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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoASG_c28954_g1_i2
Scaffold_idBomo_Chr22
NCBI non-redundant
(nr)		serine/arginine_repetitive_matrix_protein_1_isoform_X2_[Bombyx_mori]
Ontology
GO:0000375 P RNA splicing, via transesterification reactions
GO:0000398 P mRNA splicing, via spliceosome
GO:0003677 F DNA binding
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005681 C spliceosomal complex
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0016363 C nuclear matrix
GO:0016607 C nuclear speck
Transcript
Level		FPKM:62.63 TPM:48.04
ORF EntryO_BomoASG15152_complete:A_BomoASG_c28954_g1_i2
Sequence
(Nucleotide)
CGAACAAATACATATTAGCAATGGCGACGGCATAGTTGTACGATAACTGCGTAGCTGATT
TATTTTATATTGTGTGTAACCAATTTGACTTATCATTGGCGTCCTCACGCCTAACAACGG
GGCCTTATAACCCCACAAATTTACACCGGAAGAAGTATTGATTTCTCCGTTAGCAAGATG
ATGATGTATACGGGAACTAGTACAGAGCAGGACACCCGCTTCAGTGACAAGGAGAAGAAG
CTGATGAAGCAAATGAAGTTTGGAGATTGCCTCACTCAGCAGGTTGACATGTCAAAAGTG
AAGCTCGACGTGCTGAAGCCGTGGATCACTCAAAAGATAACAGAAATTCTAAACATGGAA
GATGATGTTGTCATTGAATATGTCACCAACCAGCTTGAAGAAAAGTTCCCATGCCCAAAG
AAAATGCAGATCAACTTGACTGGATTCCTAAATGGAAAGAACGCACGCCTTTTCATGGGA
GAGTTATGGGAGCTGTTGCTGAGCGCGCAGGCCAGTGAAAACGGTATACCCGAATCATTT
ACTCAGCAGAAGAAAGAAGAAATAAAGAAGAGAATGGAGGAGCAGCAGAACAAGGACAAA
GACAAGGAGCGACGGAGATCGAGGTCCCGGTCGCGTTCCCGGCGCCGCTCTCGCGACCGA
CGGCGCTCGCGAACTCGTTCTCGTGATCGTTCCAGTGACAGAAAGCATCGTAACGGCGGA
AGTCCGCGTCGATCGAGACGGCGCAGCAGCCCGATCAGAGACAAGGTCAGCCCTGCGAAA
ACTGAACCGGAAACCAAAGCTCCAAGTGTAGCAGAGAACGGTAAGTCACCAGAAAAGAAT
GAAGAAGAGGTTAAAGAAGAACCAGTTCAGAATAATTCTCCAACTGTCAATGAACCTGTC
AATGATGAAAACAAGGAACCAACCATAACACAGAACGTTGAAGAGAAATCTGAAGTTGAA
GGTCAGAAATCTAGATCTGTGTCACCTGCTAAGTCAACGGACGAGAAAGAGAAAACCAAT
GATGAGAAACCTGCTGATAAGTCGCGCCGATCATCTAGCGAAAGACGCTCGTCTTCAGCT
TCATCCCGTGGCAGTGTGAAGAAGAGATCGTCACATAAAAAACGACAATACCGTTCGAAT
CGTGATTCTTCTACAAGTGTTAGCCCTAGGCGCAGCTCCCGAAGAGAAAGGAGTAAATCT
