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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoASG_c28128_g1_i2
Scaffold_idBomo_Chr23
NCBI non-redundant
(nr)		PREDICTED:_uncharacterized_protein_LOC105391048_[Plutella_xylostella]
Ontology
GO:0000166 F nucleotide binding
GO:0000943 C retrotransposon nucleocapsid
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003723 F RNA binding
GO:0003824 F catalytic activity
GO:0003887 F DNA-directed DNA polymerase activity
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004190 F aspartic-type endopeptidase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0004523 F RNA-DNA hybrid ribonuclease activity
GO:0004540 F ribonuclease activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006310 P DNA recombination
GO:0006508 P proteolysis
GO:0008152 P metabolic process
GO:0008233 F peptidase activity
GO:0008270 F zinc ion binding
GO:0015074 P DNA integration
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0019076 P viral release from host cell
GO:0032197 P transposition, RNA-mediated
GO:0046872 F metal ion binding
GO:0071897 P DNA biosynthetic process
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
GO:0090501 P RNA phosphodiester bond hydrolysis
GO:0090502 P RNA phosphodiester bond hydrolysis, endonucleolytic
Transcript
Level		FPKM:4.47 TPM:3.43
ORF EntryO_BomoASG13288_complete:A_BomoASG_c28128_g1_i2
Sequence
(Nucleotide)
TGTGCTCTTCCGATCTCTCCACTCCATCTAGCCCCGAAAAAGGACAACGAGTGGAGGCCT
TGCGGCGATTATCGCTCTCTGAACGCCAGGACTATTCCGGACAAATACCCAGTGAGACAT
GTGCACGACTGCACCTACAATATAACTGGTTGCAAAATTTTTTCCACCATTGATTTGGTA
AAAGCTTTTAACCAGATTCCTATCTTTCACGAGGACATACAGAAGAGTGCCATAATTACC
CCGTTCGGCTTATATGAGTTCCCACATATGACGTTTGGACTTCGCAACGCTTGCCAGACG
TTTCAACGCTTCGTCGATGAAATGACACGTGGACTAGACTTTGTTTATCCTTACGTCGAC
GACTTTCTGTGCTTTTCTAGAAACGAAGAGGAACACGAAGACCATCTCCGACAACTATTT
AGCAGACTCAGAGACTACGGTGTCATCATCAACACCGCCAAATGTCGCTTCGGGGTATCT
GAAGTCTCATTTCTCGGCTATTCCATCTCAGCCAAAGGAGTAAAGCCACTGGATACAAAG
GTAGAAGCCATAAAGTCATTTCCAGAACCAAAGACCATCAGATCACTGCGAAGATTCTTA
GGAATGATCAACTTCTACCGTAGGTTCATACCAGGCGCCGCTAAATATCAGACTCCCCTA
