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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoASG_c28580_g1_i2
Scaffold_idBomo_Chr25
NCBI non-redundant
(nr)		bifunctional_glutamate/proline--tRNA_ligase_isoform_X1_[Bombyx_mori]
Ontology
GO:0000166 F nucleotide binding
GO:0003723 F RNA binding
GO:0003824 F catalytic activity
GO:0004812 F aminoacyl-tRNA ligase activity
GO:0004818 F glutamate-tRNA ligase activity
GO:0004827 F proline-tRNA ligase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0006412 P translation
GO:0006417 P regulation of translation
GO:0006418 P tRNA aminoacylation for protein translation
GO:0006424 P glutamyl-tRNA aminoacylation
GO:0006433 P prolyl-tRNA aminoacylation
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016874 F ligase activity
GO:0016876 F aminoacyl-tRNA ligase activity
GO:0017101 C aminoacyl-tRNA synthetase multienzyme complex
GO:0017148 P negative regulation of translation
GO:0030529 C ribonucleoprotein complex
GO:0035613 F RNA stem-loop binding
GO:0043039 P tRNA aminoacylation
GO:0051020 F GTPase binding
GO:0071346 P cellular response to interferon-gamma
GO:0097452 C GAIT complex
Transcript
Level		FPKM:27.87 TPM:21.37
ORF EntryO_BomoASG14280_complete:A_BomoASG_c28580_g1_i2
Sequence
(Nucleotide)
TGTTTGTCGGCGAGAAAAAAATTGAAATTTCGTTGAAATTTTTGATTGTCTCATTAATTA
AAATAAATAAATAACATTTTTATTTTAGATCCAAATATTCAATGATGCGGGTATCTTGCA
ATAGATCTAACCCGCCTTTAGGTGGTTTGATGGCTGTAGAATTTTACAGATCGTCGGCAA
AAGAAATAGACATCGTTTGGGAGAATGACTCAGTTATTATTCTTCCAAATTCCACCAAAC
CAGTGCCATTTGGGACTAGCAATGATTTGATTAGAATTCTTGAAAATACCTTTAACAAGT
CTGTGAGTCCACTTGAGAAAGTCACAATGAATCATTGGTTGTCTTTCAGTCTTATATTGG
AAGATGAAATACCCAAGTCTGTTGAGTATTTAGATAAAACACTAGGGCCACTAACCTATT
TGGTTGGTGAAACTTTATCTGTATCAGACTTTGCGGTCTTCAGTGTTCTTTACGTATCAA
GTAAATTCAAAGAAATTTCAAAAGTGATTCCTTCTCAAAACATAAGACGCTGGATGAAAT
TGGTAGAAGCTCAACCGCAAGTCCAAACAGCTATAAAGGCTCTGCCGTCTGATGCCCTTG
ACAAACTTACCAAAGTTTCCTCCAGGAAATCACCACCAACAAATGCTGAATCAGGAGGTA
GACAACAGGAAGGAAAGTTCATTGAACTCCCTCATGCTGAAATGGGAAAAGTTGTTGTAA
GATTTCCACCTGAAGCTTCAGGATATCTTCATATTGGTCATGCAAAAGCGGCTCTTCTTA
