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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoASG_c28442_g1_i1
Scaffold_idBomo_Chr2
NCBI non-redundant
(nr)		PREDICTED:_LIM_and_SH3_domain_protein_Lasp_isoform_X4_[Papilio_polytes]
Ontology
GO:0003779 F actin binding
GO:0005515 F protein binding
GO:0005829 C cytosol
GO:0005925 C focal adhesion
GO:0007279 P pole cell formation
GO:0007283 P spermatogenesis
GO:0007291 P sperm individualization
GO:0008270 F zinc ion binding
GO:0014881 P regulation of myofibril size
GO:0015629 C actin cytoskeleton
GO:0030018 C Z disc
GO:0031672 C A band
GO:0045214 P sarcomere organization
GO:0045856 P positive regulation of pole plasm oskar mRNA localization
GO:0046872 F metal ion binding
GO:0070864 C sperm individualization complex
GO:0071689 P muscle thin filament assembly
Transcript
Level		FPKM:16.98 TPM:13.02
ORF EntryO_BomoASG13945_complete:A_BomoASG_c28442_g1_i1
Sequence
(Nucleotide)
CGCCAACGGTCGCCATTTGTCATATTTTTGGCATGCGCGTACGGGGATGCTACGAAAATC
GTGCTCCGGAGTGTTTCCTTAAAAAAGTTATATCTAAAGTTTGTTCGTGAATCGTGATTA
CTTGTGTTGCTCTGTGAAAGTGTAGTGCTTTTATTTTATTTAAGTGCTATTGGCTTAAAA
CCGTTCAAGATGAATAAAACTTGTGCGAGGTGCGAGAAAACAGTTTATCCTACCGAGGAA
TTGAAATGTTTGGACAAGGTTTGGCACAAGGGCTGCTTCAAATGCCAAGAGTGCAGTATG
ACCTTGAACATGAGAACGTACAAGGGCTACGGGAAGCTGCCTTATTGTGAAGCTCACGTA
CCGAAAGCGAAACCGACGACAATGGCCGAAACACCTGAACTGAAACGGATCGCCGAAAAC
ACGAAACTACAGAGCAACGTGAAGTACCACGCCGACTTCGAGAGGAGTAAAGGGAAATTC
ACACAGGTGGCAGACGATCCTGAGACCCTAAGGATCAAAGCGAACACGAAGATCATAAGT
AACGTGGCTTACCACGGCGATCTCGAGAAGAAAGCCCAGATGGAGAGGCAGAGGCAGATC
AACGAAAACGGAGAAATAGTGGGTAGCAGTCATCAAACACAACATCAGCAGTCAAGGCAG
ATCGGTCGCGTAACCGATCTGGATCCGTTGGCCAATGAAGTTCAGAGACCGGCTAGCTCA
CAGAATCCGCAAGTGTACATAGCAATGTATGATTACGAAGCCAACGACAGTGATGAGGTG
TCGTTCCGTGAAGGCGACCTCATAATGAATGTAAGTGCTATAGACGAGGGCTGGATGATG
GGTCAGGTGGTACGCACCGGCATGGCGGGCATGCTGCCAGCCAACTACGTCGAGACCGCA
CCGGCGTCTGCATTACGGCAATACAATTGAATTAGGACGATCCACTCACTGATAAAAACA
CTTCAAAAAATATTCATTACCAATTGATTTAGATTTTGCATGTTTTTCATCTTTTTTAAT
CTTTAAGAATAATTAAAAAAAAATGCCGGCCTTATGAGAACTATTATTTATAATTGGTAC
TTGTAACTATGTTTGTTTATTGAAAATAATAATAAATACTTCGTCCGGAGTCTAAACAGT
TACATCAGTTACAGCATTAATATTATTAAAAAAAAATCTAGATTTGCACTTAAAATATAA
TATAAAGAATTTTCCGGGCAACCCTTTTGGTAGATGGATCCTAAATGCATTTTAACCAGC
TATTGTTTAAAGTTTACTTAATACCAAAATAAAAGTGTACACATAACTTAACAAACAGTA
AAAAGAAATGTTTTTACATGTTTTATTGGTAATTAATATCTTTTTGAGTGTTTATATTGA
CATATGATTATTGAAACAAGAAAAAGTAACTCATAATTTATATAAATTAACATCTCTTAT
CAATTAATTGTAATGGATCTTATGGTTTAATCGTTGGCCAATTAAAAAAAATCATTACAG
AAATAACCCATAAAATTTCTTTCAATTATTTACTGGAAGCAAACTTTTCTGTACATTGTT
TTCTTTGAGTGTTGCCACGTTTAATGTCCAGACCGACAGCGGTGCTGTGTTGCCATTTCT
AAAAATATAGTATGCGAAAGGGCTGTGTGACTTGTTGATTCGATTAAACATATCATAAGC
TTCCAAGTATTGTTTTAGATTCTTGGTTTCGGCCTAATTGGACTTTACAATTGATGACAC
ACGCATATCATATCACATATTTGTCAGAAAATGTAGCCGCATCCATCACTCATAGTTCGT
GAATACTTAAATTTTATTTTGAAATATGTATGTATATTTTTTGTTAACATTAAGTTACTT
TGATTAGCAAGCCAAGGTAATCCTCAATGTCTCTCAGGATTACTCACGTGTTTGTTCAAG
AAGACTTAATTAAAACTTGCATAGATCGGAAGAGCGTCGTGT
(1962 bp)

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