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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoASG_c28442_g1_i2
Scaffold_idBomo_Chr2
NCBI non-redundant
(nr)		LIM_and_SH3_domain_protein_Lasp_[Bombyx_mori]
Ontology
GO:0003779 F actin binding
GO:0005515 F protein binding
GO:0005829 C cytosol
GO:0005925 C focal adhesion
GO:0007279 P pole cell formation
GO:0007283 P spermatogenesis
GO:0007291 P sperm individualization
GO:0008270 F zinc ion binding
GO:0014881 P regulation of myofibril size
GO:0015629 C actin cytoskeleton
GO:0030018 C Z disc
GO:0031672 C A band
GO:0045214 P sarcomere organization
GO:0045856 P positive regulation of pole plasm oskar mRNA localization
GO:0046872 F metal ion binding
GO:0070864 C sperm individualization complex
GO:0071689 P muscle thin filament assembly
Transcript
Level		FPKM:29.98 TPM:22.99
ORF EntryO_BomoASG13947_complete:A_BomoASG_c28442_g1_i2
Sequence
(Nucleotide)
CGCCAACGGTCGCCATTTGTCATATTTTTGGCATGCGCGTACGGGGATGCTACGAAAATC
GTGCTCCGGAGTGTTTCCTTAAAAAAGTTATATCTAAAGTTTGTTCGTGAATCGTGATTA
CTTGTGTTGCTCTGTGAAAGTGTAGTGCTTTTATTTTATTTAAGTGCTATTGGCTTAAAA
CCGTTCAAGATGAATAAAACTTGTGCGAGGTGCGAGAAAACAGTTTATCCTACCGAGGAA
TTGAAATGTTTGGACAAGGTTTGGCACAAGGGCTGCTTCAAATGCCAAGAGTGCAGTATG
ACCTTGAACATGAGAACGTACAAGGGCTACGGGAAGCTGCCTTATTGTGAAGCTCACGTA
CCGAAAGCGAAACCGACGACAATGGCCGAAACACCTGAACTGAAACGGATCGCCGAAAAC
ACGAAACTACAGAGCAACGTGAAGTACCACGCCGACTTCGAGAGGAGTAAAGGGAAATTC
ACACAGGTGGCAGACGATCCTGAGACCCTAAGGATCAAAGCGAACACGAAGATCATAAGT
AACGTGGCTTACCACGGCGATCTCGAGAAGAAAGCCCAGATGGAGAGGCAGAGGCAGATC
AACGAAAACGGAGAAATAGTGGATGTGCCGCCGCCGGATAATTACCATCAGCAGATAGAC
AATTACGCGAACGAAATGCTACAGCCTAACGTGCCCCCCCCGAACCTACCCCCCAAAAAC
CACTATCAGATCCCGACCACCCAACACCAGACCCATTCCGGGCATAGCCAACAACACTAC
ACCCAACCTCTACCCAATCACAACCAGAATCTATCGAACAACCAAAGTATGTCGCAGCAC
GGACAGAGTCTGCCCCATTACCCCCAAAACCCCCACGCTCAGAACGTTTCCCATCACACC
CAAAACGTACCCCAACACGCTCAAAATGCACCCCAGCACAGCCAAACCCTACCCCAACAC
AGCCAACCAGTTTCCCATTATCAGCAAACTCACAATTCCACAATCCCGCAAAATCGTTAC
CCAGAACAATACTATCAGCCCAAAGAGGATATCGGATACCAATACCAAGATTACCAGGGT
CAATATTATGGGCAATACGCCCAGAATTACGGATCCTCTGGTCAGCCCAAGATCGGTAGG
ATTCAGGATTACGATCCGTTGAGCGACGGGCCTAGGGCTCCTCCGAATACGCAAAGGGCC
TCCGCCACCGTCATCTATAACAGCACAAACGATGGAAAGCAAAGAGGTAGCAGTCATCAA
ACACAACATCAGCAGTCAAGGCAGATCGGTCGCGTAACCGATCTGGATCCGTTGGCCAAT
GAAGTTCAGAGACCGGCTAGCTCACAGAATCCGCAAGTGTACATAGCAATGTATGATTAC
GAAGCCAACGACAGTGATGAGGTGTCGTTCCGTGAAGGCGACCTCATAATGAATGTAAGT
GCTATAGACGAGGGCTGGATGATGGGTCAGGTGGTACGCACCGGCATGGCGGGCATGCTG
CCAGCCAACTACGTCGAGACCGCACCGGCGTCTGCATTACGGCAATACAATTGAATTAGG
ACGATCCACTCACTGATAAAAACACTTCAAAAAATATTCATTACCAATTGATTTAGATTT
TGCATGTTTTTCATCTTTTTTAATCTTTAAGAATAATTAAAAAAAAATGCCGGCCTTATG
AGAACTATTATTTATAATTGGTACTTGTAACTATGTTTGTTTATTGAAAATAATAATAAA
TACTTCGTCCGGAGTCTAAACAGTTACATCAGTTACAGCATTAATATTATTAAAAAAAAA
TCTAGATTTGCACTTAAAATATAATATAAAGAATTTTCCGGGCAACCCTTTTGGTAGATG
GATCCTAAATGCATTTTAACCAGCTATTGTTTAAAGTTTACTTAATACCAAAATAAAAGT
GTACACATAACTTAACAAACAGTAAAAAGAAATGTTTTTACATGTTTTATTGGTAATTAA
TATCTTTTTGAGTGTTTATATTGACATATGATTATTGAAACAAGAAAAAGTAACTCATAA
TTTATATAAATTAACATCTCTTATCAATTAATTGTAATGGATCTTATGGTTTAATCGTTG
GCCAATTAAAAAAAATCATTACAGAAATAACCCATAAAATTTCTTTCAATTATTTACTGG
AAGCAAACTTTTCTGTACATTGTTTTCTTTGAGTGTTGCCACGTTTAATGTCCAGACCGA
CAGCGGTGCTGTGTTGCCATTTCTAAAAATATAGTATGCGAAAGGGCTGTGTGACTTGTT
GATTCGATTAAACATATCATAAGCTTCCAAGTATTGTTTTAGATTCTTGGTTTCGGCCTA
ATTGGACTTTACAATTGATGACACACGCATATCATATCACATATTTGTCAGAAAATGTAG
CCGCATCCATCACTCATAGTTCGTGAATACTTAAATTTTATTTTGAAATATGTATGTATA
TTTTTTGTTAACATTAAGTTACTTTGATTAGCAAGCCAAGGTAATCCTCAATGTCTCTCA
GGATTACTCACGTGTTTGTTCAAGAAGACTTAATTAAAACTTGCATAGATCGGAAGAGCG
TCGTGT
(2586 bp)

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