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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoASG_c28874_g1_i1
Scaffold_idBomo_Chr9
NCBI non-redundant
(nr)		c-Cbl-associated_protein_isoform_A_[Bombyx_mori]
Ontology
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0005200 F structural constituent of cytoskeleton
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0005925 C focal adhesion
GO:0006936 P muscle contraction
GO:0007015 P actin filament organization
GO:0007155 P cell adhesion
GO:0008134 F transcription factor binding
GO:0017166 F vinculin binding
GO:0030054 C cell junction
GO:0031589 P cell-substrate adhesion
GO:0043410 P positive regulation of MAPK cascade
GO:0051495 P positive regulation of cytoskeleton organization
GO:0051496 P positive regulation of stress fiber assembly
Transcript
Level		FPKM:42.34 TPM:32.47
ORF EntryO_BomoASG14968_complete:A_BomoASG_c28874_g1_i1
Sequence
(Nucleotide)
TCTTCCGATCTCGGCCCTCTCACACGTCGCACGTCCGCGCTCAGTGAAGTTTCCCGCACA
TTTTCCGACAGTTTTCCGTGCGCTCATCCGTCGTACGCCTCTCCCCGCTTCGAAAACGTC
GCCACGGGAAATGTCACCCTGATATACATATAACGCCGTGTGGAGGCCGGGAGCGCCAAC
GCCCCCGCCGGCTCCGAGCACCCCGCGCAGTCCCGGCGGACCGCCGCCTCCGCCGCCCCC
GCCGGTTTGGACGCCGGGTAGCGCGGAACCATCTCCGCAACCCACACGGAAGACATTCAG
ACCAGTACATTTTGAGGAAACACCACCGAGTCGCCGGAAATTCACAAACACGGAACAAAA
CGGTTGCACCAGTGGCTCCGAGAGCGAGGGTCGACTGCGTACCTCGCAGAGTGCCCCCGC
CACCGGACTGAACACGCTGAGCGGCTCATCGTCTACTAGCCGGCTACCACGAGTGCAGAA
CCCCACTGTCACGCTCTTGCAAAAAGCGCGAGAAGGACAGTTGCCACGGGGTCCTGCTAC
ACTTCAATCAGAAAGAGACAGTGCCCGATTACCTCGTGATAGACCTTCGCCACCAAGCGG
TGACCCAGTCCATGCCTTAAGAAGAGAGTACGCGAGCGAGAGCGAAGCAGAAAGAAGAGA
TTACGAACGTGTCGGCGTTCGTAAAATGTCTGATACTCAACGGAAAGTCGACGGTGTTGG
ACCTATAACAAAAGACGGCATGCCGATTACACTTAGATCTGAAGTCAAAGATCCATCGCG
TTGGTATAAAAAGATGTACGACACGATTCATAAAAACAAATACGATGACGATTACGTGAC
AATACGATACAAAAGTCGACGAGAGGCAGCAGAAAGGGTGCCAAGCAGTAAATCTCAATA
CGCATATTTCGACCCACGTTCTGGCTACCTGAGCGAACCTGAAGGAGGATTGAGCAGGCT
CAGTGCGTTTAGTGATGCCTATGACAGCGACGTCACGACGGGCCCGAGGAGACGAACGGC
ATCCGTGCAGGAAGATCGCCGGATCAGTGACGTCAGTTCCTCTTATCTATCCAATAATAA
ATACAGTACATTAGCATCGGCAAGGGCAAGCCAAGAAGTTTACAAGAACCAGCCGGGAAG
GATTGAGAACTATGTGCCCGGGAAATCTTCAGTCGTTGATAAAGAAGCAAAGCAGTGGTG
GGACGAGGTTATGGACATTTTTGACGGGCAAAATATATCCAGCACTACCTCGTTGCCCCA
ACCTTCGCCAAAAGAGAAGAAGGATATTACTGCCGCAATTCTGTCAAAATCCAACATGGC
AAAAGCTCTGAAGGAGTCGGGCTATGAATCTGATTCTACTCTTATATTCCGCCGTCGCGA
GGAAACGGACGCTCCGCTCTCTCCAGCGGAGAGGAGGGCCGCGTATCGTGACCTGCAGGC
CGGCGGGGAGCCACCCCTACGCGGATTCCGATCTCCTGCCCCGCCACGTCAAGAGTCTCC
CCGGCGTTATGTGGAAAGCGACGTGAACATCCACTATCGGTGTCCAGTGCGACACGACCC
CTTACCTCTCGTACCCGAGAGAGAGCTTGCGAGGCAGCAGGCAGAACACATGAAGAGGCT
GTATCGAGAGCAGAAACGGAATAAATATCTGCAGGAGCTGCAAGATATGCAAAACAGGCG
TCACCAAGACAACTTCACGCCTTCACAGAAGACCGTAGTCCCTCTGAACAGATACGACGA
TGCCGACAAAGTTCTTGCAAAAGCCCTATACACTTTCAACGGTCAGACTTCTCGAGAACT
CAGTTTTAGAAAAGGAGATATAATATTTGTGCGGAGGCAGATTGACGCGAATTGGTACGA
AGGTGAAATTCATGGAAGAATTGGTCTGTTCCCGTATAATTATGTAGAGATACAGAAGGG
TGATACAATCCAAGTTATTAAGAAGCCGTCAATCGTCGAAGGCCGTGCCAGGGCGAAGTT
TGATTTCATAGCACAGACCAACCTCGAACTGCCATTGAAGAAAGGAGAAGTTGTGACTTT
GACCAGACGTATTGACCAGAACTGGTGGGAAGGCCGCAACGGCTTAAAAACGGGAATATT
CCCGGACAGCTACGTTACAATTCTACAGGAACCTAGCCAGAGCAAACCTGATCCGAGGCC
AATCTTAAACACCGATAAGCCAGCGGCGTCACCGGCCGCTCACGGTCTTCTCAACGGTTC
CGATAAAAGAAGTATGGGTTCTCATAGCTACACGCCACAGCAGAACAATCCAGCGCTCTC
CAATGCACCACCTTCCACTCAGCCACTTCCTGGTTATGTGGCGAAACCAGCCCAAGCGAC
ACTGACGCCTTCCGAACGTGGCTACGGTCCTCCAACAGGCTCGGGGGTAGATCTTAATAA
CACCGAACCCCTGTACGTCGACACTAATGCCGAAGCCATACCATATCGTGCGATGTACAA
ATACCGGCCTCAAAATCCTGACGAGCTCGAACTGAACGAAGGTGATACGGTGTACGTACT
GGAGAAATGCGACGATGGCTGGTACGTCGGCTCGAGCCAGAGAACTGGGCGCTTCGGTAC
CTTCCCAGGCAACTACGTGGAGCGTATCTGATAGCGCGAGACGTCGCTGTTCCGTCGGCT
GCGGCGCGCTGCACTGTGCGGCCGGCGGCGTCGCTGAACTGACGCACTAACACGTGCCAC
GGTACAACACGACACAACCTCCATACCATTATACAGGGTGTAACTACACCGTTCCCGAAA
TCGAAACGAGAATATATTTTTTATTGCTTAAGTGTGTGTATGGTGTTAAGTGGTTACCGG
AGCC
(2824 bp)

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