SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoASG_c28984_g1_i2
Scaffold_idBomo_Chr6
NCBI non-redundant
(nr)		ATP-dependent_RNA_helicase_DDX18_isoform_X2_[Bombyx_mori]
Ontology
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0004004 F RNA helicase activity
GO:0004386 F helicase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0010501 P RNA secondary structure unwinding
GO:0016020 C membrane
GO:0016787 F hydrolase activity
GO:0044822 F RNA binding
Transcript
Level		FPKM:2.84 TPM:2.18
ORF EntryO_BomoASG15234_complete:A_BomoASG_c28984_g1_i2
Sequence
(Nucleotide)
AACACATTTAATTGCAAAAATCTGAAATGTCTTATAATTGATGAAGCTGATAAACTGTTA
GAATCTGGCTTTGAAAAGCATGTAAATGGAATACTGGAAAAACTTCCAATGCAACGATTG
ATGATAGAGTTAAGAATCTAGCTAGACTGGCGTTGAGGAGCGATCCGATCTGGATAACTG
TTGATGATGACGCAAAGCGGTCCACTGTCTCTGGATTGCAACAGGGGTACTACATTTGCC
CAGTAGAAAAAAGAATGGCTTGGTTGTACAAGATGTTGAAGAAGTGCAAGAAACTGAAAG
TCATGGTGTTTTTCTCATCGTGTAAATCGGTCGATTTTCATTATGAATTCTTTAGAGTGA
ATTGTAAGGCAATCGTCTCTAGTATACACGGCAGACAAAGCCAGGCCAAAAGAAAAGAAG
CCTATCACGGTTTCGTGGAAGCACAAAACGGTGCGTTGTTCTGTACCGATGTCGCCGCGA
GAGGACTGGACATACCGAGCGTCGATTGGATTGTCCAATACGACCCTCCCACTGACCCTA
AGGAGTACATACATAGAGTTGGACGTACCGCCCGAGGTATGAACAGCAAAGGCAATGCAG
TGATATTACTTAGACCAGAGGAAGAGGAATTCGTGAAGTTCTTAGAGAACGAAAAAGTTT
ATTTAGATAAATACACTTTTGGCGATCCCCCGGCAGACATACAAGAATTTCTTCAAAAAC
TAATAAAAGAGAACGGAGTTATGAAAGTTTTGGCGAGAAAAGCTTTTCTTTCGTTTTTAC
GTTGTTATAAAAATCATCCACTGAAGAGTATTTTTAATATCAAAAATCTGAATCTACAGT
TGGCATCAAAAGCCTTTGGATTTGATGAAACGCCTCATGTCGATTTCTTACGTTCTAAAT
GAAGGTATCGGAG
(913 bp)

- SilkBase 1999-2023 -