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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoASG_c29008_g1_i3
Scaffold_idBomo_Chr10
NCBI non-redundant
(nr)		LOW_QUALITY_PROTEIN:_ATP-dependent_RNA_helicase_DHX8_[Bombyx_mori]
Ontology
GO:0000166 F nucleotide binding
GO:0000398 P mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0004004 F RNA helicase activity
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005681 C spliceosomal complex
GO:0005737 C cytoplasm
GO:0006397 P mRNA processing
GO:0008026 F helicase activity
GO:0008380 P RNA splicing
GO:0016787 F hydrolase activity
GO:0042802 F identical protein binding
GO:0044822 F RNA binding
GO:0071013 C catalytic step 2 spliceosome
Transcript
Level		FPKM:15.63 TPM:11.99
ORF EntryO_BomoASG15292_complete:A_BomoASG_c29008_g1_i3
Sequence
(Nucleotide)
GTCAAAATAGCCTAAAAATGTGAGTTTTGTGTGACTTTGTTCATACGTTAGAATTTGTTA
GATTTGATGGTTTTAAAGTGAAGCTAATACTTAAAATGGACGAAGTCACTAAATTAGAGC
ATCTTTCGCTCGTGTCTAAAATATGCACCGAGCTAGACAACCATTTAGGTTTGAACGACA
AGGATTTAGCGGAATTCATCATAGATTTGGCTGATAAGAATCCAACATTTGAAACTTTTA
AAGTAGCATTGGTTGAAAATGGGGCTGAATTTTCTGATTCCTTCATGACAAATCTACTCC
GTATAATACAGCACATGAAACCTGTGAATACATCAACATTGATTAAAAATATTGCCGAAA
CTGAAAGTGAAAATCCTTTGGCAAAAAAGTTTCCTGGCTTGGCCATACCAAATGATAAAC
CTCAATCTTTTTCTGATGAAAGTAGTGATGATGAAAAAGACAAAAAGAGAATAACAGCCA
AAGACTTATTTACAGAAGAAATTAAACCAAGTTCTACTGATAATGTTGTTGATTTGGCGA
TGGCTGAATTGGAAGCTTTAGCACCTTCCAATTCTACAACAAATGAACTTCTTATAGGAA
AAGAACCCCTAAAAATTGAGAGTAGTAGAAATAGTGATCACAAAGAAAAGAATAAATCAG
AAGAATCTAGAGATAAAGAGAGTAGGAGTCGAAATCCTAAAAGAAGCAGAAGTAGGGAAC
GTAAAAGAAGCAGAAGTACACAGAACACAGATAAATATAAACTAGAAGAATCTCGAGATA
GAAAAAGGCATAGTAGAAGTCGAGATCGTAAAAGAAGTAGGAGCCGAGATAGAAAAAGAA
GTAGGAGCCGAGATCGTAGAAGAAGTAGGAGTAGAGATTATAAAAGAAGTAGAAGTAGGG
AACGTAAAAGAAGTAGAAGTAAAGGTAAGAGAAGTCGTAGCCGGGATAGGAGAAGCAAAA
GTCAAGACAGAGACCGTAGAAGAAGATCACACAGTCGACATCGTCACAGATCCAGGTCTA
GGGACAGGCGTAGATCTTACTCGAAAAGTAGAAGATCAGTATCAGGTGGCAGAAGATCTC
GTTCAAGAAATAGAGAAGAAAAATTTGATTATGGCAAGAAAAGCAGAAAACGCAGCCCTG
AAGTAGAATTGAACGATGATCCTGAACCAGGAAAAATATACAGTGGCCGCGTTGCAAACA
TTGTACCATTCGGCTGTTTTGTTCAAATTGAAGGAGTCAGAAAAAGGTGGGAAGGATTGG
TGCATATCTCACAGCTGCGAGCTGAGGGTCGTGTCACCAATGTATCTGATGTTGTCAATA
GAGGTGATAAAGTTAAGGTCAAAGTAATCTCAATAACAGGACAGAAAGTTTCTCTCACAA
TGAAGGATGTTTGTCAAGAGACCGGGAAGGATCTCAATCCAGCATCCCATGCTCACCTGG
AAGCAGAACGTGAAGGCCGAAACCCTGATCGCCCTCCACCAGCAGCAACTGTGTTAGCCG
GACTCCAAGGTGGAATAGACCCTGATGAGGATTCTAGTAGGAAGAGGGTGACAAGGATAT
CCAGTCCTGAGAGATGGGAGATCAAACAGATGATTTCATCAGGCGTAATTGATAAGAGTG
