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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoASG_c28537_g1_i2
Scaffold_idBomo_Chr1
NCBI non-redundant
(nr)		otoferlin-like_isoform_X2_[Bombyx_mori]
Ontology
GO:0003674 F molecular_function
GO:0005509 F calcium ion binding
GO:0005737 C cytoplasm
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0007605 P sensory perception of sound
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016079 P synaptic vesicle exocytosis
GO:0016323 C basolateral plasma membrane
GO:0030054 C cell junction
GO:0030672 C synaptic vesicle membrane
GO:0031410 C cytoplasmic vesicle
GO:0032403 F protein-containing complex binding
GO:0045177 C apical part of cell
GO:0045178 C basal part of cell
GO:0045202 C synapse
GO:0061025 P membrane fusion
GO:0090102 P cochlea development
Transcript
Level		FPKM:2.81 TPM:2.16
ORF EntryO_BomoASG14172_3prime_partial:A_BomoASG_c28537_g1_i2
Sequence
(Nucleotide)
CCGATCACGAGATGGACAAGAATCTGATAATAAAACTTGACAATTTTAAATTGATCTACG
TATAGTTAATGGCTCCATAGTTGGGATGGACGTATGTACACAGTTTAAAAACAAAGGTGC
TTCAATCGCGAAACATTTTGCGCGCCAACAAGCTTTTGGGTAGCTTCAAGCTGGACGTAG
CCACGGTGTGGAGCCAGACAGACCGCCAGTTCTATCACAAATGGGCCTTGCTGACTGACC
CTGATGATGTAGCCGCCGGGGCTAAGGGCTACCTGAAGTGCGACATTAGTATAATTGGTA
AAGGCGACACGATCAAGATCCCACCGAAGAGCGAAAAAGACGAGGATGACATCGAAGCCA
ATTTGCTGCTACCCGACGGCGTGCCAATTGAGCGTCAACGAGCTAAGTTTATCGTCAAAG
TGTACAAGGCCGAAGGACTTCCGAAGATGAACTACTCTATAATATCGAATGTGAAACGAG
CCTTCACTGGAGAGAGCACGGAATTAGTCGATCCGTACGTCCAAGTCAGCTTCGCTGGAA
TGACAGGGAGCACATCAGTTAAGAAGAACTGCTACGCTCCAGTGTGGAACGAGCAGATAA
TATTTACGGAGATGTTCCCACCGCTCTGTCAACGTATCAAGGTCCAGCTTCGGGATAATG
CTCCGGTCCATCCTAACATTATCGGCACGCACTTCATTGACCTCAAGACAATCTCCAATG
ACGGAGAACGCGGGTTTTTGCCAACGTTTGGTCCAGCCTACGTATACATGTACGGCTCAA
CTCGAGACTACAGTATTATTGACCAGCACGCGAACCTTAACATGGGAATGGGTGAAGGCG
TTGCCTACCGCGCCAGGATTCTTCTCTCCATCCGCACGGAGATCGCGGAGAGCATTGAAT
GTCCAACAACTGAGGTCGAAATAGAATCTATTCCACCAGTCATTGAGTCCAGTTTCGAAA
AGAACGCGGAGTTCTTCTTGTTTTCGACAATTTTCGACGCCAACATGATCGATAAGCGTC
TGGTGGATAAGGCATTGCAGTTTGAACTGAGCATCGGTAATTCTGGGAACAGCCTGGATG
GTCACAACGAATCTGTACGGCGCCCACAGGATGTAGACCTCGAAGAGAACGAGGACATTA
GTGTGGACACCGGATATTGGCAAAGCTTAACGCATCCCACAAAAGCAACATCGACTGACA
AGACTTATTATTATATTCCGTATTGGGATCACAAGCAATGCATGCACGTTCGCAGTATTT
GGCCTGACCATCGCCGCAGAATGTACAACTCCAACTTGATCGCCAATATTGTCGAAAAAT
TCGAGGAGGGGCTGAATGATGCCCAAGCGACAATTGAATCGGAAGTTAATCCAGGCAGCA
ACAGTATTCTGGCTTTGAAATCTGCTCTTGAAACAGTCAGCAGTGCCTGCGCTGCTTATG
TACGCCACATGACCAACGCCCCACCAATCGGAAATACTAAGCTTGATCGTGAACGACAGA
AAATGTGCTTATATGAAATTGGTCACCTAAGTAGCCTTACTAAGGGACTGAGGGCTTTAA
TCACAAAGCATTCGATTAAAGATCGCTTGCGTACTGCTCATGCTTATCTAAATAAGTTAA
AATCTTTGTGCGAGGATGCACAGCATGCAATG
(1652 bp)

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