ATCAATATTACCAGCAAGCCTTTCATGGCAAATTGGTCATGAGATTTGATGACACAAATC
CAGCTAAAGAAAATGCAGATTTTGAAAAGGTTATTTTAGAGGATGTAGCAATGCTCGAAA
TAAAACCAGATATGTTCACACACACGTCCCAATACTTTGATTTAATGATGGAGTATTGTG
AGAAACTCATCCGTGAAAACAAAGCTTTTGTGGATGATACTCCTGCTGAACAAATGAAAA
CTGAGAGAGAACAGAAAATTGAAAGCAAAAATAGAAACAATTCCGTAGAAAGGAACCTGC
AACTGTGGGAAGAGATGAAGAAAGGCAGTAATATTGGTGTCCAATGTTGTGTACGAGCTA
AAATAGACATGCAGTCAGCAAATGGTTGCCTGCGTGATCCCACCATTTACAGGTGCAAGC
CTGAAGAACACCCAAGAACCGGCACACAATATAAAGTTTATCCGACCTACGACTTCGCGT
GTCCAATCGTGGATTCCATAGAAGGGGTAACTCACGTCCTGCGAACGATGGAGTATCATG
ATCGAGACCCGCAGTTCTACTGGTTCATAGAGGCACTTGGTATTAGAAAACCTTATATTT
GGGAGTATAGTAGATTGAGCATGACAAACACTGTACTGTCGAAAAGGAAACTAACTTGGT
TTGTGGAACAAGGACTTGTAGATGGATGGGATGACCCTCGTATGCCAACAGTACGTGGAG
TGCTGCGACGCGGTATGACCGTGGAAGCGCTACGTCAGTTTATTCACGCTCAAGGCTCCA
GCAGGTCCGTGGTGTTCATGGAATGGGATAAAATTTGGGCAATCAATAAGAAGGTCATAG
ATCCGGTGGCTCCTCGCTACACAGCATTAGAAACAAACCCTGTTCCTGTGAATCTTAAGG
GTGTCACAAGCGACAGCAGCTTAACTGTACCCCTGCATCCTAAAAATCCAGATGTTGGTA
CCAAAACTATATGGGTGGCTCCCAGGTTACTAATAGACCAGGCTGATGCGAAGACCTTGA
AAGAAGGAGAAAACGCCACGTTTATTAACTATGGCAATGTTACCATCGATAAGATTCACA
GATCAAAGGATGGTACAGTAACAAGTATAGATGGAACACCGAATCTCGATAATAAAGACT
ACAAAAAGACCGTCAAGTTGACTTGGCTCGCTGAGAGCAAACAATCACCAATGGTAGAGA
CCTATTGTGTTTACTTCGATCATATCATATCTAAAGCAGTGCTGGGCAAAGATGAGGACT
TCAAGCAGTATATCGGCCATCAGACTAGGTGGGAAATTCCGATGGTCGGCGAGCCGGAGC
TGGCCAACGCGAAGGTTGGGGACATAGTGCAGCTGCAGCGGCGCGGGTTCTTCCGCGTGG
ACGTGGCCAGCGCGCCCCCCTCCCCGCACACCAGCCGCCCCGCCCCGCTGCTGCTGTTCC
ACGTTCCCGACGGACACACTAAAGAAATGCCCGGACAGCCGAAACCAGCTCAGAGCGTTC
AAGCGAGCAAGCCGGTGGCCGCGGCGCTGACTCCAACCTCGTCAGATTTGAACGACCAGA
TCACAAAACAGGGAGATCTGGTGAGATCTCTCAAAGCTGCTAAAGCCGAAAAGACAAAAG
TTGACGAAGCTGTCAAAGTGCTTTTAGAATTAAAGGCTAAATATAAAACGGCCACGGGAC
AAGACTGGAAGCCAGGTACCGCAGCACCAGCACCAGCACATTCCGCATCTCCCTCCGGTG
ACGCAGCGTCGCTAGACCAGCAGATCACGAAGCAAGGCGACTTAGTTCGTTCCCTGAAAA
CGTCTAAGGCCGAAAAATCGAAAATTGACGCGGCTGTCAAGGCATTGCTGGAACTCAAAG
CCAAATACAAGGCTGCCACCGGACAAGATTGGAAGCCAGGATCCGCGCCTGCAGCAATGG
CCACCCCCGCACCGTCCAATGACGTCACCGCTCTCGATCGTGACGTCACCGCGCAGGGAG
ACTTGGTGCGCTCGTTGAAAGCGTCTAAAGCCGACAAGGCCAAGATCGACGAGGCCGTCA
