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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoASG_c28903_g1_i5
Scaffold_idBomo_Chr24
NCBI non-redundant
(nr)		basic_salivary_proline-rich_protein_2,_partial_[Bombyx_mori]
Ontology
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0001103 F RNA polymerase II-specific DNA-binding transcription factor binding
GO:0001106 F transcription corepressor activity
GO:0003713 F transcription coactivator activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006366 P transcription by RNA polymerase II
GO:0015629 C actin cytoskeleton
GO:0044822 F RNA binding
GO:0070064 F proline-rich region binding
Transcript
Level		FPKM:2.88 TPM:2.21
ORF EntryO_BomoASG15059_complete:A_BomoASG_c28903_g1_i5
Sequence
(Nucleotide)
CCATCGGCGGCCATCTTGACGGCGCCATGTTTTGACTTTTAATTTTCATGCGCTCGCGGA
ACTTAATTCTAGTGCGTATTACTTCAAGTGATAAACTGTTTTAGGCATGTGGACATAGTA
TTCAGTGAAAAACGATAAATAGCTCACATAATGGAAGATGGTTATATGGAACAGCAGGAC
GTGTCGTTGAACGAAGTTAGCCGAAGCGACGCACCCGAAGCAGAGGCTGGGAAGGACTTC
GCCGAATACACTGGTTATGAAGAAGGTTACGAAGAGGAAGACGGCGGTAACAACTTTCGC
GGTAATCGGGGCCGTGGGAGCTTCAGAAGCCGTGGTCGCGGCCCCCCGCCTGGTTGGATG
AACGGTCCGCCGCCGCCTATGCGATTTCGTGGACGCGGCTACGGACCCACAGGACCTCCA
ATGCGCGGACGAGGCTTCTTCAGAGGACGGGGCGGACCCCGTTTCGGACCCAATGGACCG
AATTTCGACAACAATTGGGGACCGATGGGTCCCCCGCCTCCCAACATGATGTGTCCGCCG
CCCTTCGGCCCCCCTCCCGGCATGATGCCTCCCGGGGGGCCGATGGGTCCCCCTCCTAAT
ATGATGAATCAGCCCCCATATGGAGGACCACCTGGTATGCCGCCCCCTGGTATGAACCCT
GAAGTATGGGTGGAAACGAAGACAGATGAAGGCAAATCATACTATTACCATGCTCGGTCC
CGGGAAACTACATGGACCAGGCCAGTGGAGGGACCGAACTGCAAGGTCATCACACACGGT
GAGATGGAGATACTGGTAGCTTCAGGACAAATCCCCCAAATATCGGCACAAGGGGTCGGC
ATGAACGGTCCCATGGGCCAGGCGCCGCTCGTGATGCCCAACGGCATGATGCTGCCCGGC
GCGCAGCACCAGTACATGGGGCCGCCGCCCTGGGGGAAGGACGATAAAGACAAAGCCTCT
GAGTCTGTAGTGAGCAGTATGACTGATAACGATGAAATGCCACCGGGAGAAGCAGTCCCT
GGACAGCAGCAAACCAATGGTTACAACGCATACCAGCAGGGAGAGTCATACGGGCCCCCG
GGCTGGCCGGCCTGGGGCTGGCCTCCCGCCGTGAACAACCCCAGCAACCCCGAAGCGGCC
CCGGGCGCGTGGCCTAGCAGCGGCGCCGCGCCGCAGTGCGAGCCCGCAGAGCAGCCCCGG
GCGCCGCCCACCGTGCCCATGCCCAAGAAGGAAACCGTGATCTCGCCCAAGCTGCTGGAG
CTGGCGGCGGAGTGGACGAGCCACAAGGCGCCGGACGGCCGCCCCTACTACTACAACGCC
AGCAAGCAGGAGAGCGTCTGGGAGAAGCCCGCAGTGCTCAAGGAACTCGACGATATAAAA
TCCTTGATAGCCGCCGAGAAGGGCGAGAAATATCCTAATATAGAAATAGATCCCAGCAAA
ATAGTGGTCATCGACGTTGAAGAGGACGAGGAACCGCAGAGCAACACCGATGCGGAGAAG
GAAGCCGCCGCCGCCGAGAAGGAGAAGCAGAAAGAGGAGAAGGAAAAGGCGGAGAAGGAG
CGACTCGAGAAGGAAAAGGCGGACAAGGAGAAGACCGAGAAGGAAGCTGCCGAGAAGGAG
AAGGCGAAGCACGGCAGGAGACCCATCTCTACCACGCCCATCGTAGGAACGCCTTGGTGC
