SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoASG_c28989_g2_i1
Scaffold_idBomo_Chr18
NCBI non-redundant
(nr)		synaptobrevin_homolog_YKT6_[Bombyx_mori]
Ontology
GO:0000139 C Golgi membrane
GO:0000149 F SNARE binding
GO:0005484 F SNAP receptor activity
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0005829 C cytosol
GO:0006810 P transport
GO:0006887 P exocytosis
GO:0006906 P vesicle fusion
GO:0008152 P metabolic process
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016192 P vesicle-mediated transport
GO:0016740 F transferase activity
GO:0030659 C cytoplasmic vesicle membrane
GO:0031201 C SNARE complex
GO:0031410 C cytoplasmic vesicle
Transcript
Level		FPKM:21.07 TPM:16.16
ORF EntryO_BomoASG15244_3prime_partial:A_BomoASG_c28989_g2_i1
Sequence
(Nucleotide)
GAGATATTCTCATGACGTAGGCATTAAGACATTTATGACAAATAACCAAGGCCAAATAGT
AAAAAATCACTTTTTACGATTTCACGAAGAAAAATTATCTTACAAATGTATTAAAATAAT
TTTAAGACTTTTGTCTGATTTCGGGTAATCTAATATTGTAGCACGTCCAAGATTGTACAA
ACGTAAAATTCATTCAGAAGGCTCATTTACGACGAATTAAACGACGAGCTATTGAATCTT
GGAGACCGAGCGATAAAAATTATCTAACAAAAATGGTGAAAGTTTATGCACTACTTGTAT
TGTACAAAGGGATTAATAATGCATCCATTCTGAAAGGTGCTTATGATCTTCGGAGTTTTA
GTTATTTTCAAAGAAGTTCAGTGCAAGAATTTATGACTTTTGTTAGTAAAACTATGGTAG
AGAGGACACATCCAGCATCAAGGCAATCAGTTAAGGAAGGAGAGTATATGTTGCAAGTGT
ATGTGCGTGCAGATAATTTAGCTGGAGTATTGATATCCGATCACGAGTATCCTAACAGAG
TAGCACACACTTTGATCACTAAAACTCTTGATGAGTTTACAGCTGCAGTTCCATCAAGCA
CTTGGGCTACGGGTAAAGAATCAACAATTGATTTTCCATCATTGGCTTTACATTTAGAAA
AATACCAAAATCCCAAAGAAGCTGATGCATTGACGAAAATTCAAAATGATCTGGATGAAA
CGAAAATTATTTTACATGATACAATAAAAGCTGTACTTGAGAGAGGTGAGAAGTTAGATG
ATTTGGTTGCTAAGTCAGACAGCCTGTCGATGCACAGTAAAGCATTTTATAAAGCATTTT
ATA
(843 bp)

- SilkBase 1999-2023 -