SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoASG_c28419_g1_i4
Scaffold_idBomo_Chr13
NCBI non-redundant
(nr)		organic_cation_transporter_protein-like_isoform_X1_[Bombyx_mori]
Ontology
GO:0000166 F nucleotide binding
GO:0005215 F transporter activity
GO:0005524 F ATP binding
GO:0005777 C peroxisome
GO:0005778 C peroxisomal membrane
GO:0005887 C integral component of plasma membrane
GO:0006810 P transport
GO:0006811 P ion transport
GO:0009437 P carnitine metabolic process
GO:0015226 F carnitine transmembrane transporter activity
GO:0015491 F cation:cation antiporter activity
GO:0015879 P carnitine transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0022857 F transmembrane transporter activity
GO:0031231 C intrinsic component of peroxisomal membrane
GO:0055085 P transmembrane transport
GO:0098655 P cation transmembrane transport
GO:1902603 P carnitine transmembrane transport
Transcript
Level		FPKM:3.67 TPM:2.82
ORF EntryO_BomoASG13868_5prime_partial:A_BomoASG_c28419_g1_i4
Sequence
(Nucleotide)
TTGTACGTATAGTGCAGTGCTAATAATGGTTGTGAAAGAAAATATCGATTTAGAACACGT
TTTATCGAAATTTAGTTTGAAGAGAATGTTTTACGTGAAGTTTTTGAGTTTGTTGTTATT
TTCCGGTGTGACGAATTCATTTTACAATGTCAACTATGTTTTTGCAGCCGCTGATGTTCG
TTATAGGTGCAAGTACCCGGAGTGTGATAATAAGAATAGTGAAGTCTTAAATTTTACCTT
CGACAATGGAAAATGCACAAAATATGCACTATTAAATAAAGCTGAATACTGTTCAGTAGA
AAATATAGATCTTTCTCGAGGGACTAGCTGCAAAGAATGGGTTTACGAGGAAAAAGGCAG
TTTTGTTGAAGAGTTAGGAACAGCCTGCGAAGATTGGAAGCGGACTTTGGTTGGAACAGT
GCACAGCTTCGGGTATATGATCGGTCTGCTCATCGTGGGGCCATTGGCCGATAAGTGCAG
GTATGAGTGTGAAAGGAATCATAGCTTAGTGGGCTCAGCACTAAACCTAAGTTTAAAGGC
AGGAAAATGCTACAAATATTCACTCATAGACGAGAACGGAGACTGCTCTGTGGATAATTT
TAACGTCTCAAATGTTGAAGCCTGCAAGGAATGGGCGTATGATGAACCGGAGAGCTTCGT
TGCTGAATTCCAGTTGGGATGTCAAGAGTGGAAGAGGACTTTGGTCGGAACAGTGCACAG
TTTCGGCTATATGCTAGGTCTGTTGTTATTGGGACCGATATCTGACAAGGTAGGAAGAAA
GAAATTGCTGGTATTCACTGGCATCGTTGGAGGGATTTTGGGCTTTTCAAGAAGCATCAT
TAGCTACTATTGGGCTTATATCGCTTTAGAATTATTAGAAGCTTTACTCGGAGATTCTTA
TTCACCAAATTATATGTTAGGTGTGGAGATGGTGGCGAAACAGAATCGAGTATTTTTCGG
TCCACTCATGATCGGGAGCATGTCTGTAGCTGGCATATTATTATCTCTAGTCGCTTGGCT
TTTACCAAACTGGAGATTGTTTTTGAGAGTTATCTATTCACCTGCCCTTATATTCATACT
ATACGGATTCTTCTTAGACGAAAGCGTTAGGTGGTTATTAATCAAAGGTAAGAAGGAAGA
AGCGAAGAAAATTCTTAGGAAAGCTGCTGAGATCAGTAACCTGTATCTAGATGAAGAGAC
TCTTGATAGTATCGAAAGCGAAAAGAGCACAGATTGCACCAGTTTCATTAAATTGCTCAA
GATGACCATAATGTCTCGGAAGCTGCTCCTTAGGTTCCTGGCGTGTCTCTGTATGTGGAT
CACATCTACGTTCAACAAATACGCTTTATTGATAAACTCTGTGTCTCTAGAAGGAAATAA
ATATGTTAATTACGCTCTGATTGCATTCGCCGACCTCCCGGCCAGTATAACGTTAATATT
TATTCTCATTAAATTCAAGAGGAAAGGATCGCTTATGTTCTCCTTTTTCCTGACGGGGCT
GTTCTGTGTTATTCAATCACTTGTACCAAAAGGTTACTCAACTTTATCCCTATCGCTGTT
CTTCATGGGGAAGCTTGCCTCAGCTCAGTCTTACGCTACTGTATACTTGTATACGTCCGA
GCTATTCCCTACGTATACTAGGAACACAATGCACGCTGTCTGCTCGTCAGTGGGTAGAAT
CGGATCGATTCTTGCACCACAAACACCGTTATTGAGGCAGTTTTGGCCGGGTCTACCTTC
AGTCATCATAGGTAGTTTGTCAGTGATCACGGGTATGATAGTTATGATGATGCCCGATAC
TGCTGAGGATGTACTGCCAGATACCATCAAGGAAGCAGAAGCTTTGGGTATGAAGACAGT
TAAGGACAAGAAAGCTGTAGTTAAATTGTTGAAATAAATTTTATTTTGTTTTTCGAAAAA
AAAAAAG
(1927 bp)

- SilkBase 1999-2023 -