAAC
ACTCCCAATAACCCGATGCGTTCGTTTCATCGGACGTTCGTGATAGTTTCAAATGCGAAT
GGCGGCTTCTCAATCATCAACGATATGTTATATATCACGAATACTACTAAAGAACAGGAG
GATAAGGCCTTTTCAACGGGTACTGTAGAACCGATTCCACCTACTCCAGCGCCCACGCCT
ACTCCTACTCCCACGCTCGCAGCTGGGACGCCAGATGATTCTCAGAAGATGCAGCTACTC
AACATGCTTGGTCAACAAACTGGAATGAATGAGCATTGGAGTATCAATTGTCTTCAAGAA
ACTGGCTGGGATTTGCAAAGGGCTATGTTCATCTTTAATCAACTACACTCCGAAGGCAAG
ATACCGCCTGAAGCCTTTGTAAAGTGAATGAATATGAAAAACATTTGGAGCTTAAATTAG
AACTTTGTAAATAGTGAAAAGAGTGAAATAGTGAGATATTTTATAGAATTATCAGAAGAT
TATATGGAATTGAAAATGTTTTTGTTGGTGTTGGAATAAAAAATCTACACAACAAAGTGA
ATGGTCATAAAATGAGGAATGTATGTCTGAGTCGGCAATGGATATGCAGTTTATGTGAAG
AGAATTACTTTAAGGAAGTACATGTTTGTGTACAAACTTTTTAGAAGAATAAGAAAATAA
TGGTTTACAGAAGAAAGTCAAGAATGCTTTTAAAAGATGGAAACAATACAAAACCGAAGA
GTTATCTATTACCAAAATAAGTTTTAAATAAGTTTTTTTCTGTAATAGTTGAAATTTATG
CTGAAACAAATTACTGTAGAAATTATAGTACCAAATTATTTATCATCTGCAAAATGTTTG
CCCCTCCATGGCATCCAATCTAAAATTTATGTTTTATGG
(2499 bp)

- SilkBase 1999-2023 -