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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoASG_c28954_g1_i1
Scaffold_idBomo_Chr22
NCBI non-redundant
(nr)		serine/arginine_repetitive_matrix_protein_1_isoform_X3_[Bombyx_mori]
Ontology
GO:0000375 P RNA splicing, via transesterification reactions
GO:0000398 P mRNA splicing, via spliceosome
GO:0003677 F DNA binding
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005681 C spliceosomal complex
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0016363 C nuclear matrix
GO:0016607 C nuclear speck
Transcript
Level		FPKM:7.61 TPM:5.84
ORF EntryO_BomoASG15149_complete:A_BomoASG_c28954_g1_i1
Sequence
(Nucleotide)
GGAAAATTAAATAATTACAAGATAACTCATAATTAAATGAAGAAGAGTTTTCAGAAAAGG
AAAATAACTAAAATACATAATTAGAGTATTAGTTCCCCAAAGCCATTAAGAGGTGATTTG
ACTCAGTGCAAGGAAGTTTTGTCGTTAGGCTTTGCGTTCAGCATAATGTGGTTGTTATCG
CAACACCCTTACAGATGCAAGTTTTGAAGAGGGCGAGTGTGCGGTGAGTGTTGGCGCGGG
GCGTCATATGCAGAGCATCACATCGGTCTACAACTTCGCTGCGCCCTCATCATCTCTGCA
TCGTCGCCACTCGACACGCTATGAAGACTTCTAAAAAACATGAAACATTTCATATTATGT
ATATTCATGTTGCTTCCTTACCTGAGTCATATCTGTTACACTTATTTGCATATTTATAAG
TTTAAACTCTTAATGGCTTTAGTATCTTATTCCAGATATACCCATTAAAAAAAATCGTTT
TAAACACATCATGAAGTGAAAGAATCTTGAACATTAAAATGATGATGAATTATACTGAGT
ACAACATGGTACAAATCCTGCCCAGTAATCGACGTCGTCGTTATGTACATCGGGGTTTAG
GTGTTTGCGATTTTAATACGATTTTTTTCTTTTCCTGATCCCATCTATGTCGGATCCTAG
TTCCCATGCCCAAAGAAAATGCAGATCAACTTGACTGGATTCCTAAATGGAAAGAACGCA
CGCCTTTTCATGGGAGAGTTATGGGAGCTGTTGCTGAGCGCGCAGGCCAGTGAAAACGGT
ATACCCGAATCATTTACTCAGCAGAAGAAAGAAGAAATAAAGAAGAGAATGGAGGAGCAG
CAGAACAAGGACAAAGACAAGGAGCGACGGAGATCGAGGTCCCGGTCGCGTTCCCGGCGC
CGCTCTCGCGACCGACGGCGCTCGCGAACTCGTTCTCGTGATCGTTCCAGTGACAGAAAG
CATCGTAACGGCGGAAGTCCGCGTCGATCGAGACGGCGCAGCAGCCCGATCAGAGACAAG
GTCAGCCCTGCGAAAACTGAACCGGAAACCAAAGCTCCAAGTGTAGCAGAGAACGGTAAG
TCACCAGAAAAGAATGAAGAAGAGGTTAAAGAAGAACCAGTTCAGAATAATTCTCCAACT
GTCAATGAACCTGTCAATGATGAAAACAAGGAACCAACCATAACACAGAACGTTGAAGAG
AAATCTGAAGTTGAAGGTCAGAAATCTAGATCTGTGTCACCTGCTAAGTCAACGGACGAG
AAAGAGAAAACCAATGATGAGAAACCTGCTGATAAGTCGCGCCGATCATCTAGCGAAAGA
CGCTCGTCTTCAGCTTCATCCCGTGGCAGTGTGAAGAAGAGATCGTCACATAAAAAACGA
