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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoASG_c28150_g1_i1
Scaffold_idBomo_Chr5
NCBI non-redundant
(nr)		superkiller_viralicidic_activity_2-like_2_[Bombyx_mori]
Ontology
GO:0000166 F nucleotide binding
GO:0000178 C exosome (RNase complex)
GO:0000398 P mRNA splicing, via spliceosome
GO:0000460 P maturation of 5.8S rRNA
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003724 F RNA helicase activity
GO:0004386 F helicase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005681 C spliceosomal complex
GO:0005730 C nucleolus
GO:0006364 P rRNA processing
GO:0006397 P mRNA processing
GO:0006401 P RNA catabolic process
GO:0008380 P RNA splicing
GO:0016787 F hydrolase activity
GO:0044822 F RNA binding
GO:0071013 C catalytic step 2 spliceosome
Transcript
Level		FPKM:21.13 TPM:16.21
ORF EntryO_BomoASG13319_complete:A_BomoASG_c28150_g1_i1
Sequence
(Nucleotide)
GTTCTGTGGAGTCTATTCAGTGAAAATAAAACAACAAAATCTGAAAGAGAATCAGAAATG
TACTCTAAAATCTAAACTGATAAATTGATAAATGGAATGTACTAAATCAATATTGAAAAT
CTGCAAAGTTACCTGTTTAAAATGTCTGACATAAATAGTTTGTTTGACTGTTTTGATGAA
ACACCAATAACTGAAGCTGCGATTCAGCTGCCAAATGTTAAAAATGTTGAAAAACCAAAC
TTGGAAGAGTTGACTGCTGCTGGAAATAAGCGTGCACATGATGACATCCAGTACGCTGAT
ACCTCTGTATCAAAAAAGCCTCGCGAAGAAGAGGAAGACTCTGAATTGATTACCGACATA
AATGTTGATCTGCTCCAATCTCGTATAGTGATACACACGCTAGAAACTCACGAGGGCTGT
ACACATGAAGTGGCAATACCACCTAATCAGGAATATGCTCCTCTTTTACCACTGACAACT
GAACCTGTAAAGCAGTACAGTTTCATATTGGATCCGTTTCAAAAAGAAGCAATATTGTGT
ATAGATAATTTACAATCTGTACTTGTATCAGCTCACACGTCTGCTGGCAAAACAGTGGTT
GCTGAGTATGCCATAGCTCTATCACTAAAAAACAAGCAGAGAGTAATATACACAACCCCT
ATTAAAGCTCTTTCGAATCAAAAATATAGAGAGTTCTCAGAGGAGTTTCATGATGTTGGT
TTAATAACTGGTGATGTAACTATCAATCCCTCTGCTTCATGTCTTATCATGACAACTGAG
ATTCTCAGGAACATGTTGTATAGAGGTTCAGAAATTATGAGAGAAGTTGGTTGGGTTGTG
TTTGATGAGATTCATTACATGAGAGATAAGGAGAGAGGTGTCGTTTGGGAAGAAACACTC
ATCCTTCTGCCGGACAATGTGCATTATGTATTTTTGTCTGCAACTATACCTAATGCACGT
CAGTTTGCCGAGTGGGTCTGTCGCTTGCATTCCCAGCCTTGTCACGTCATTTATACAGAA
TACAGACCCACTCCACTGCAACACTACATTTTCCCAGCCGGTGGTGATGGAATACATTTG
GTTGTTGATGAAAAGGGTATATTCAAGGAAGATAACTTCAACACAGCAATGACAGTGCTG
AACAATGCAGGTGAAGCAGCAAAAGGCGACCAACGTGGTAGACGCGGCGGACCCCGGGAT
