SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoASG_c27885_g1_i1
Scaffold_idBomo_Chr15
NCBI non-redundant
(nr)		E3_SUMO-protein_ligase_RanBP2_[Bombyx_mori]
Ontology
GO:0000413 P protein peptidyl-prolyl isomerization
GO:0001975 P response to amphetamine
GO:0003723 F RNA binding
GO:0003755 F peptidyl-prolyl cis-trans isomerase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005635 C nuclear envelope
GO:0005643 C nuclear pore
GO:0005739 C mitochondrion
GO:0005875 C microtubule associated complex
GO:0006457 P protein folding
GO:0006607 P NLS-bearing protein import into nucleus
GO:0006810 P transport
GO:0008270 F zinc ion binding
GO:0008536 F small GTPase binding
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016874 F ligase activity
GO:0016925 P protein sumoylation
GO:0019789 F SUMO transferase activity
GO:0031965 C nuclear membrane
GO:0032403 F protein-containing complex binding
GO:0033132 P negative regulation of glucokinase activity
GO:0042405 C nuclear inclusion body
GO:0044614 C nuclear pore cytoplasmic filaments
GO:0044615 C nuclear pore nuclear basket
GO:0046872 F metal ion binding
GO:0046907 P intracellular transport
GO:0051028 P mRNA transport
GO:0090526 P regulation of gluconeogenesis
GO:1990723 C cytoplasmic periphery of the nuclear pore complex
Transcript
Level		FPKM:24.52 TPM:18.81
ORF EntryO_BomoASG12828_complete:A_BomoASG_c27885_g1_i1
Sequence
(Nucleotide)
GGAACATAACTCTAAAGAATTGAATTCTTTAATAGAAGAGAGCAAATTATATGTTGCATC
TCATCATTTTGATGAAAATGAATATGACAAAGTTATTGACATTGCTTCATCTTTAAAATC
TCCAGAAGCTTACTACCTTCTTGGTCAAACATATACTAAAATTGCTGTTTTAGAAAATGA
TAATTCTAAAGATTTTTCAGTTAATACTAATTCAAGCTTTTTTGTAATGATGAAAAAAGC
TAAGCATTATTGTTACAAAGCCTTGGACAGGCTTAGACAAATTGAACCTGACAGAAACCA
CCCTTTGTATGTCAACATCCAGGATTTGATAGAAAACATTAAAACTTACTTAAACAGAGC
AGATCCTGATGTATCAATAAATGACAATTTTAAGGATGACTCTGATTCATCTGTTGACCT
TTTGCCAGTCCGAGCTACCGCACAACATACTCGTAATCTGAGTTCTACGCCTAAACCTAA
ACCTAACCTAAACAACTCAAATATGACAAATTATCGAACAGCGGTTGATTCTCAATTCAT
GGACACTTCAAGAATTGATCATCAATTTTTAGAAAGAATAGAGACAGAAATCAGAAACTT
AAACAAGAGAGATGCTACAATTAATGATTTTATGCAACAAACAAGAATATGGTTTGATGA
GAATCGCAACTTAGGAAATCAAATAACTAACACTATTCACTCTAATGTCCAAATAACTAC
GGATCAAATAAAACTTCTAAAAATTTCAGTAGATCATGTAAAGGATCAAATAGACCAGTG
TAGAAATGAATGCAAAGATGTCGGTGAACTAAAAAAGCAAATTGCTGAATTAAAAATAGA
AGTAAACAAGTTAAAAAAACCAGCAGAAGCAAGTGATGAGAGTGATTTATACAATACAGA
TAAAGAATGCAGAAATAATGAGAACACACCAGGCTATGCTACACAACTACCTTATAGTCC
TGCTCAAGCTATGGCTTCATATAATCAGAGACTTGTTCCACCTTTTCCAGCACCACCTAA
TCCATACCATTTATATGGACAAAATTTTTATAACTTATACAATCACTACGCCCAAATAGC
TCAAACGTCAACACCTGGAACTGCTCCTATATTTGAACATGCCAGGTCCCAAATGGCGCA
ATATCCAGGTGTATATCCAACACCAGAACAAATGTTTTTAGATATTGCACAACTTGTTCC