CAATACCGTTCGAATCGTGATTCTTCTACAAGTGTTAGCCCTAGGCGCAGCTCCCGAAGA
GAAAGGAGTAAATCTCGCCGTAGGAGCAGCCGACGTAGGTCGTTAGATCGTCGTGAGAGG
GAAAGAGAACGGGAGAGAGAAAGAGAACGCGAACGTGAAAGAGAGCGACGACGCCGTGAA
CGAGAACGGCGTGAGAGGTCGAGAGAACGTCGACGATCGCTTGAAAGACGCAGACGGTCG
CGTTCACGCTCTCGACGACGTTCAAGAGACAGGTCTCGAGACCGTCGCCGCTCCCGTTCA
CGTCGCAGGTCGCGGTCGAGGCGTCGCTCAGGACGCAGGTCACGCGACCGACGCTCACGT
GATCGCCGCTCCAAAGACCGCCGCTCACGAGATAAGTCCAGAGAGCGGAAATCGCGCGAT
CGCTCCAGGAGATCCAGGGACAGGAAATCTCGCGATAGAAGGTCTAGCGATATTATCAAG
GAGCGTTTAGAGAAATCTGTCTCGATTCCGAGAAAAGAAAATAATGACAAATTACCCAAA
AAGCCTGAGCACCTGCCTATTCCGCGTGAGCAATCTAAAGAGCGCATTATATCTAGCACA
AGCCGAGAATCATCAGTAGCTGTTGAAAAACCCCCACCAGAACCTTTTAATGACGGAAAA
ACCCAGTCAGACCACACTGACGACGAAGAGAAAGAAGATATTGTAAATATTCCAAACCTG
CGTGAATACTCAAAAAGTCTTTCACGCACTCCATCACCGTTCTTGCGAAGACATGAAATT
GACAAAAATAAGAAATCTGATGAAGTTTCGGGAAAAGAGCAGAATGAGGACGAAATAAAA
ACCAAGGAATCCAAAAGAGCTAAACGTAAAGCCCATCAATCAGATTCTGAAAGTGCGAGT
AGCGAGGAGCTATCGAAATCCAAAAGTAAGTCCAAAATCAAGCGTAAGGAGAAGGGTACA
TCTAAGAGAAATAAGAAACTCAAAAAAGAGAGCTCTTCTAGCGATAGCGATTCTGAGGAA
TCTTCTTCTAGTGAATCTGAAGAAGATAGGAAGAAGAAAAGCAAAAAGAATGCTAAAAAG
AAGTTGGCCAAGAAATCAAGAAAGAAAAGAGCTCGCTCGTCGAGCTCCGACTCCAGTTCG
GAAGAAGAAGTTAAACACAAGGCTTCAAAGACAAAACAAAAAAATGTCGTCGACGAATCT
GATGTTGATAAGAAGTCTAAAAAACGCGCCAAGGATGCGAGTAGCGAAAGGTCAAGGTCT
GAGAAAGTTGAAAACAAGCTCAAGTCCAAAAAAGTCGATTCTGAGGATTCCCAAGATGAT
AGTTCGGATACTGATGCAAAATCTAAGAAGAAAAACCCTAAACGTGATACTTCTAGTTCA
GAAAAAGACCCAAAACGCGGTAAAAAAACTGACTCTATTAAGGAAAAAGCCTTATCACCA
GAAGTTGCTAAATTAAAGAAAGTAGAGGATAAACCAGCAAAAGTGAAAGTAGACGATGCT
AAACCTAAATCTCGTGACGAAAACGAGAAAAAACCTAAAAAGAGGGAAAAGGAAGAGTCC
TCTTCTGAAAGTGACCAGGTGTCAAAGAAGAAAGCAAGGAAGAAGGTAACAGACTCAGAG
TCAGATTCAGACAGTGATGAACCTAAGAAATCCAAGAAAAATAAGAAACATAAGAAGCAT
TCTAAAAAGCATAAGAAACACAAGAAGCATAAGAAATCATCAAAGAAAAAAGAGGATTCT
TCTGATAGCGATGAAGCCGAGGAAGAAGAGGAAGAAGGAAAAGTTAATAACGAAGATTTG
GAAAAGAAACTGAGAGAGAGAGCATTGAAGTCGATGAAGAAACAAACTAGTGTTTCTGGA
TCCGATTAGTGTTCGGTTTTTTTTCTATTTGACTTCTAAGAAAAATTTCATTGAACGTAC
AGCAGATCGG
(3310 bp)

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