AAAAATCAGACCAATATTTTTAACATTGTCAAAATGATTATGGAAAGAAATTTCGCTCCC
GTGATCATATTCAGCTTCAGTAAAAAGGATTGCGAACTATATGCCCTACAGATGGCGAAA
CTGGACTTCAACACAATTGAAGAAAAAAAACTAGTGGACGAAGTGTTTAGCAACGCAATG
GATGTTTTAAGTGAAGAGGATCGGAAATTACCACAAGTAGAGAACGTTATACCTTTGTTG
AGGCGCGGCATTGGCATACATCATGGAGGTCTACTGCCTATACTGAAGGAAACTATTGAA
ATATTATTCGGCTTAGGACTCATCAAGGCTTTATTTGCTACTGAAACATTTGCTATGGGA
TTGAACATGCCTGCGAGAACGGTAGTGTTTACCAACTGTCAAAAGTTTGACGGGAAGGAA
GTTAGATTTATATCGTCAGGTGAATATATTCAGATGTCTGGTCGCGCTGGTCGGAGAGGT
CTCGACGACAAGGGTATCGTTATATTGATGATCGACGAGAAGGTTACGCCCACTGTTGTC
AAAGGCATGGTGCAAGGGAAAGCTGACCCTATTAATTCTGCATTCCATCTCACTTATAAT
ATGGTTCTTAATCTACTGCGTGTAGAGGAAATCAATCCGGAATATATGCTGGAAAGAAGT
TTCTTCCAGTTTCAGAATCAAGCAGCCATACCGGATCTGATAGACAAGGTCAAAGCAAAA
CAGAAACAATACGACGCCCTGTCCGTTAACGAGGAGAACTCCGTAGCTTCATACTCCACC
ATCAGAACTCAGCTAGATTTGCTCGGGGACCAGTTTCGGTCGTTCATAACTAAGCCGGAG
TACTTGAAGCCTTTTTTGCAACCGGGAAGACTTGTCAAGGTGAAAACAGAGAAATACGAA
TACGACTGGGGCATCATAGTGAACTTCAGACATAAATCGAACAAAGGCAAGAAAGGACAA
GAAGAGAATCCTTTGACGGCCGAGCCCGCCATTATTGTCGACATCCTACTGCACGTGAAG
ACGGCGACCGGCGGCGACGGCGAGACCAACGTGCCGTGTCCGCCCGGCGAGTCTGGCGAC
GTACAAGTGGTTCCAGTCGTACACACACTAATATACCAGATCAGTTCTCTTCGGGTGTAC
TATCCTAAGGACTTGAGGCCTTCGGACAATCGGAAATCTGTATTGAAGACTATAGGCGAG
GTGAAAAAGAGGTTCCCCGATGGTCCCCCGCTGTTGAATCCCATTAATGATATGAAAATT
AATGACTCAGTGTTTAAACAATGCGTCGATAGAATCAAGTTATTGGAAGAAAGACTATAC
TCACATCCGATCCATACAGACAAAAACAGAAGCGCCCTGACAGCTGCTTACGACAAGAAA
CAAGAGTTATATGAAGAGCTACAGAACGCTAAAGCGGAACTGAAGAAGGCGAAGAGCATA
CTGCAGATGGACGAGCTGAAGAAGAGAAAACGGGTGCTGAGGCGGCTCGGCTACTGCACC
GCCGCCGACGTCATCGAGATGAAGGGACGCATCGCCTGCGAGCTCAGCAGTGCGGACGAA
CTGCTGCTAACGGAGTTGATATTCAACGGGGTGTTCAACGCGCTGTCTCCGGAGCAGAGC
GCGGCGTTGATCAGCTGCTTCGTTTGCGACGAGAACTCCACGCAGGCCAGCGTCTCCGGC
GAGGAGCTGCGCGGCGTGCTCAGGCAACTACAGGAATATGCCCGACGAATAGCAAAGGTA
TCGATCGATTCTAAAATGGATTTGGATGAAGATACTTACGTTAGTAAATTTAAATGTACA
CTCATGGACGTGGTCCTGTCATGGGCCAAAGGAGCTTCGTTCTTGCAGATATGCAAGATG
ACTGATGTTTTTGAAGGTTCAATAATAAGATGTATGAGACGTTTGGAGGAGGTGTTGCGA
CAGCTGTGCCAGGCTGCCAAGAACATTGGCAACACCGACTTGGAGAATAAATTCAGTGAC
GCGATCAAAATGCTCAAGAGGGACATTGTGTTCGCAGCCAGTCTTTATATGTAGTTTTAA
GAAGAACCGAAATTATACCAATATTGTTTTCGAAAAAAAAAA
(3282 bp)

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