AGCAACTCCTGGACTTGAAAGCGAAGTACAAGGCTGCCGCTGGACAAGACTGGAAACCGG
GAGCGAAACCAGCGCCGCCGCAGCAAGCTGCTCCGCCGGCGGCCGATCCGAACGTAGCGG
AACTCGCGTCGCAAATCGAAGCCCAAGGTGACAAAGTTCGGAGGATCAAAAGCGAAAAAG
CCGATAAATCAGTCGTCGACGTCGAGGTCAAAAATCTGTTGAACCTCAAAGCTCAATACA
AAGCAATGACTGGAAGCGACTGGACACCGAAACCTAATCAAGCGAAAAGCAATCAGGCGA
GCGCTAAACCGACCCCGGCTGCTAAGGTACCGAAGACGCAACCACCTAAACCTGTAAAGG
AGGAATCTTCAAGCGGAGTCAAGAAGGTCACGAGACTAGGGCTGGAGGCCAGCAAGGAGA
CCGATCTATCCGAATGGTATTCGCAAGTCATCACGAAATCGGAAATGATCGACTACTACG
ACATATCTGGTTGCTACATACTGCGGCCGTGGTCGTTCAGTATATGGGACACGATAAGGC
ACTTCCTCAGTGCCGAATTCCGGAAGCTCGGAGTCAAAGACGGATATTTTCCTATATTCG
TATCGAAGGCGGCGCTAGAGCGAGAGAAGACGCACATAGCTGACTTCGCGCCGGAAGTGG
CGTGGGTGACGCACTCGGGCTCGTCCGAGCTCGCCGAGCCCATCGCCGTGCGCCCCACCT
CCGAGACCGTCATGTACCCCGCCTACGCCAAGTGGATCCAGAGCCACAGGGACCTGCCGC
TCAAACTCAACCAGTGGAACAACGTCGTTAGATGGGAGTTCAAGCAACCGCAACCTTTCC
TGAGGACGCGCGAGTTCCTCTGGCAGGAAGGACACACCGCTTTCCGGACCAAAGAGGAGG
CGGCCGAAGAGGTCTTAATTATATTAGATTTATATGCTCGCGTATACGAAGAGTTGCTAG
CGATACCGGTGATCAAAGGTCGTAAAACAGAGAAGGAGAAGTTTGCTGGCGGCGACTACA
CCACCACGGTCGAAGCCTACGTACCGGCCAGCGGCAGAGGCGTTCAGGGAGCGACGAGTC
ATCACCTAGGTCAAAACTTTTCGAAGATGTTCGAGATTGTATACGACGATGCCGAAACTC
TGGAGAAGAATTACGTCTATCAGAATTCGTGGGGCATCACAACTAGAACTATTGGTGTAA
TGGTGTTGGTTCACGGAGACGACAAGGGCCTAGTGCTGCCCCCTCGCGTCGCCGAGATAC
AGGCCGTGGTGGTTCCGTGCGGCATCACGGCGTCCAGCTCGGCGGACGAGCGCCAGGCGC
TGATGGACTCCTGCAAGGCGCTAGTCAACGACCTGCTCGCCGCCGGAGTGAGGGCCGAAG
GCGACTACAGGGATAACTATTCGCCTGGCTGGAAATTTAACCACTGGGAGTTGAAGGGGG
TTCCAGTAAGAGTTGAATTAGGTCCCAAGGATATAGCAAAGGGTACAGTTGTAGCAGTAC
AGCGTCTCACCGGTGATAAGATGGTCTTCAAACGTGATTCTGTTGCAAAAGACATTGTTG
AACTCCTTGATAAAACACACGCGCAAATGTTTGAAAGGGCAACGAAAGATCGAGATGCTC
GGTTATCATCTGTTACTAAATGGGAAGATTTCACAGCTGCTCTTGAAGAAAAAAACATTT
TACTTGCACCATTTTGTGGAGAGATATCGTGTGAAGATAACATTAAGAACGACAGTGCAA
GGACAGAAGACGACCCTAACGTTGATGTCAAGGCACCAGCCATGGGTGCGAAATCACTGT
GCATACCATTTGAACCTCCAAGACAATTATCTGAATCTGACCGCTGCATACACCCGGCTT
GTAAAAATAAGCCCAAGTTCATTACATTATTTGGAAGAAGTTACTGAATATAACAGTGGC
ATTTATGAATCATTGTTTTTAAGTAAAGCGTTTCACAAAAAAGATAAAATATAATTTATT
TCAATATGAAAAAAAAAAAAA
(4821 bp)

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