SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoASG_c27907_g4_i1
Scaffold_idBomo_Chr26
NCBI non-redundant
(nr)		upstream_activation_factor_subunit_spp27_[Bombyx_mori]
Ontology
GO:0000500 C RNA polymerase I upstream activating factor complex
GO:0001165 F RNA polymerase I cis-regulatory region sequence-specific DNA binding
GO:0001168 F obsolete transcription factor activity, RNA polymerase I upstream control element sequence-specific binding
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0006325 P chromatin organization
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006356 P regulation of transcription by RNA polymerase I
GO:0042790 P nucleolar large rRNA transcription by RNA polymerase I
Transcript
Level		FPKM:30.73 TPM:23.57
ORF EntryO_BomoASG12853_5prime_partial:A_BomoASG_c27907_g4_i1
Sequence
(Nucleotide)
GACGAAAAGGAGCCAGAGGAAGAGGAGAAATCGGCTGATGACAGCGACGACGATAACTGG
GGAAAGCCGACCCGCAAGAAGAGGAAAGTAGAAGAGAAGAAGAAGAAAGGGACAGCGAAA
CCCAAAAAGGAGAAAAAGAAATCGGGCGGTACAGGTAAGGGCAGTGGCTACACCCGCGCT
TACAAACTATCGCCCGCTCTGTCCGAGCTCATGGGCGCTGAGGAGATGCCCCGGCACGAG
GTAGTCAAACGAATGTGGGCCCTGATCAAGGAACGTAACCTTTATGATCCGAACAATAAG
CGCTTTGTGATCTGCGATAAGGACATGCACAAGGTCATAGGCATACAAAGATTTAGGGCT
TTCGGAATGATGAAGTATTTGAAAACCCATTTCTTGGACTGAACTATACATACGCTTTTA
CTGTATGATTGTATGATGAGGTATTTTTTTTTGAACATTTTGCTAACATATTACTCAGAG
GTATCTATTTATCGGAACGGTTTTGTTTGGAATGTCGCACCTTTAAAATTATAGAGACTC
ATTTTGAATAATTCAGTAGGCAACGGCTTGGTTGCAGAATGCTGCGGCTTGGCTCTGCTC
CTGGCAT
(607 bp)

- SilkBase 1999-2023 -