AATGCTCTTCTGACGGGATCTGTTAAAGGGTCTCACCCAGTGCACCTATCGGGTGACACC
TTGAAAGCTTTTCAAGAATGCAAAGATAGCTTATGTCGCGCCACACTCCTTGCCCATCCT
GACAGCCAATGCAAGCTGGCCCTAGTCACTGACGCATCAGATACTGCGATCGGAGCCGCT
CTACAACAGCAGAAGAACTCTGCGTGGCAGCCACTTGCATTCTTCTCCCGGAAACTTTCT
CCAGCTCAGATGAAATACTCGTCCTATGAGAGAGAGCTACTGGCTATATACGAAGCTATC
AAATATTTTAGACACATGTTAGAGGCCAAGGATTTTACTATCTACACAGATCATAAACCG
TTATGCTTCGCCTTCCACACTCGCAAAGACAAATGTTCACCCAGACAATTCCGACACCTC
GATCTTATATCACAATTTACCACAGACATACAGCACATTGCTGGTAAGGACAACGTGGTT
GCAGACGCACTCTCACGAGTAGAAGAAGTAGAGTTTTCCTTAGACTTCGCAAGGTTAGCC
CAATCCCAAAACACTGATCCAGAACTAAAACAGCTATTAGACAATGGCACATCACTACGC
TTAGAAAAGATCAAGATACGGGAATATCGAACAGAGCTCTACTGCGATACCAGCACCCAG
ACTCCAAGGCCTTACATCACGCCAATGATGCGAAAACAAGTTTTCGAAAACCTGCATGGA
CTCAGTCACCCTGGTACTAATGCCACGATCAAACTGATAACTGAAAGGTACATTTGGCCT
GGAATCAACAAAGACTGCAGAGAATGGACAAGAGCTTGTCTAGCATGCCAACGGTCTAAG
ATAAACCGACACGTTTCTACTCCTCTTGGAACGTACAAGCTACCAAATGCACGCTTCATG
GATATTCACATCGACCTCATCGGACCGCTACCCATATGCGGAGGAAACCGTTTTTGCCTA
ACAGCAATCGATCGTTTCACGAGATGGCCTGAGGTTATACCCATACCTAATGCTACAGCT
GAAACAGTAGCAAAGGCTTTACTCACTGGCTGGGTATCGCGGTTTGGATGTCCGTCTTCA
ATAGTCACCGACCGCGGCCGTCAATTTGAGTCCGCTCTCTTCCAACACCTGTCGAAATCA
ATAGGATTCCATCATAAGAAGACCACTGCTTACCACCCGCAATGTAATGGCGCCATAGAA
AGATTCCATCGTCAGCTAAAAACCGCTATCACTTGTCACGGTAATGAAAACTGGATGGAA
GTGCTGCCATTCGTCCTACTCGGGATAAGAAGCGCCTACAAAGATGACCTGAAAACAAGT
GCAGCCGAACTAGTATATGGAGAGCCACTTCGGCTACCTGGTGAATTTTTCGATCCGGGT
ACTGCAGGAACAACCGACGTCACGGAATATACAGCACGCCTTCGTCAATTCGCCAACAAC
CTTAAACCAGTACCTGCTTCAAGACACACACGACAATCCATCTTCGTCTATAAAGATCTA
GCTACCACCAGTCATGTGTTCTTGAGAGAAGATGCGCTGAGAGCCTCTTTACAGCCAGCG
TACACTGGACCACATCCTGTTATAGAAAGAAATGATAAATATTTTAAACTACTGATAAAA
GGCAAAACGGTGACAGTAACTGCTGATCGCCTTAAGCCAGCATACACACTTCCTGAAAGA
AGATCTGTTAGATTTCCTGCACATCTCCGGGACTTCCAAACTTAATCGCCCTACTCGGTC
TCTGGAGGGGGGTGATGTGGCGTGCTGCCCTATGTGAAACACAATCGCAGAATCCCGGGA
TGGCAGCGTCTCCTTAGTGCAGCCCTGTACATCTCGCCACTCAAACGAATGTACAGTGAA
TGCTGCGGTGACCGAAACCGGTCGCCAGTCGAGGCAACCACACCGAGACGAACGCACGTC
GCTCCGCGCTCCGCCGCTCGCAGATATTCAACACGATACAACAACATTTTACCGACCAGC
AGCTATATTGGTGACCCCGACGTGATTTGAACACGCACGATGACAACCGTAACGGAGAAA
GAGCACGTAGAAGATCAGAGGCCTGCAGAGTTGTTTCGGGTCGGAGTTAGAGTGCCGCCA
