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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoASG_c28954_g1_i3
Scaffold_idBomo_Chr22
NCBI non-redundant
(nr)		serine/arginine_repetitive_matrix_protein_1_isoform_X3_[Bombyx_mori]
Ontology
GO:0000375 P RNA splicing, via transesterification reactions
GO:0000398 P mRNA splicing, via spliceosome
GO:0003677 F DNA binding
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005681 C spliceosomal complex
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0016363 C nuclear matrix
GO:0016607 C nuclear speck
Transcript
Level		FPKM:8.07 TPM:6.19
ORF EntryO_BomoASG15155_complete:A_BomoASG_c28954_g1_i3
Sequence
(Nucleotide)
GAGGCCCTTAGCATATCTGCGATGCAAGTTTTGAAGAGGGCGAGTGTGCGGTGAGTGTTG
GCGCGGGGCGTCATATGCAGAGCATCACATCGGTCTACAACTTCGCTGCGCCCTCATCAT
CTCTGCATCGTCGCCACTCGACACGCTATGAAGACTTCTAAAAAACATGAAACATTTCAT
ATTATGTATATTCATGTTGCTTCCTTACCTGAGTCATATCTGTTACACTTATTTGCATAT
TTATAAGTTTAAACTCTTAATGGCTTTAGTATCTTATTCCAGATATACCCATTAAAAAAA
ATCGTTTTAAACACATCATGAAGTGAAAGAATCTTGAACATTAAAATGATGATGAATTAT
ACTGAGTACAACATGGTACAAATCCTGCCCAGTAATCGACGTCGTCGTTATGTACATCGG
GGTTTAGGTGTTTGCGATTTTAATACGATTTTTTTCTTTTCCTGATCCCATCTATGTCGG
ATCCTAGTTCCCATGCCCAAAGAAAATGCAGATCAACTTGACTGGATTCCTAAATGGAAA
GAACGCACGCCTTTTCATGGGAGAGTTATGGGAGCTGTTGCTGAGCGCGCAGGCCAGTGA
AAACGGTATACCCGAATCATTTACTCAGCAGAAGAAAGAAGAAATAAAGAAGAGAATGGA
GGAGCAGCAGAACAAGGACAAAGACAAGGAGCGACGGAGATCGAGGTCCCGGTCGCGTTC
CCGGCGCCGCTCTCGCGACCGACGGCGCTCGCGAACTCGTTCTCGTGATCGTTCCAGTGA
CAGAAAGCATCGTAACGGCGGAAGTCCGCGTCGATCGAGACGGCGCAGCAGCCCGATCAG
AGACAAGGTCAGCCCTGCGAAAACTGAACCGGAAACCAAAGCTCCAAGTGTAGCAGAGAA
CGGTAAGTCACCAGAAAAGAATGAAGAAGAGGTTAAAGAAGAACCAGTTCAGAATAATTC
TCCAACTGTCAATGAACCTGTCAATGATGAAAACAAGGAACCAACCATAACACAGAACGT
TGAAGAGAAATCTGAAGTTGAAGGTCAGAAATCTAGATCTGTGTCACCTGCTAAGTCAAC
GGACGAGAAAGAGAAAACCAATGATGAGAAACCTGCTGATAAGTCGCGCCGATCATCTAG
CGAAAGACGCTCGTCTTCAGCTTCATCCCGTGGCAGTGTGAAGAAGAGATCGTCACATAA
AAAACGACAATACCGTTCGAATCGTGATTCTTCTACAAGTGTTAGCCCTAGGCGCAGCTC
