SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoASG_c28528_g1_i2
Scaffold_idBomo_Chr6
NCBI non-redundant
(nr)		non-structural_maintenance_of_chromosomes_element_1_homolog_isoform_X1_[Bombyx_mori]
Ontology
GO:0000724 P double-strand break repair via homologous recombination
GO:0000781 C chromosome, telomeric region
GO:0004842 F ubiquitin-protein transferase activity
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0006281 P DNA repair
GO:0006301 P postreplication repair
GO:0006310 P DNA recombination
GO:0006974 P cellular response to DNA damage stimulus
GO:0008270 F zinc ion binding
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0030915 C Smc5-Smc6 complex
GO:0035556 P intracellular signal transduction
GO:0046872 F metal ion binding
GO:2001022 P positive regulation of response to DNA damage stimulus
Transcript
Level		FPKM:7.03 TPM:5.39
ORF EntryO_BomoASG14163_complete:A_BomoASG_c28528_g1_i2
Sequence
(Nucleotide)
ACAACGTTAAAATCATAGTGTCAAATTGTCAAACAAAATATTAATTTAGGACGTTCAAAA
TTTAAACCGCTTCGAAACTTTATAAATAAACACAAACTAAAAATTTTTAACCAGCCATGT
CTTACAGTAAAGTTCACAGATATTTTTTAAGAACTATAGCCAGTAGCGGTGTTATGAGTG
TTGATGAAGCTCATCGAGTCCTGACTAAATTTACAGGTGAGCCGATCTTGTTAAAGAACT
GCATTCAAGAAATTAATGATGTTATCAGACCATATCAGCAGTCAATCAAAGTAACATACA
ATGAAAGTACAAATGAAGAAGTAGTTATATTCTTAACCCATGCTTGGGATTCAATATCTG
AATCCCAAAAGATCTTCACAGCTAAGGAATTAGACTATTTCAGATTATTAATTGAAGAAA
TAATGAGTATAGATGTAAGAGAAATCACAGGCATTCATGCAATTAATTTGGTTAATAAAA
TGGGCCAGAAAATATCAATGCTCCAAGCTGAAAATTTATTGGCTAAATGGTGTAAAATGT
ACTACTTAGAGAAGATACAAAATAAATACCGCTTAGGTGTGAGAACCATAAATGAATTTG
AAGATTATTTTGAGAAATACATGCCTGATGTAATGAAAGATTGTTACATTTGTAAGAAAA
ATGTTTTTTGGGGGGCTAACTGCATAGCATGTGAAAAAGCTATTCACACTAGGTGCCTTA
ATCAGTACTTAGAAAAAATAAAAAAATGGCCTTGTTGTAAACTCGACTTCAGTCCAGATC
AACTGAAACAACTTAACGAAAGCCAGAGAATGACTCAGATAACTCAAACCTTTGAAGACA
CACAGTCAATTGAAGAAAGGTCGGAGAATTCAACAGCTTCCAATGTAGAAAATGATAATA
CAGAAGAAATGGAAAGAAGTCAAAATACAGATAACATACGACGTCTCTCTAGAAAGAGGA
AGAGAGAATAAATTTATGGTACAAAATGTATTTTTATGTAGTTGTAGTTTTGAGTTTTGT
ATGTGGAAACTTAGAACAAATATATATTTTTAATTTGCCCTTATGTATGTATTTACAAGC
AACGTTATTTGGCTGGCATAAATAGTACGTAGTTCTTTAATACAAAATGTAGCTACGCAA
TTGATCTACACGAG
(1154 bp)

- SilkBase 1999-2023 -