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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoASG_c29098_g1_i1
Scaffold_idBomo_Chr18
NCBI non-redundant
(nr)		LOW_QUALITY_PROTEIN:_symplekin_[Bombyx_mori]
Ontology
GO:0003677 F DNA binding
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005848 C mRNA cleavage stimulating factor complex
GO:0006378 P mRNA polyadenylation
GO:0006379 P mRNA cleavage
GO:0006397 P mRNA processing
GO:0006398 P mRNA 3'-end processing by stem-loop binding and cleavage
GO:0035363 C histone locus body
Transcript
Level		FPKM:15.48 TPM:11.87
ORF EntryO_BomoASG15461_complete:A_BomoASG_c29098_g1_i1
Sequence
(Nucleotide)
GAATCGGTGCAAATTTTGATAATCACCGTATTTCTTGATGCCCTTTTCTTACGTTGAAAA
TTTTGCAAAATATTGTAAATAAAATAATAAATGGAATTGTTTATTATATGAACAATACAG
AATGTCGAATAAACACGGACACACGTCTAATACTACAGTACAAAATCAGCTAATACGATG
GATAAACGATACTGGAATGGCGGAAGGAAACAAAAAAGCAGGCTTATTGAGAAAAGTCAT
AGAAGTTCTGCTACATCAAGGCTCGCAAATGATTCCAGTATACATGGAGAATATACTAAG
CTACATCAGCGATAAAAATACAGACGTAAAGAAGCAGGTCGCGTATTTTGTTGAAGAGTT
GAGTAAAAGTCACCCTGAACTTCTTCCCAAGATTGTCGCTCAGTTGCGTCTCCTACTCCT
TGACCCAGTCATTGCGGTGCAGAAGAGGGCCATCCAAGCAGCCAGTATACTGTACCGTAA
TACGTTAATGTGGATCTGTAAAGGTGACGCTGAAGTATCGGAAATGAAACATGTATGGGA
ACATTTAACTGAATTAAAGTTGATGGTTTTAAACATGATCGACAGTGAGAATGAAGGTAT
CAGAACGCATTCCATTAAGTTCCTGGAAGAGGTTGTGCTCCGGCAAAGTCCCGGTGACAT
TGTTGATGCTGAATCCAGCTTGGATAGTCTACCATCAGATGTTCCTTTTATCAATAGAAA
AGCTCTCGAAGAGGAATCTGACCATATCTTCAAACTACTGGTCAAATTTCATAATTCACA
GCACATATCAAGTGTAAACCTGATGGCTTGTATGACAACGCTATGTTCTTTAGCAAAATT
CCGTCCTAAATACTTGCCCCGAGTCATACAAGCACTAGGCGATCTTCACACGACACTACC
TCCAACTCTATCGCAGTCTCAAGTCAATTCAGTCAGGAAACATCTCAAAATGCAGATATT
GAATTTAATAAAACAATCAACTTCTAATGAGATGATGCCGCAGTTGACACAATTGCTAAT
TGATATCGGAATGACAGCACAAGAGATTAATAAGGCGGTACCGAAAGAGAAAAGAAACAA
ACGCTTAGGGGAAATTAGGAATGGGGATACACCATCTAAACGGTTCAGAATCGATTCACC
TCAAAGTAATAGTCAAGGTAGCGACAGTAACAGCCGTAGTGAATTCATGTATGACGATGA
CAGCCAGTCAAGCATCACGAAGCCTTCGGCAACAGAAGACAGTATCCTCGAAGGCTTAAA
TTCTGTGGACAATGTTGTTAATCTTGTCATGAAAACATTGCAGAATTGTCTACCAGATAA
CATGCCGCCCTCGTTCACAAATGATTACAAGCCAATACCTAACTCTGGTAGCAAAGTACA