TTTTGGCCCGAGGAGCCGGAGATATGGTTCGCGCAAGTAGAAGGACAATTCGCGATATCC
GGCATTACATCAGACACCACGAAGTTCAACTACGTGATTGGACAACTTGACCATCAGTTC
TCGAAGGAAGTGAAAGACATTATCATCTCACCACCAGCCACAGATAAGTACGAGAAGCTA
AAGTTAGAACTTATCAAACGGCTTAGCGCTTCGCACGACAAGAAGGTGAAACAGCTGCTA
ATGCACGAAGAGTTAGGCGAACGAAGGCCATCACAGTTCCTTCGCCACCTACAAAGCTTA
GCTGGGCCCACTGTGCCCGAAGAGTTTGTGAAGACTATCTGGACCAGCCGTCTGCCGCGC
AACATCCAGACCGTGATCGCCGCTCAACCTACCTCGTCGCTAGAGGTACTTGCTGATTTG
GCCGACAAGATACAAGACATCGCCACTCCTACACCTCAAGTCGCAGCAGCTCAAGCAGGA
CCCGGGTCCACCATGGACGCTATGGCACGAGAAATCGCTGAGTTACGTAAACAGTTACAA
AATTTATCATCGCAGTTAAACTCGCAGGACCGGCGGTCTCGCTCCACACAACGCCGTGAC
CGTAGCCGATCAATGACCAGGTCCGTATCCAACTACCGCAGATTCCCGGAATGTTATTAT
CATTTCAAATTCGGTAGCAACGCAAGAAACTGCATAAAACCATGCGACTTCGAGCCGGAA
TCTCGAGATAGTAGTCCAAGAAGAATCCCGGGAAAATCTCGGGATCCCGGGAAAAATTCG
GAAAACTCCAGGGGTGGTCAGTAATGGCGACTGACGACTGCCCTCGCTCCTCTGGTCGCC
TGTTCGTAGTAGATCGTCGGACCAAGGTACAATTCCTCGTAGATACGGGAAGCGACGTCT
GCGTGTATCCACGATCCGCTTTATCGGAGCGACGTCCTAAAACAAACTTCCAGCTATCCG
CCGCTAATGGTACACCAATCAACACGTACGGATATGCCAATCTAGAGTTAGACCTAGGAT
TACGACGCGATTTTCCCTGGCGGTTCATCGTCGGAGATGTAACCAGAGCCATCATTGGAG
CCGATTTCCTCAAACATTACGGCCTAATAGTCGACATCCGCAACAAGTGTCTTCTGGATA
GCCTTACAACACTGTATGCTATAGGTAAACCTGTAAACTCGTCGAACACGATATCATCTA
TAAAGATACCACTCGGCGGGTCCAGCAGATACCACAAGTTACTCACCGAGTTCCCAGAAG
TAACACACCCATCCGGACACCATCAAGAAATCAAGCACAATACAGTTCATTACATCAGGA
CAACGCCAGGCCCACCAGTGTCATCTTCTCCCCGTCGACTTGCACCTGACAAACTACAGA
TAGCCAAAAAGGAATTTGAGTCGATGCTTGCATCAGGAACTGCCCGCCCATCTGAAAGCC
CTTGGGCCTCTCCACTCCATCTAGCCCCGAAAAAGGACAACGAGTGGAGGCCTTGCGGCG
ATTATCGCTCTCTGAACGCCAGGACTATTCCGGACAAATACCCAGTGAGACATGTGCACG
ACTGCACCTACAATATAACTGGTTGCAAAATTTTTTCCACCATTGATTTGGTAAAAGCTT
TTAACCAGATTCCTATCTTTCACGAGGACATACAGAAGAGTGCCATAATTACCCCGTTCG
GCTTATATGAGTTCCCACATATGACGTTTGGACTTCGCAACGCTTGCCAGACGTTTCAAC
GCTTCGTCGATGAAATGACACGTGGACTAGACTTTGTTTATCCTTACGTCGACGACTTTC
TGTGCTTTTCTAGAAACGAAGAGGAACACGAAGACCATCTCCGACAACTATTTAGCAGAC
TCAGAGACTACGGTGTCATCATCAACACCGCCAAATGTCGCTTCGGGGTATCTGAAGTCT
CATTTCTCGGCTATTCCATCTCAGCCAAAGGAGTAAAGCCACTGGATACAAAGGTAGAAG
CCATAAAGTCATTTCCAGAACCAAAGACCATCAGATCACTGCGAAGATTCTTAGGAATGA
TCAACTTCTACCGTAGGTTCATACCAGGCGCCGCTAAATATCAGACTCCCCTAAATGCTC
