SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoASG_c28309_g1_i1
Scaffold_idBomo_Chr25
NCBI non-redundant
(nr)		proteasome_activator_complex_subunit_4_isoform_X2_[Bombyx_mori]
Ontology
GO:0000502 C proteasome complex
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006281 P DNA repair
GO:0006974 P cellular response to DNA damage stimulus
GO:0010499 P proteasomal ubiquitin-independent protein catabolic process
GO:0010952 P positive regulation of peptidase activity
GO:0016504 F peptidase activator activity
GO:0016607 C nuclear speck
GO:0035093 P spermatogenesis, exchange of chromosomal proteins
GO:0070577 F lysine-acetylated histone binding
GO:1990111 C spermatoproteasome complex
Transcript
Level		FPKM:20.57 TPM:15.78
ORF EntryO_BomoASG13625_5prime_partial:A_BomoASG_c28309_g1_i1
Sequence
(Nucleotide)
GCCGTGCAGACGCGCACCGCCGCCGGCTTCGACCGCACCTGCGACGAACTAGACTTGCTC
GCCACAGGTAACTCGTGGTGGGCTCGACTGGCGTGCTTGGACTTTGCTCAGCCGTTCCTG
TTTTACGGGCTCCCGTTTCTGTGCGATAGTCCGGACAGAGCTGTTCGAGCCGAACAGTTC
GCTTTGAAACTCATGCGTGACTCGCGACTCGAGGTTCGACAGTCGGCTGCTAAGCTGTTG
ACAGGATTGATGCACTGTCGCGCTCTACCCGACGAACAGAGGACGTTGCGTTTGTTGATA
CGCAGCGCTCGATCGAAGCAACTGGTGGAGAGACACTTCGGGGTGCTCGGCATGTGCGCC
TACCTGTCCTCTCGACCGTACAGCATCGGGTCCAAGTTCGGCGACGTGCTGTCCGAGCTG
TCCCGGCACACGAACGCGCCGGACCCGGTCCCCGCGACCATACGACGCGCACTAGCCGAC
TTCAGGAGGACCCACCAAGACGACTGGCCGAAACATAGAGATCAACTCTCCGAAGACGAA
CTGGACATGTTGGCGGATCTCACTTCCCCCCCTTCGTACTTCGCCTAGCTTGCCAACGTC
AGCTGCGTAAATCAGGACCTCCCTATTTATATTGTATATTGTTCAGGTTTCGTTTTAGGC
TGGCGACAGACATCTGTGCAATGTAATCACAATCCGAGCTTTTTTATTTTTGCCAAAACA
ACGGAGCCAATTGTGGATGCAAATATCCGTAAATTTCGTTGCCACACGATAAAATGCTTT
TAAGTCAGTTGCCAGCTTAAAATAAATAAAAGCCGATATATGTAGGTAGTTTAAAAATTT
GAATTTTTGGTAGAAATGTAGCAGAATTTAATCTTGATAAAAAAAACGCAAGAAAGCACA
ACAGACATGTGAGAAATGACATTTGGCTACATTGGTAGCTCGCTGTTTCTTCTACGGTAT
TCTGCTCGTTATAACGGGTTGCGGCATAAATAATAATTCTATTAGACTTTGATATATTTG
TTTCTGTGGGATGTTTTGGGTGAAGACATTTTTATTGGGATTGGATTTTTTTATTAACCA
TCACCAAAATTAAGTTAAGATTCATAAAGTAAACAATTCATTTCGTGACTGGCCCGCAAA
TTATTTTGTATGATTAATACATATACGACGAAAAGTTGCTTTAGTAATAAACTTATTTCG
TATACAGAAAATGTAATGTTTGGAAATTAAATATTTAGAACGGTCATAATTAATTGTTTT
TCATTATTTAAATTGGGAGTAAATCGTAATTATGTGGAATATTCGGTGCACTGTTGGTTT
ATTGTGCAGGGTTTTATTGAAATGTAAATTTTTAGCTCAATATTCTTGAAAGGTCATCGG
GTAATCATAATCATTATATATATTTAAAGTGTCTAATTTTGTATGTCGATCAACTGTAAA
GAAATTTAATTGTTATTTTTTTGTTATATTTATATAAATATGTACCTTATATGTTTGGAA
TATTCGTCGCTTTGTATAGATAATTTCAGTAATCGTGAAAATGATGTCTGAACATTTTGA
CATGACATTCTATCTACTGTAAATAAATAAATGAACAAACACAAATGTACATTAAATAGT
ACAGAGCAGTAAATTCATTGACAGAAATCATCACCGAGCCTAAATTAAAGAAGTACCTTG
ATTCACAAGGTTGAGGAACTACCATAGAATTAATCTGACGATATTCCGTGTATATAGATA
TTGTTTAAATTTTATATTTAATTATTTTAGGAAAATAGCTCAATTTTTTGGCCTCTACTA
ATTTATAAGATATGTATTTTTTGCAACACACAATTTATGTATAGCACTGCAATTAATTAT
GAAAAGTAAACTTTATTAAATCAGAGGTACACTCTTTGTGACGCAATAACTTTCAATTTT
GTCTATGGTTGAACCGCAATTAATAACGTACGTTTTACTACTTCATTAATTTGGGAAGCC
AGATCGGAAGA
(1991 bp)

- SilkBase 1999-2023 -