SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoASG_c28903_g1_i2
Scaffold_idBomo_Chr24
NCBI non-redundant
(nr)		basic_salivary_proline-rich_protein_2,_partial_[Bombyx_mori]
Ontology
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0001103 F RNA polymerase II-specific DNA-binding transcription factor binding
GO:0001106 F transcription corepressor activity
GO:0003713 F transcription coactivator activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006366 P transcription by RNA polymerase II
GO:0015629 C actin cytoskeleton
GO:0044822 F RNA binding
GO:0070064 F proline-rich region binding
Transcript
Level		FPKM:3.47 TPM:2.66
ORF EntryO_BomoASG15048_complete:A_BomoASG_c28903_g1_i2
Sequence
(Nucleotide)
CCATCGGCGGCCATCTTGACGGCGCCATGTTTTGACTTTTAATTTTCATGCGCTCGCGGA
ACTTAATTCTAGTGCGTATTACTTCAAGTGATAAACTGTTTTAGGCATGTGGACATAGTA
TTCAGTGAAAAACGATAAATAGCTCACATAATGGAAGATGGTTATATGGAACAGCAGGAC
GTGTCGTTGAACGAAGTTAGCCGAAGCGACGCACCCGAAGCAGAGGCTGGGAAGGACTTC
GCCGAATACACTGGTTATGAAGAAGGTTACGAAGAGGAAGACGGCGGTAACAACTTTCGC
GGTAATCGGGGCCGTGGGAGCTTCAGAAGCCGTGGTCGCGGCCCCCCGCCTGGTTGGATG
AACGGTCCGCCGCCGCCTATGCGATTTCGTGGACGCGGCTACGGACCCACAGGACCTCCA
ATGCGCGGACGAGGCTTCTTCAGAGGACGGGGCGGACCCCGTTTCGGACCCAATGGACCG
AATTTCGACAACAATTGGGGACCGATGGGTCCCCCGCCTCCCAACATGATGTGTCCGCCG
CCCTTCGGCCCCCCTCCCGGCATGATGCCTCCCGGGGGGCCGATGGGTCCCCCTCCTAAT
ATGATGAATCAGCCCCCATATGGAGGACCACCTGGTATGCCGCCCCCTGGTATGAACCCT
GAAGTATGGGTGGAAACGAAGACAGATGAAGGCAAATCATACTATTACCATGCTCGGTCC
CGGGAAACTACATGGACCAGGCCAGTGGAGGGACCGAACTGCAAGGTCATCACACACGGT
GAGATGGAGATACTGGTAGCTTCAGGACAAATCCCCCAAATATCGGCACAAGGGGTCGGC
ATGAACGGTCCCATGGGCCAGGCGCCGCTCGTGATGCCCAACGGCATGATGCTGCCCGGC
GCGCAGCACCAGTACATGGGGCCGCCGCCCTGGGGGAAGGACGATAAAGACAAAGCCTCT
GAGTCTGTAGTGAGCAGTATGACTGATAACGATGAAATGCCACCGGGAGAAGCAGTCCCT
GGACAGCAGCAAACCAATGGTTACAACGCATACCAGCAGGGAGAGTCATACGGGCCCCCG
GGCTGGCCGGCCTGGGGCTGGCCTCCCGCCGTGAACAACCCCAGCAACCCCGAAGCGGCC
CCGGGCGCGTGGCCTAGCAGCGGCGCCGCGCCGCAGTGCGAGCCCGCAGAGCAGCCCCGG
GCGCCGCCCACCGTGCCCATGCCCAAGAAGGAAACCGTGATCTCGCCCAAGCTGCTGGAG
CTGGCGGCGGAGTGGACGAGCCACAAGGCGCCGGACGGCCGCCCCTACTACTACAACGCC
AGCAAGCAGGAGAGCGTCTGGGAGAAGCCCGCAGTGCTCAAGGAACTCGACGATATAAAA
TCCTTGATAGCCGCCGAGAAGGGCGAGAAATATCCTAATATAGAAATAGATCCCAGCAAA
ATAGTGGTCATCGACGTTGAAGAGGACGAGGAACCGCAGAGCAACACCGATGCGGAGAAG
GAAGCCGCCGCCGCCGAGAAGGAGAAGCAGAAAGAGGAGAAGGAAAAGGCGGAGAAGGAG
CGACTCGAGAAGGAAAAGGCGGACAAGGAGAAGACCGAGAAGGAAGCTGCCGAGAAGGAG
AAGGCGAAGCACGGCAGGAGACCCATCTCTACCACGCCCATCGTAGGAACGCCTTGGTGC
GTCGTGTGGACGGACGACGGGCGCGTGTTCTTCCACAACCCCACCGAGCTCACGTCCGTG
TGGGACCGCCCCGAGCTGCTCATCGGCCGCCCCGACGTGGACCGCGCCGTCACCAACCCG
CCCGCCGCCGTGCTCGACCTGCTGCGCATCACGTCCACCGTGGGCGGCAAGGAGTCGGAG
CCCGGCGTGTCCAGCACCACGCCCTCCGTCACCAGCACCGCCGACACCAAGCGCCCGGCC
GACGCCGACGCGGACGCCGCCGCCGCCGCCGCCACCGCCGCCAAGAAACCAAAGATTGAA
GAAAAGCTGGAGGAGGTGAGCCCGGCGGAGGCGGAGGCGCGGGCGGCGCGCGTGCGCGTG
GCGGTGCCGCACGAGCAGCGCGTGGCGTCGTTCCGCGCCATGCTGCGCGAGAAGAACGTC
TCCGCCTTCAGCACCTGGGACAAGGAGCTGCACAAGATCGTCTTCGAGCCGCGCTACCTC
GTGCTCAACTGCAAGGAGCGGCGCCAGATATTTAATCAGTACGTGACAGAACGCGCCGAG
GAAGAGAGGAAGGAGAAGAAAAACCGATTGCTAGCAAAGAAGGCGAACTTCAAGCAACTC
TTGGACGAAGCCAAGCTTCATACAAAGTCCTCGTTCCTGGACTTCTCCTCCAAGCACGGC
CGAGACGAGCGGTTCAAGGCGATAGAGAAGCCGCGGGACAGGGAGGTATACTTCAACGAG
TACCTCGCCGAGATCAGGAAGAGGGACAAGGAGGAGAAGGAGCGGAAGAGAGAACAGGAC
AGGCCAGGAACGTAACGGAACTAAACAATGTTAGATAAATGTATCGTCAAACGATGACGC
CTTACCGACGAGCCTCCCTAAGGTTAGAAAATATTTTAAGAAGAACAATTAGCGCCGAGC
GGCGGCGCGCCCGACTCCAAGAACCACTCGCTTGTAATTAATTGTCCGTGAAATCA
(2636 bp)

- SilkBase 1999-2023 -