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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoASG_c28347_g1_i3
Scaffold_idBomo_Chr25
NCBI non-redundant
(nr)		protein_sel-1_homolog_2_isoform_X1_[Bombyx_mori]
Ontology
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0007219 P Notch signaling pathway
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030970 P retrograde protein transport, ER to cytosol
GO:0034976 P response to endoplasmic reticulum stress
GO:0036503 P ERAD pathway
GO:0036513 C Derlin-1 retrotranslocation complex
Transcript
Level		FPKM:7.83 TPM:6.00
ORF EntryO_BomoASG13733_complete:A_BomoASG_c28347_g1_i3
Sequence
(Nucleotide)
CTACATTTGACGTTGATAGAAATCAGTCCTTTAAATTTATTTTAGAGAAGAGTTGAGAAT
ATAGACTTGCATGTAAATTATTGATAAATTAATTGGCCTTTTACTTTAAATATACACGTG
TAAATCTATAAGTGGTCACGGAAACATTCCTTTTATTCGCCGGTTAACGTTAAAACAAAA
CATAAACAAGTGCTTGGGACACGTAAGTGCTGTGAGTGTTGTTATTATTTATTCGAACCG
AAAATATGGACCGCTACAAACTATTAGTGCTTGTTCTGTGTTTTTCGTTGACGACTACCG
ATCCCGTTGGACCCGAATCACGAAAGGACTCCGAGAAAAACGAAGAAGATGATGTCTCGA
GTGAAGTTGAAGAAACGAAAGGGAAACCCGATTCAGAGTACATCAAAGAACTGACTGATG
CTATGAATAAAGAGATACTGACGTTACAGGAGTATGCTGATGCTATGAAGAGTCAGTCGT
CAAAAGATGAAACCAATAAAGAATCACACTTAGAACAAATGGCATATACTTTAAAGCTTT
TACAGAAAAGTCTTAAGAAGCACTCTGAACCAACTTGGCTTCCTAACCAAAAAGCAGAAC
TGTCTGTAAATGAGAAATCACTAGAGGAGAATCCACAGGATATTCTGAACAGTCTACCAC
CATTACCAGAAGAGACAGAACCAGAATTAACTCCCGAATTAAAAGAAGCCAAAGAATTGT
ATGATGCTGCAGTAGCAAAACTAGATCGTCGAACTTTGGATGTCGATGCTTCCATCCTTC
AGATCAAGCAGGCAGCCGAAGTCGGATATGTGCCGGCTAAGATCAAGCTAGCCTGGTCAT
ATCTCTATGGGGAGGGGGTCGAAATAGATTTCGAAAAAGCTAAGAGCATATTTGAAGAGT
TGGCAGCCGAAGGGAATGCTGATGCCCATGCGGGCATGGGCTTCTTATACGCAACAGGCA
TCGGAGTTCCAGTGTCGCAGGCAAAAGCCGTGGTGCATTACACTATTGGTGCGATAGGTG
ATAGCTCGTACGCACAGATGGCGCTGGCGTATCGATACTGGAGCGGTCACACGGTGCAGA
GCTCATGTCCGAAAGCAATGGATCTATACATGAAGGTGGCTGCCAAAGTGGCAAGTAAAA
TGACATTGAACGGAGGCCCGGCCATACATCGCACGCGGCTCATCGACGAGGTGGAGGGCG
GCGGCGGAGCCCTAGACACGGATCTCATCGAGTACTACCAGCTCCTCGCCGAGAAGGGTG
ATGTACAAGCACAGGTGGGTCTGGGGCAGTTACACTTCCAAGGAGGTCGCGGCGTGACCC
TGGACATCAACAAAGCGTATCACTACTTCCAACAGGCGGCCAAGACGGGAAATGCTGTGG
CGCACGCTTTCCTTGGAAAGATTTATTTAGAAGGCGGAGACGGCATAGTGGCAGACAACG
ACACGGCATTCAAGTACTTCAAGAAGGCGGCTGAACTGAACAACCCTGTGGGCCAAAGCG
GACTAGGGTTGATGTATTTACAGGGCCGCGGCGTTCCCAAGGACACGACGGCCGCGTTCA
AGTACTTCACGATGGCCGCCAACCAGGGCTGGGTCGAGGGGCAGTTCCATCTGGGCTTCA
TGTACTTCGGGGGCATCGGCGTGCGGCGCGACTTCAAGCAGGCCAACAAGTACTTCTCGC
ACGCGTCGCAGTCCGGCCACGTGCTGGCGCTGCACCAGCTCGCGCTCATGCACGCTCACG
GGCTCGGCGTGCTCAAGTCCTGCACCACGGCCGTAGAGCTGCTGAAGAGCGTGTGCGAGC
GCGGGCGGTGGGGCGCGCGGCTGCAGGCGGCGCACGGCGCGTGGCGCGCGCACTCCCCGC
ACCGCGCCTTCCTGCAGTACGCCGCGCTGGCCGAGCGGGGCTACGAGGTCGCGCAGACCA
ACGCCGCCTACCTGCTCGACAACGGCGACGTCCGGCTGTTCCCGGAGGCGGAGCGCCACG
TCCGCGCGCTGCAGCTGTGGGGCCGCGCCGCCACGCAGGGCTGCAGCGCCGCCAGGGTTA
AGCTCGGGGACTACCATTACTACGGGCTCGGGACCCCACAGGATCTGGAGGCGGCCGCTC
ATCATTACAGGGTAGCATCAGAGCAGCTGCACAACGCGCAGGCGACCTTCAACCTGGGCT
ACATGCACGAGCGCGGCCTGGGACTAGCCAAGGACGCGCACCTCGCCAAGCGGTGCTACG
ACCTCGCCGCCGACACCGCGCCCGACGCCCGCCTCCCCGCCGCCCTCGCCCTCGCCGCCC
TGCACACGCGCCTCGCGCTGCAGGACCTCGCCGCTGTACGTATGTCCCGCCACTGCACCC
ACACGGCAGACACTCTTAGAGAACATGTCCTTACGGATATATTAAATCCAATAACCTTTA
CATTAGACG
(2409 bp)

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