GTCGTGTGGACGGACGACGGGCGCGTGTTCTTCCACAACCCCACCGAGCTCACGTCCGTG
TGGGACCGCCCCGAGCTGCTCATCGGCCGCCCCGACGTGGACCGCGCCGTCACCAACCCG
CCCGCCGCCGTGCTCGACCTGCTGCGCATCACGTCCACCGTGGGCGGCAAGGAGTCGGAG
CCCGGCGTGTCCAGCACCACGCCCTCCGTCACCAGCACCGCCGACACCAAGCGCCCGGCC
GACGCCGACGCGGACGCCGCCGCCGCCGCCGCCACCGCCGCCAAGAAACCAAAGATTGAA
GAAAAGCTGGAGGAGGTGAGCCCGGCGGAGGCGGAGGCGCGGGCGGCGCGCGTGCGCGTG
GCGGTGCCGCACGAGCAGCGCGTGGCGTCGTTCCGCGCCATGCTGCGCGAGAAGAACGTC
TCCGCCTTCAGCACCTGGGACAAGGAGCTGCACAAGATCGTCTTCGAGCCGCGCTACCTC
GTGCTCAACTGCAAGGAGCGGCGCCAGATATTTAATCAGTACGTGACAGAACGCGCCGAG
GAAGAGAGGAAGGAGAAGAAAAACCGATTGCTAGCAAAGAAGGCGAACTTCAAGCAACTC
TTGGACGAAGCCAAGCTTCATACAAAGTCCTCGTTCCTGGACTTCTCCTCCAAGCACGGC
CGAGACGAGCGGTTCAAGGCGATAGAGAAGCCGCGGGACAGGGAGGTATACTTCAACGAG
TACCTCGCCGAGATCAGGAAGAGGGACAAGGAGGAGAAGGAGCGGAAGAGAGAACAGGAC
AGGCCAGGAACGTAACGGAACTAAACAATGTTAGATAAATGTATCGTCAAACGATGACGC
CTTACCGACGAGCCTCCCTAAGGCTAAACTGGAATTCATAGCGCTGCTCAAAGAGAAGTC
GGTGGACCGCCACGCCAGGTGGGTCGATGTCAAGAAGAAGCTGGACTCGGAGGCGCGGTA
CAAGGCCGTGGAGACCAGCGGCCTGCGCGAGGACTACTTCCGGGAGTACTGCAAGCTCGT
CAAGGAGGAGAGGAAGAAAGAAAAGGACGGGAAAGACAAGGGTGTTAGTAAGAAAGAGAA
AAAAGACAAAGAACGCGATAAGGAGAAGAAGAAGAAAGAGAAGGGAGAGAAACAATCGGA
CCAGTCCAACGAGGAGGAGAACAAGCAGCCCACCCCGCCCCCCGACCAGTGGGCCGACAT
CCTCGGCATCCCCCGGGATGGCGATAAGGGCAAGTCGGCGCGGGGCAAAAAGCCGCCCCC
CGCCAAGCCGGAGTCTCCGCCCAGCTCGCCCGACGAGCAGCTCTGTCCCCCCAAGCAACT
CCGCTCCGCCAAGAAGGACCAGCCGCCGCCCGCGGACAAGTCCTCGCCCAAGAAACGCAA
GACGGACGAGTTCAAGTCGCCCGAACCGGACAAGAAAGTGGAGAAGAAGAAGGGAGATAA
AACCGAGAAGAAAAAGAGGAAGAAGAGTGAGAAAGATTAGTGTTTGTTGTACGTCTTTTG
TAAACGGTAATCGAAGCTGTTGGCGCGGGCCGGTGCCGGAACGAGCCGTCGCGCGGACGG
TCACCACTTACCGTCGGACGTGCCGGCCGCGGTGCAGCGCTAACGTATCGTATTGTAAAT
ACTATATATATATATATATACATACATTGTGTAACGACCTAGTTATTATATTGATTCGAT
TGTTTGATGGTGTCGCTTACCGCGTCAAGAGTCGTACGTACAAACATTTAAGGACATTAT
AGAAATTATATAAGTTTAATGAAATAGGTTTTGTGTGTTGCTTTTGTAATAATATAAATA
TTAGTGCGCCCCTACTGTTAGTCGTGACGTCACGCCGCGCGCTCCCCAAGGGGGGGGGAC
AGCTGGCCCCCTGTCGGTCCCAGTGATGCAGTCGCCTCTGTCAGTGCCCCTTCTGCTACA
GCGTCAAGTCTTTAGCACGTGGAATTCCCCTCAAGGTTTCCAACTGTGTCCAAAGTTCTT
CACTAAACACTTCAGCTATACCACACCGCGTACGCGCAGACGTTCTCATTCCTCATTTGC
TTAGATTACGCATTACAGTGCTTCCCAAAGTTGTCGAGTTGACACCCCCATCCCCCCTAT
TGAGTTACCTATAATAGCACAAGCTCTTAACCGCCTGACGCAGAGCGATCACCGGAGTCG
GTGAACCTCATGACCGACGATGAGGCAGGAGTTCACAGGCTCCGTTATATTGTTTTTTTT
TCTTCCTACCTATGCTGATAGCCTTGGGCTACATCAGCTTCTCCTTGACGTGTAAGTGAG
CTCACGGGGCTGAAACCGGGTGTGTTGCTAACACTGGCCCTAGCA
(4005 bp)

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