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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoASG_c28347_g1_i2
Scaffold_idBomo_Chr25
NCBI non-redundant
(nr)		protein_sel-1_homolog_1_isoform_X3_[Bombyx_mori]
Ontology
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0007219 P Notch signaling pathway
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030970 P retrograde protein transport, ER to cytosol
GO:0034976 P response to endoplasmic reticulum stress
GO:0036503 P ERAD pathway
GO:0036513 C Derlin-1 retrotranslocation complex
Transcript
Level		FPKM:14.59 TPM:11.19
ORF EntryO_BomoASG13729_complete:A_BomoASG_c28347_g1_i2
Sequence
(Nucleotide)
CTACATTTGACGTTGATAGAAATCAGTCCTTTAAATTTATTTTAGAGAAGAGTTGAGAAT
ATAGACTTGCATGTAAATTATTGATAAATTAATTGGCCTTTTACTTTAAATATACACGTG
TAAATCTATAAGTGGTCACGGAAACATTCCTTTTATTCGCCGGTTAACGTTAAAACAAAA
CATAAACAAGTGCTTGGGACACGTAAGTGCTGTGAGTGTTGTTATTATTTATTCGAACCG
AAAATATGGACCGCTACAAACTATTAGTGCTTGTTCTGTGTTTTTCGTTGACGACTACCG
ATCCCGTTGGACCCGAATCACGAAAGGACTCCGAGAAAAACGAAGAAGATGATGTCTCGA
GTGAAGTTGAAGAAACGAAAGGGAAACCCGATTCAGAGTACATCAAAGAACTGACTGATG
CTATGAATAAAGAGATACTGACGTTACAGGAGTATGCTGATGCTATGAAGAGTCAGTCGT
CAAAAGATGAAACCAATAAAGAATCACACTTAGAACAAATGGCATATACTTTAAAGCTTT
TACAGAAAAGTCTTAAGAAGCACTCTGAACCAACTTGGCTTCCTAACCAAAAAGCAGAAC
TGTCTGTAAATGAGAAATCACTAGAGGAGAATCCACAGGATATTCTGAACAGTCTACCAC
CATTACCAGAAGAGACAGAACCAGAATTAACTCCCGAATTAAAAGAAGCCAAAGAATTGT
ATGATGCTGCAGTAGCAAAACTAGATCGTCGAACTTTGGATGTCGATGCTTCCATCCTTC
AGATCAAGCAGGCAGCCGAAGTCGGATATGTGCCGGCTAAGATCAAGCTAGCCTGGTCAT
ATCTCTATGGGGAGGGGGTCGAAATAGATTTCGAAAAAGCTAAGAGCATATTTGAAGAGT
TGGCAGCCGAAGGGAATGCTGATGCCCATGCGGGCATGGGCTTCTTATACGCAACAGGCA
TCGGAGTTCCAGTGTCGCAGGCAAAAGCCGTGGTGCATTACACTATTGGTGCGATAGGTG
ATAGCTCGTACGCACAGATGGCGCTGGCGTATCGATACTGGAGCGGTCACACGGTGCAGA
GCTCATGTCCGAAAGCAATGGATCTATACATGAAGGTGGCTGCCAAAGTGGCAAGTAAAA
TGACATTGAACGGAGGCCCGGCCATACATCGCACGCGGCTCATCGACGAGGTGGAGGGCG
GCGGCGGAGCCCTAGACACGGATCTCATCGAGTACTACCAGCTCCTCGCCGAGAAGGGTG
ATGTACAAGCACAGGTGGGTCTGGGGCAGTTACACTTCCAAGGAGGTCGCGGCGTGACCC
TGGACATCAACAAAGCGTATCACTACTTCCAACAGGCGGCCAAGACGGGAAATGCTGTGG
CGCACGCTTTCCTTGGAAAGATTTATTTAGAAGGCGGAGACGGCATAGTGGCAGACAACG
ACACGGCATTCAAGTACTTCAAGAAGGCGGCTGAACTGAACAACCCTGTGGGCCAAAGCG
