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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoASG_c28563_g1_i2
Scaffold_idBomo_Chr16
NCBI non-redundant
(nr)		N-glycosylase/DNA_lyase_[Bombyx_mori]
Ontology
GO:0003684 F damaged DNA binding
GO:0003824 F catalytic activity
GO:0003906 F DNA-(apurinic or apyrimidinic site) endonuclease activity
GO:0004518 F nuclease activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006281 P DNA repair
GO:0006284 P base-excision repair
GO:0006289 P nucleotide-excision repair
GO:0006974 P cellular response to DNA damage stimulus
GO:0008152 P metabolic process
GO:0008534 F oxidized purine nucleobase lesion DNA N-glycosylase activity
GO:0016787 F hydrolase activity
GO:0016798 F hydrolase activity, acting on glycosyl bonds
GO:0016829 F lyase activity
GO:0019104 F DNA N-glycosylase activity
GO:0034599 P cellular response to oxidative stress
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
Transcript
Level		FPKM:3.78 TPM:2.90
ORF EntryO_BomoASG14234_3prime_partial:A_BomoASG_c28563_g1_i2
Sequence
(Nucleotide)
AAAAAAAAAAAAAATAAACAATAAATAAACAACGAAATTAAATTCTAAAAACCAAAAGAA
TAAAAGAGAAATAGTCATATCACAGACACTAAAACAATTTAAATGTCTTGGAAGAAATTA
AATTGTCAACCACATGATTTACAGTTATTGGCTACGCTTTCGGGTGGTCAAAGTTTCAGA
TGGACCCACAACACAGAAACAGATGAATGGACAGGCATATTCTCAAAAACAATTTGGAAA
CTCAAACAGGGTGACAACTGTTTGTTATACCAAGTACTGGGTAGTTTATTGAACTTTCCA
GAAAACAATGGCAGTAATAACAAAAAAACAAATTTCAAAAAGTTGTTAGAAAATTACCTG
AGGTTAGATTATGATCTCAAAGAATTATATAAAGACTGGTCTAATAAAGATGAGCTATTC
AAATCAGCTGGCCAACAGTTCTACGGAGTAAGGATGCTTAGACAAGAACCTGTTGAAAAT
CTTTTCTCATTTATTTGTAGCCAAAATAATCATATTTCAAGGATATCGAGTATGGTGGAA
AAGCTGTGCACAAATTATGGTGAAGAAATCTGTTGAAACACAACTAAGAAACCTAGGGTT
TGGATACAGAGCGAAATTCATACAAAAATCAGCATCACAAATAGTTGAATGGGGTGGTGC
GAAATGGTTTGATGGTCTTCAAAACATGAAGTACAAAGATGCTAAATGTGAACTCATGAA
ATTACACGGAATCGGACCTAAAGTCGCGGACTGCATTTGTCTTATGTCACTAAATCATCT
CGAAGCACTGCCAGTGGACACGCATGTTTATCAGATAGCAGCCCAGAACTATTTACCACA
TTTACGAGGAAAGAAGAATGTAACAGAAAAGATGTACACAGAGATCGGAGATCATTTTAG
AACGCTCTATGGTGATATGGCTGGGTGGGCTCACACTATTTTATTCTGCT
(950 bp)

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