AATTACCAGATTTTGATGAGGAGACTGGTTTACTTCCAAAAGATGAAGATGGCGAGGCAG
ACATTGAAATAGAGCTAGTAGAAGAAGAACCTCCTTTCCTCCAAGGTCATGGCAGAGCCC
TTCACGATCTTTCTCCAGTAAGGATAGTTAAGAATCCCGATGGCTCCCTTGCACAAGCAG
CCATGATGCAGTCCGCATTGGCCAAAGAGAGGAGAGAGCAGAAGATGATCCAACGGGAGC
AGGAAATGGACAGCGTACCTACTGGTCTAAATAAAAATTGGATAGATCCGCTACCTGAGT
CCGAGGGTCGAACGTTAGCGGCCAACATGCGAGGCGCGGGCGTGGTCCCTCAAGACTTGC
CAGAATGGAAGAAACACGTCATCGGTGGAAAAAAATCCTCATTTGGAAAGAAAACGAATT
TATCCCTGCTCGAGCAGAGACAGTCGCTGCCCATATACAAGCTTAGAGATGAACTAACTA
AGGCCGTGTCCGACAACCAGATCCTGATCGTGATCGGCGAGACGGGGTCGGGCAAGACGA
CGCAGATAACGCAGTACGTGTGCGAGTGCGGGCTGGCGGCGCGCGGCAAGGTGGCGTGCA
CGCAGCCGCGCCGCGTGGCCGCCATGTCCGTCGCCAAGCGCGTTGCCGAGGAGTTCGGCT
GCCGGCTGGGCCAGGAGGTGGGCTACACCATACGCTTCGAGGACTGCACCAGCCCGGACA
CTGTCATCAAATACATGACGGACGGCATGCTGCTCCGCGAGTGCCTCATGGACCTGGACC
TGAAGGCGTACTCGGTGATCATGCTGGACGAGGCGCACGAGCGCACCATCCACACCGACG
TGCTGTTCGGTCTGCTGAAGCAGGCCGTGCAGAAGCGCCCCGAACTCAAGCTCATCGTCA
CGTCCGCCACGCTCGACGCCGTCAAGTTCTCGCAGTACTTCTTCGAGGCCCCGATCTTCA
CCATCCCCGGTCGAACCTTCCCCGTCGAAGTCTTGTACACCAAGGAACCGGAGACGGACT
ATTTGGACGCCTCACTGATCACGGTCATGCAGATCCACCTGAGGGAGCCCCCGGGGGATA
TCCTGCTGTTCCTCACTGGCCAAGAAGAGATTGACACGGCGTGTGAGATATTGTACGAGA
GAATGAAGTCCTTGGGGCCGGACGTGCCGGAGCTGATAATTCTGCCGGTGTACTCTGCGC
TGCCGTCCGAGATGCAGACCCGGATCTTCGAGCCGGCGCCCCCCGGCTCCAGGAAGGTGG
TGATCGCCACCAACATCGCGGAGACGTCGCTGACCATCGACGGTATATACTACGTGGTGG
ACCCTGGCTTCGTTAAACAGAAAGTCTACAACTCGAAGACTGGAATGGATTCGTTGGTTG
TAACTCCTATATCGCAGGCGGCGGCGAAGCAGCGCGCCGGGCGGGCGGGCCGCACCGGGC
CGGGCAAGTGCTACCGGCTGTACACGGAGCGAGCCTACCGGGACGAGATGCTGCCCACGC
CCGTGCCCGAGATACAGCGGACCAACCTCGCCACCACCGTATTACAATTGAAAACAATGG
GTATAAACGATTTGCTGCATTTCGACTTCATGGACGCGCCGCCGGTCGAGTCGCTCATCA
TGGCGCTGGAGCAGCTGCACTCGCTGTCGGCGCTCGACTCTGAGGGACTCCTGACGAGGC
TGGGACGCAGAATGGCCGAATTTCCACTAGAGCCAAACCTATCGAAGATCCTAATCATGT
CGGTGGCCCTGCAGTGCTCGGATGAAATACTCACAATAGTGTCGATGCTGAGCGTCCAAA
ACGTTTTCTATCGGCCGAAGGACAAGCAGGCGCTTGCCGACCAGAAGAAGGCCAAGTTCA
ACCAGCCGGAAGGGGACCACCTGACGCTACTGGCCGTGTACAACAGCTGGAGGAATAACA
AGTTCTCGAACGCGTGGTGCTACGAAAACTTCGTGCAGATCAGGACGTTGAAGCGGGCCC
AGGACGTGAGGAAGCAGCTCCTCGGGATCATGGACAGACACAAATTAGACGTAGTTTCAG
CCGGTAAGAATACAGTTCGCATTCAGAAGACGATATGCTCGGGCTTCTTCAGGAACGCGG
CCAAGAAGGATCCCCAGGAAGGATATAGGACGCTCGTGGACAGTCAAGTTGTTTATATAC
ATCCTTCCAGTGCACTGTTCAACAGACAACCGGAATGGGTAATCTACCATGAGCTAGTAC
AGACTACGAAAGAGTACATGAGGGAAGTCACGACCATAGACCCGAAATGGCTGGTTGAGT
TTGCTCCCGCCTTCTTTAAATTCTCGGACCCAACAAAACTCTCTAAATTTAAGAAGAACC
AGAGACTGGAACCGTTGTACAATAAATATGAGGAGCCGAACGCTTGGAGGATATCGAGAG
TCAGACGCAGAAGAAATTAGTGGTG
(4045 bp)

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