TTCTGACGGGATCTGTTAAAGGGTCTCACCCAGTGCACCTATCGGGTGACACCTTGAAAG
CTTTTCAAGAATGCAAAGATAGCTTATGTCGCGCCACACTCCTTGCCCATCCTGACAGCC
AATGCAAGCTGGCCCTAGTCACTGACGCATCAGATACTGCGATCGGAGCCGCTCTACAAC
AGCAGAAGAACTCTGCGTGGCAGCCACTTGCATTCTTCTCCCGGAAACTTTCTCCAGCTC
AGATGAAATACTCGTCCTATGAGAGAGAGCTACTGGCTATATACGAAGCTATCAAATATT
TTAGACACATGTTAGAGGCCAAGGATTTTACTATCTACACAGATCATAAACCGTTATGCT
TCGCCTTCCACACTCGCAAAGACAAATGTTCACCCAGACAATTCCGACACCTCGATCTTA
TATCACAATTTACCACAGACATACAGCACATTGCTGGTAAGGACAACGTGGTTGCAGACG
CACTCTCACGAGTAGAAGAAGTAGAGTTTTCCTTAGACTTCGCAAGGTTAGCCCAATCCC
AAAACACTGATCCAGAACTAAAACAGCTATTAGACAATGGCACATCACTACGCTTAGAAA
AGATCAAGATACGGGAATATCGAACAGAGCTCTACTGCGATACCAGCACCCAGACTCCAA
GGCCTTACATCACGCCAATGATGCGAAAACAAGTTTTCGAAAACCTGCATGGACTCAGTC
ACCCTGGTACTAATGCCACGATCAAACTGATAACTGAAAGGTACATTTGGCCTGGAATCA
ACAAAGACTGCAGAGAATGGACAAGAGCTTGTCTAGCATGCCAACGGTCTAAGATAAACC
GACACGTTTCTACTCCTCTTGGAACGTACAAGCTACCAAATGCACGCTTCATGGATATTC
ACATCGACCTCATCGGACCGCTACCCATATGCGGAGGAAACCGTTTTTGCCTAACAGCAA
TCGATCGTTTCACGAGATGGCCTGAGGTTATACCCATACCTAATGCTACAGCTGAAACAG
TAGCAAAGGCTTTACTCACTGGCTGGGTATCGCGGTTTGGATGTCCGTCTTCAATAGTCA
CCGACCGCGGCCGTCAATTTGAGTCCGCTCTCTTCCAACACCTGTCGAAATCAATAGGAT
TCCATCATAAGAAGACCACTGCTTACCACCCGCAATGTAATGGCGCCATAGAAAGATTCC
ATCGTCAGCTAAAAACCGCTATCACTTGTCACGGTAATGAAAACTGGATGGAAGTGCTGC
CATTCGTCCTACTCGGGATAAGAAGCGCCTACAAAGATGACCTGAAAACAAGTGCAGCCG
AACTAGTATATGGAGAGCCACTTCGGCTACCTGGTGAATTTTTCGATCCGGGTACTGCAG
GAACAACCGACGTCACGGAATATACAGCACGCCTTCGTCAATTCGCCAACAACCTTAAAC
CAGTACCTGCTTCAAGACACACACGACAATCCATCTTCGTCTATAAAGATCTAGCTACCA
CCAGTCATGTGTTCTTGAGAGAAGATGCGCTGAGAGCCTCTTTACAGCCAGCGTACACTG
GACCACATCCTGTTATAGAAAGAAATGATAAATATTTTAAACTACTGATAAAAGGCAAAA
CGGTGACAGTAACTGCTGATCGCCTTAAGCCAGCATACACACTTCCTGAAAGAAGATCTG
TTAGATTTCCTGCACATCTCCGGGACTTCCAAACTTAATCGCCCTACTCGGTCTCTGGAG
GGGGGTGATGTGGCGTGCTGCCCTATGTGAAACACAATCGCAGAATCCCGGGATGGCAGC
GTCTCCTTAGTGCAGCCCTGTACATCTCGCCACTCAAACGAATGTACAGTGAATGCTGCG
GTGACCGAAACCGGTCGCCAGTCGAGGCAACCACACCGAGACGAACGCACGTCGCTCCGC
GCTCCGCCGCTCGCAGATATTCAACACGATACAACAACATTTTACCGACCAGCAGCTATA
(6840 bp)

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