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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoASG_c29008_g1_i1
Scaffold_idBomo_Chr10
NCBI non-redundant
(nr)		LOW_QUALITY_PROTEIN:_ATP-dependent_RNA_helicase_DHX8_[Bombyx_mori]
Ontology
GO:0000166 F nucleotide binding
GO:0000398 P mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0004004 F RNA helicase activity
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005681 C spliceosomal complex
GO:0005737 C cytoplasm
GO:0006397 P mRNA processing
GO:0008026 F helicase activity
GO:0008380 P RNA splicing
GO:0016787 F hydrolase activity
GO:0042802 F identical protein binding
GO:0044822 F RNA binding
GO:0071013 C catalytic step 2 spliceosome
Transcript
Level		FPKM:1.36 TPM:1.04
ORF EntryO_BomoASG15289_5prime_partial:A_BomoASG_c29008_g1_i1
Sequence
(Nucleotide)
CTCTTCCGATCTCCGTGTCCGACAACCAGATCCTGATCGTGATCGGCGAGACGGGGTCGG
GCAAGACGACGCAGATAACGCAGTACGTGTGCGAGTGCGGGCTGGCGGCGCGCGGCAAGG
TGGCGTGCACGCAGCCGCGCCGCGTGGCCGCCATGTCCGTCGCCAAGCGCGTTGCCGAGG
AGTTCGGCTGCCGGCTGGGCCAGGAGGTGGGCTACACCATACGCTTCGAGGACTGCACCA
GCCCGGACACTGTCATCAAATACATGACGGACGGCATGCTGCTCCGCGAGTGCCTCATGG
ACCTGGACCTGAAGGCGTACTCGGTGATCATGCTGGACGAGGCGCACGAGCGCACCATCC
ACACCGACGTGCTGTTCGGTCTGCTGAAGCAGGCCGTGCAGAAGCGCCCCGAACTCAAGC
TCATCGTCACGTCCGCCACGCTCGACGCCGTCAAGTTCTCGCAGTACTTCTTCGAGGCCC
CGATCTTCACCATCCCCGGTCGAACCTTCCCCGTCGAAGTCTTGTACACCAAGGAACCGG
AGACGGACTATTTGGACGCCTCACTGATCACGGTCATGCAGATCCACCTGAGGGAGCCCC
CGGGGGATATCCTGCTGTTCCTCACTGGCCAAGAAGAGATTGACACGGCGTGTGAGATAT
TGTACGAGAGAATGAAGTCCTTGGGGCCGGACGTGCCGGAGCTGATAATTCTGCCGGTGT
ACTCTGCGCTGCCGTCCGAGATGCAGACCCGGATCTTCGAGCCGGCGCCCCCCGGCTCCA
GGAAGGTGGTGATCGCCACCAACATCGCGGAGACGTCGCTGACCATCGACGGTATATACT
ACGTGGTGGACCCTGGCTTCGTTAAACAGAAAGTCTACAACTCGAAGACTGGAATGGATT
CGTTGGTTGTAACTCCTATATCGCAGGCGGCGGCGAAGCAGCGCGCCGGGCGGGCGGGCC
GCACCGGGCCGGGCAAGTGCTACCGGCTGTACACGGAGCGAGCCTACCGGGACGAGATGC
TGCCCACGCCCGTGCCCGAGATACAGCGGACCAACCTCGCCACCACCGTATTACAATTGA
AAACAATGGGTATAAACGATTTGCTGCATTTCGACTTCATGGACGCGCCGCCGGTCGAGT
CGCTCATCATGGCGCTGGAGCAGCTGCACTCGCTGTCGGCGCTCGACTCTGAGGGACTCC
TGACGAGGCTGGGACGCAGAATGGCCGAATTTCCACTAGAGCCAAACCTATCGAAGATCC
TAATCATGTCGGTGGCCCTGCAGTGCTCGGATGAAATACTCACAATAGTGTCGATGCTGA
GCGTCCAAAACGTTTTCTATCGGCCGAAGGACAAGCAGGCGCTTGCCGACCAGAAGAAGG
CCAAGTTCAACCAGCCGGAAGGGGACCACCTGACGCTACTGGCCGTGTACAACAGCTGGA
GGAATAACAAGTTCTCGAACGCGTGGTGCTACGAAAACTTCGTGCAGATCAGGACGTTGA
AGCGGGCCCAGGACGTGAGGAAGCAGCTCCTCGGGATCATGGACAGACACAAATTAGACG
TAGTTTCAGCCGGTAAGAATACAGTTCGCATTCAGAAGACGATATGCTCGGGCTTCTTCA
GGAACGCGGCCAAGAAGGATCCCCAGGAAGGATATAGGACGCTCGTGGACAGTCAAGTTG
TTTATATACATCCTTCCAGTGCACTGTTCAACAGACAACCGGAATGGGTAATCTACCATG
AGCTAGTACAGACTACGAAAGAGTACATGAGGGAAGTCACGACCATAGACCCGAAATGGC
TGGTTGAGTTTGCTCCCGCCTTCTTTAAATTCTCGGACCCAACAAAACTCTCTAAATTTA
AGAAGAACCAGAGACTGGAACCGTTGTACAATAAATATGAGGAGCCGAACGCTTGGAGGA
TATCGAGAGTCAGACGCAGAAGAAATTAGTGGTG
(1954 bp)

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