CGCCGTAGGAGCAGCCGACGTAGGTCGTTAGATCGTCGTGAGAGGGAAAGAGAACGGGAG
AGAGAAAGAGAACGCGAACGTGAAAGAGAGCGACGACGCCGTGAACGAGAACGGCGTGAG
AGGTCGAGAGAACGTCGACGATCGCTTGAAAGACGCAGACGGTCGCGTTCACGCTCTCGA
CGACGTTCAAGAGACAGGTCTCGAGACCGTCGCCGCTCCCGTTCACGTCGCAGGTCGCGG
TCGAGGCGTCGCTCAGGACGCAGGTCACGCGACCGACGCTCACGTGATCGCCGCTCCAAA
GACCGCCGCTCACGAGATAAGTCCAGAGAGCGGAAATCGCGCGATCGCTCCAGGAGATCC
AGGGACAGGAAATCTCGCGATAGAAGGTCTAGCGATATTATCAAGGAGCGTTTAGAGAAA
TCTGTCTCGATTCCGAGAAAAGAAAATAATGACAAATTACCCAAAAAGCCTGAGCACCTG
CCTATTCCGCGTGAGCAATCTAAAGAGCGCATTATATCTAGCACAAGCCGAGAATCATCA
GTAGCTGTTGAAAAACCCCCACCAGAACCTTTTAATGACGGAAAAACCCAGTCAGACCAC
ACTGACGACGAAGAGAAAGAAGATATTGTAAATATTCCAAACCTGCGTGAATACTCAAAA
AGTCTTTCACGCACTCCATCACCGTTCTTGCGAAGACATGAAATTGACAAAAATAAGAAA
TCTGATGAAGTTTCGGGAAAAGAGCAGAATGAGGACGAAATAAAAACCAAGGAATCCAAA
AGAGCTAAACGTAAAGCCCATCAATCAGATTCTGAAAGTGCGAGTAGCGAGGAGCTATCG
AAATCCAAAAGTAAGTCCAAAATCAAGCGTAAGGAGAAGGGTACATCTAAGAGAAATAAG
AAACTCAAAAAAGAGAGCTCTTCTAGCGATAGCGATTCTGAGGAATCTTCTTCTAGTGAA
TCTGAAGAAGATAGGAAGAAGAAAAGCAAAAAGAATGCTAAAAAGAAGTTGGCCAAGAAA
TCAAGAAAGAAAAGAGCTCGCTCGTCGAGCTCCGACTCCAGTTCGGAAGAAGAAGTTAAA
CACAAGGCTTCAAAGACAAAACAAAAAAATGTCGTCGACGAATCTGATGTTGATAAGAAG
TCTAAAAAACGCGCCAAGGATGCGAGTAGCGAAAGGTCAAGGTCTGAGAAAGTTGAAAAC
AAGCTCAAGTCCAAAAAAGTCGATTCTGAGGATTCCCAAGATGATAGTTCGGATACTGAT
GCAAAATCTAAGAAGAAAAACCCTAAACGTGATACTTCTAGTTCAGAAAAAGACCCAAAA
CGCGGTAAAAAAACTGACTCTATTAAGGAAAAAGCCTTATCACCAGAAGTTGCTAAATTA
AAGAAAGTAGAGGATAAACCAGCAAAAGTGAAAGTAGACGATGCTAAACCTAAATCTCGT
GACGAAAACGAGAAAAAACCTAAAAAGAGGGAAAAGGAAGAGTCCTCTTCTGAAAGTGAC
CAGGTGTCAAAGAAGAAAGCAAGGAAGAAGGTAACAGACTCAGAGTCAGATTCAGACAGT
GATGAACCTAAGAAATCCAAGAAAAATAAGAAACATAAGAAGCATTCTAAAAAGCATAAG
AAACACAAGAAGCATAAGAAATCATCAAAGAAAAAAGAGGATTCTTCTGATAGCGATGAA
GCCGAGGAAGAAGAGGAAGAAGGAAAAGTTAATAACGAAGATTTGGAAAAGAAACTGAGA
GAGAGAGCATTGAAGTCGATGAAGAAACAAACTAGTGTTTCTGGATCCGATTAGTGTTCG
GTTTTTTTTCTATTTGACTTCTAAGAAAAATTTCATTGAACGTACAGCAGATCGG
(3055 bp)

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