AAAGAAGAACTTGGCTAAAATGTTGATGAGCTTAATAAGAGGTGAATCAGAAAATACACA
AATAGTTACACAATCAATGGAGGTAGATACACAACCTAACCAGACAGTATTACAACAGAG
CTTATCCGATATAGCTGCGAAAATACCGTTAATAAGGGAAGATGATGAGAAAACTACCCT
CAAAAATGCTGTAGCTAAATTACAAGAGTCAACAAAAGACAGGCAGATAGAGAGTGCGGT
TTCTAAACTAATGGAAGAAACGAGACAGGAACATTTGAAGGAGGAAGAGAGGAAAGCAAA
GGAGAAAGAGAAACCGGTTCCTCCACCTACTCCGACGGTGCCTAAACTGAAACAGAAAGT
GAAGCTATTGAAACTACAGGAAATAACACGGCCCATCCCAAAAGAAATAAAGCAAAAGTT
GATACTGCAGGCCGTTGAGAGGATTTTAAATGCGGAAAAAGACGCCGCTATCGGTGGAGC
CGAACAGATCCGGGCCAAATTCATCACGATATTCGCTTCGAGTTACACGCCGGAAACGCG
CGATCTAGTACTGAATTACATTTTAGACAATCCCGCCGAGCGCATCAACCTCGCTTTGAA
GTGGTTATATGAAGAATACGCATTCATGCAGGGCTTTAACCGACATCCGGTGACCCTACA
ACCGAAACTGCACGAGAAGCACGATCAAAACTACAACCAGTTGCTCTGTGCTCTGGTCAC
CCAGATATCCGAGAGAGGCGACCCTGTCATGGAAGGATGCAAAGATGTTTTACTAAGGAA
GATATATTTGGAGAGTCCGGTGATCACGGACGAGGCCCTGGATTATTTGAAGCACTTGGT
CACTGAAGATCAGGTGGCTCTGCTGGCTTTGGAGTTGCTAGAGGAATTGTGTTTGATGAG
ACCACCTCGGGCACACAAATATGTGACATCGTTGGTCTGTCATGTTTTGAGCGAAAATGA
GGAAATCCGCGATATAGCTTTGAAAGCTACCATCAAAGTTTACAAACGTGGCTCAGAAGC
TGTTAAGAAAGTCATCGAGAAACACGCTCTCCTGTACTTAGGGTTCATATCGTTGAATCA
TCCGCCCCCTGAACTTTCAAGCACCAGAACTAGGATCATGTGGAATGAGAATTTACATAA
GCTGTGCTTGAATTTAGTTGTGGCGCTCTTCCCAGAAAAAGAAGGACTACTGATGGAAAT
AGCAAGGATATACGGCAGCTCCGGTGCAGAGGCGAAGCGCGTTGTACTGCGAACCATCGA
GGGTCCGATCCGGGCGATGGTGTCCAAGGACCTGCCCGACAACGAGTTCGACGAGGACGA
CGCCACGCTGCGCCCCGCCTTCAGGGAACTGCTCGAGAACTGTCCCCGAGGAGCAGAGAC
TCTGCTCACCAGACTAGTGCATATACTGACCGAGAAAGTGCCTCCAACAGCCGAACTAGT
GTCGAAAGTACGAGACATATACGCCACCAGAGTGTCCGACGTTAGATTCTTGATCCCCGT
GCTCACCGGACTGTCAAAGAGAGAGATCGTGGCAGCCCTACCGAAACTAATCAAGCTCAA
CCCTGCCGTCGTGAAGGAGGTGTTCAACAAGCTGTTGGGAATCAACGGCACGTACGACGA
GCAGTCGCCCGTGTCACCAGCGGAACTGCTGCTAGAGCTGCACCTCATCGACCCTGAGAA
GGCGGACCTGAAGTACATCATAAAGGCGACGGCTCTGTGCTTCGCCGAGAAAAACATTTA
CACGCAAGACGTCCTGGCAGCAGTATTGCAGAGGCTGGTCGAGGAGCCGAAGATCCCTGT
TCTGATGATGCGGACCGTGCTGCAGAGCCTCACCCTGTACCCCGCCCTCAGTCCGCTCGT
CATGAACATCCTGCAGCTGCTAATTGAAAAGGAGGCGTGGCTGAACAAGGTGGCGTGGGA
GGGCTGGATCAAGAGCTGCGAGCGGCTGATGCCGGCATCGTTCGGTCTGCTGACGTCCCT
GCCGGCGGCGGCGCTGGGCGGGCTGCACAAGGCGCCGGAGATC
(3403 bp)

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