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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoASG_c28138_g1_i1
Scaffold_idBomo_Chr5
NCBI non-redundant
(nr)		28S_ribosomal_protein_S11,_mitochondrial_[Bombyx_mori]
Ontology
GO:0000028 P ribosomal small subunit assembly
GO:0000462 P maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0003735 F structural constituent of ribosome
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0005763 C mitochondrial small ribosomal subunit
GO:0005840 C ribosome
GO:0006412 P translation
GO:0030529 C ribonucleoprotein complex
GO:0032543 P mitochondrial translation
GO:0042769 P obsolete DNA damage response, detection of DNA damage
GO:0044822 F RNA binding
GO:0048027 F mRNA 5'-UTR binding
GO:0070125 P mitochondrial translational elongation
GO:0070126 P mitochondrial translational termination
GO:0070181 F small ribosomal subunit rRNA binding
Transcript
Level		FPKM:16.52 TPM:12.67
ORF EntryO_BomoASG13298_complete:A_BomoASG_c28138_g1_i1
Sequence
(Nucleotide)
GTTTGGAAAATAAATAATAAGTTCGTTGTCTATGTTAATCGCTCAAGTATAAAGATTTCC
GTGAAAGGTTAGAAAGTTAAATTTAAAATGATTAGTGCGCTAAGAAACTCTGTACGGGCT
TCAGTTACAAGCGTAGTGAGATTGTTCCAAACGAGTACGCCTCAAGCTACTGAAAAGTTT
GTTCATAAACGTATTCCTGCTCCAGACGAAGGAGTCCAAGGAGAGAAGATCATTGATCTT
GATTCTGCTCTGAAGACGAAACAAAATTTATTTCCAACCTTAGAATCAGATTACCAACTG
TATAATGGAATTCCCTACAAGGATCTACCGATATGCAATATCCGTGTTAGCCATAACAAT
ACAATATTCACATTAACCGAACCCGATGGCAAGGTCAGAATCATAAGATCATGCGGCATG
GAAGGATTCAAGAACACCAAAAAAGGAACCAACATTGCTGCTCAAACTACTGGAATAACT
ATTGCAACTAAAGCTGTTGTCCAGGGATATAATACTGTACGAGTAAGAGTCCAAGGCTTG
GGACCAGGGCGATTGTCTGCAGTCAAAGGCTTACAAATGGGGGGTTTGAATATAGTTTCA
ATCACAGATAACACACATGTGTCATGGAATCCACCAAGAGCAAGGAAAGCAAGGAGATTG
TAAATCATATTGTAAATATTTATTAAATTATAGTTAAAATAAAATAAAATTGTCATATAA
AAAAAAAAA
(729 bp)

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