GACTAGGGTTGATGTATTTACAGGGCCGCGGCGTTCCCAAGGACACGACGGCCGCGTTCA
AGTACTTCACGATGGCCGCCAACCAGGGCTGGGTCGAGGGGCAGTTCCATCTGGGCTTCA
TGTACTTCGGGGGCATCGGCGTGCGGCGCGACTTCAAGCAGGCCAACAAGTACTTCTCGC
ACGCGTCGCAGTCCGGCCACGTGCTGGCGCTGCACCAGCTCGCGCTCATGCACGCTCACG
GGCTCGGCGTGCTCAAGTCCTGCACCACGGCCGTAGAGCTGCTGAAGAGCGTGTGCGAGC
GCGGGCGGTGGGGCGCGCGGCTGCAGGCGGCGCACGGCGCGTGGCGCGCGCACTCCCCGC
ACCGCGCCTTCCTGCAGTACGCCGCGCTGGCCGAGCGGGGCTACGAGGTCGCGCAGACCA
ACGCCGCCTACCTGCTCGACAACGGCGACGTCCGGCTGTTCCCGGAGGCGGAGCGCCACG
TCCGCGCGCTGCAGCTGTGGGGCCGCGCCGCCACGCAGGGCTGCAGCGCCGCCAGGGTTA
AGCTCGGGGACTACCATTACTACGGGCTCGGGACCCCACAGGATCTGGAGGCGGCCGCTC
ATCATTACAGGGTAGCATCAGAGCAGCTGCACAACGCGCAGGCGACCTTCAACCTGGGCT
ACATGCACGAGCGCGGCCTGGGACTAGCCAAGGACGCGCACCTCGCCAAGCGGTGCTACG
ACCTCGCCGCCGACACCGCGCCCGACGCCCGCCTCCCCGCCGCCCTCGCCCTCGCCGCCC
TGCACACGCGCCTCGCGCTGCAGGACCTCGCCGCTAGTCCACTCGCGATGATCTTCATAA
CCGGAGACGAGTCCGCTCTCCTGTACAACTGGGACCTGTACGTGATCACCACACTGCTCG
GGATGCTGGGAGTGGTCATGTACATGAGGAGACCACAGCAGCAACAGCAACAGCAGCAGG
CCGCGAATTAAATCGATTCCATCAGTGAAATCGTCATGAGAATTGTGTTCGATTATACTA
CCAATCTTTAATACACCACAAACTTTATTTCATTCGTTTTTTTTACTTAATGGTAATAAA
AAATATTTTTGTTTTCACTAATGGCAATAAAAATGAAAATAAACACAAATCATATCTCGT
CATCATAGACGGTAAATACTTTGTTGAGATCGTGCGAATAATCGATTTGTATAAAATATC
GATAAACATCGATTAAATGTCGAACAGACCGCACTAGTACAATTTTTAAATACCAATCGT
TGACTCCATTTATTTATTTTTCTATAGAAAACTGTGAAAATCGATTTGCAATTTATAAAG
TTTCTATTGGTTTGTTTAGTAGTTGTCTTATTCTTTGTTAAACCGATAATTTTTGTTTTG
TTTATTGTAATCATAAAATTACATCTCACACGAATGATTTTTTGATTGATTGACGAATTT
TTTTTTTTGTAGCGGTATTTTTGTGTTATTACGTTGTTAAAATCAATTCAGTAATATTAT
AATGTGCCGTAAGTATTAAGTATGTCTGCTCGCCCACCATACAACCATAAGGCGCTTTTC
TTAAATGGTTCTGTAAAATGTAAAAATACTGGTTGTTTTTTTTTTTTTTTTTCAAATTAA
GTGGCGCGTTGTGGTTTGCCATCTACATAAATCATTTTCAATTACAGTAACCATAAATGC
TGCAAAGTTATTCAGTCTTTACGATTTAAAACCTTAATAAATAAATAAATATAGCCCTTG
TAGGCAGACGAGCGTACGGCACACCTGATGGCGAGTGGTCACCGTCGCTTATAGAATTTC
AAATATTTAAAAAAAAAGATTATTTTTATGCACACCAAAGCTATTTTCGAATTAAGCTTA
AATAATAGTTTTTATAATTTTGTATGTGATAAATTTCACGGACATTTGATTAGACTTTAT
AAAGAAAGTTCATCATCACGTTAATTCATTTCAAATTTCAATATCAAAAAATTTGGTTCA
CATTCGGCAAATTCATTGCTCTGGTTGTATGTAGATCGATTGTATATAAATGACAAATAT
GTGATCATAATGAATAGTAAATAGGGAAAGCTATTAATATAATGTTGATTGAAAAAAAAA
(3600 bp)

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