CCGAAGAGAAAGGAGTAAATCTCGCCGTAGGAGCAGCCGACGTAGGTCGTTAGATCGTCG
TGAGAGGGAAAGAGAACGGGAGAGAGAAAGAGAACGCGAACGTGAAAGAGAGCGACGACG
CCGTGAACGAGAACGGCGTGAGAGGTCGAGAGAACGTCGACGATCGCTTGAAAGACGCAG
ACGGTCGCGTTCACGCTCTCGACGACGTTCAAGAGACAGGTCTCGAGACCGTCGCCGCTC
CCGTTCACGTCGCAGGTCGCGGTCGAGGCGTCGCTCAGGACGCAGGTCACGCGACCGACG
CTCACGTGATCGCCGCTCCAAAGACCGCCGCTCACGAGATAAGTCCAGAGAGCGGAAATC
GCGCGATCGCTCCAGGAGATCCAGGGACAGGAAATCTCGCGATAGAAGGTCTAGCGATAT
TATCAAGGAGCGTTTAGAGAAATCTGTCTCGATTCCGAGAAAAGAAAATAATGACAAATT
ACCCAAAAAGCCTGAGCACCTGCCTATTCCGCGTGAGCAATCTAAAGAGCGCATTATATC
TAGCACAAGCCGAGAATCATCAGTAGCTGTTGAAAAACCCCCACCAGAACCTTTTAATGA
CGGAAAAACCCAGTCAGACCACACTGACGACGAAGAGAAAGAAGATATTGTAAATATTCC
AAACCTGCGTGAATACTCAAAAAGTCTTTCACGCACTCCATCACCGTTCTTGCGAAGACA
TGAAATTGACAAAAATAAGAAATCTGATGAAGTTTCGGGAAAAGAGCAGAATGAGGACGA
AATAAAAACCAAGGAATCCAAAAGAGCTAAACGTAAAGCCCATCAATCAGATTCTGAAAG
TGCGAGTAGCGAGGAGCTATCGAAATCCAAAAGTAAGTCCAAAATCAAGCGTAAGGAGAA
GGGTACATCTAAGAGAAATAAGAAACTCAAAAAAGAGAGCTCTTCTAGCGATAGCGATTC
TGAGGAATCTTCTTCTAGTGAATCTGAAGAAGATAGGAAGAAGAAAAGCAAAAAGAATGC
TAAAAAGAAGTTGGCCAAGAAATCAAGAAAGAAAAGAGCTCGCTCGTCGAGCTCCGACTC
CAGTTCGGAAGAAGAAGTTAAACACAAGGCTTCAAAGACAAAACAAAAAAATGTCGTCGA
CGAATCTGATGTTGATAAGAAGTCTAAAAAACGCGCCAAGGATGCGAGTAGCGAAAGGTC
AAGGTCTGAGAAAGTTGAAAACAAGCTCAAGTCCAAAAAAGTCGATTCTGAGGATTCCCA
AGATGATAGTTCGGATACTGATGCAAAATCTAAGAAGAAAAACCCTAAACGTGATACTTC
TAGTTCAGAAAAAGACCCAAAACGCGGTAAAAAAACTGACTCTATTAAGGAAAAAGCCTT
ATCACCAGAAGTTGCTAAATTAAAGAAAGTAGAGGATAAACCAGCAAAAGTGAAAGTAGA
CGATGCTAAACCTAAATCTCGTGACGAAAACGAGAAAAAACCTAAAAAGAGGGAAAAGGA
AGAGTCCTCTTCTGAAAGTGACCAGGTGTCAAAGAAGAAAGCAAGGAAGAAGGTAACAGA
CTCAGAGTCAGATTCAGACAGTGATGAACCTAAGAAATCCAAGAAAAATAAGAAACATAA
GAAGCATTCTAAAAAGCATAAGAAACACAAGAAGCATAAGAAATCATCAAAGAAAAAAGA
GGATTCTTCTGATAGCGATGAAGCCGAGGAAGAAGAGGAAGAAGGAAAAGTTAATAACGA
AGATTTGGAAAAGAAACTGAGAGAGAGAGCATTGAAGTCGATGAAGAAACAAACTAGTGT
TTCTGGATCCGATTAGTGTTCGGTTTTTTTTCTATTTGACTTCTAAGAAAAATTTCATTG
AACGTACAGCAGATCGG
(3137 bp)

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