ACCAGCTGTACCAGTACCCCCAGTTCCGACTGTCCCAGTGCCTTCAGCTCCGACTATCCC
AGTTGTACCAGCTACACCAATAACTACTGTTACAACAACAGCTAAATCAACAGTTCCGAT
TATTTCAACACAATCTTCAATATCCATCACATCTAAATTGGTAAATAAAACATCCAAAGA
GACAGCTAAATCGTTACCTGTCAATGTTGTGATAACATCTTCTGATCCATTACCTACATG
TACTACAGCACCACCTCCTATACTGAGTGTCACTATTCCTCCTAAACATATAAAAAGCTC
CCCTCATAATTATCAAATTCCTATGCCATCTGTGGATGAAACAAAAACAGTGTCACCATC
CGTTTTTAGTATTCCAAATTCAGGAATAACTGTGAGTTCATCGACAAATTGGAGTCAATC
ATCCATTTTTAAAACAACGCAGTCAATTCCTGTACTCAACAAGATGGGTGATATATCATT
GATAAAGGATGCTGCTAAAACTGAAATTAATAATGCCAGTATTGATCCTTCACCAAATGC
TAGTCTTAATAAATCGAGAACAATATCAGAACGTAGCAATACATCTATTGAAAGCTATGA
TCCATGTCCAGACTTCAAGCCGATAGTACCATTACCTGCCGAAATAAAAGTGAAAACCGG
AGAAGAAGATGAATTTACAATTTTTTCTTCAAGGGCTAAATTGTTTAGGTTTGTAGACAT
GCAATGGAAAGAAAGGGGCCTCGGCGAAATTAAATTATTAAAACATAAAATTACTGGAAA
AGTAAGAGTTTTGATGAGACGTGAACAAGTTCACAAGATTTGTGCTAATCATGTAATTAC
TTCTGAAATGGAAATTTCACCAATGAAAAATGAAACAAAGGCCTATTTTTGGGTCGCCAA
CGATTTTGCAGATGAAGCAGTGGTACTTGAAATGTTTTGCATACGTTTCAAGACTTCTGA
TATAGCACAGGAATTTTATAGAAATTTTGAAAAAGCACGCTTAGAAGCAGCTAATTCAAA
GACTGTTGAAATCCACACTGACAAACATGATTTAAAAAATACTACCAAGGCATCTACCCC
TAGTGACGTTTCTTCCAAATCTGAAGACCATCCTAAATCTACTCCTGGTAAATCTGTGCT
TGGAGGATTCACTTTTAGTAGTACACCAAACATAAAACCAATTAAGGATGAAAAAGAAGT
CTGTTCTAAACCAACTGAAACAACTGTAGGTAAATCCAACCCATTTACTGACTTTTCTTT
GAAATCTATGTCAAGTTCACCATTTTCCAATTTGTCAACTGTGAATACGAATATATTTAG
TAAAAATACTACACCTCCACAAGACGCTGCTAAAAAATTAAACATATCTGACACAGTAGA
GGACTTTGAACCCACTGCAGAATTTAAACCAGTTGTACCTTTACCTACATTGATTGATCA
AAAAACTGGAGAAGAAGACGAAAATGTGTTGTTTGAGAACCGTGCTAAACTCCTACGTTT
CGATGCTTCAGACAAAGAATGGAAAGAGCGAGGACTAGGTAACATGAAGTTACTTATACA
CAAAGAAAATACCCAAAAAGTACGATTATTAATGAGACGAGAACAAACTTTGAAAGTATG
TTGCAATCATTCAGTAACAAAATTTATGATATTCCAAAAAATGCAGAATATGGAGAAAGC
TGTTACTTGGTGCGCTAAGGACTTTTCAGAAGGAGAACTGGTAACACAAACATTTTGTTT
GCGTTTTAAAACTCCAGAGCAATGCGGAAAATTTATTGATACTGTAAACATGGCACAGAA
AAATATGGAAGATGAATCAAAAACTTCCAAGGAAGGAAACAATGCAGCCACACAGAACAA
TCAAACTGGATTTGGAGATAAATTTAAGTCAAAACCAGGGTCTTGGTATTGTGAAACATG
TTATACCAATAACTTGGAAAGTTTTGACAAATGTGCTTGTTGTGAACAACAGAAACCACA
ACTTGTTGTGAATAATAAAGAATTAGGTTTTGGAGACAAATTCAAAAAGCATCCAGGAAC
ATGGGAGTGCCCGATGTGTTTAATTCGCAATGAAATTGGAGTAAAAAATTGCATTGCCTG
TAAAACACTTAAAGATCCTTCAGAAACAAATAATAAACCAGAACCAGAAGTACAACCATT
GCAATATTCTTATGGAATACCTGGTCAAAATGCTAAAACCTTAGAAAATAAAACAATACA
GTTTCAAAATACAAATATTCAAATATCAACTGATTCAAAAGCTTCTATTCCGAAATTTAA
ATTTGGTATTGCACCAGCATCACATGAATCAAACGAGGAAACTAATTCAGAAGTTGATGC
ACCCACTTCCACATCTATATTTGATGGTACTGGTACACACACATTTAAATTTGGTATTCC
ATCAAATTTGACTGTAAAGCCCCAAAATTCACTTGAAATTAAAAAACCAATGAGTACAAT
GTTTGATTCACCTAAGACTTCAGTAGCTGCTGAAAAACCTTTGAACATAAATTTAAAAAT
AGAACATGAAAATGAGAGTAACACAGCTGTATTATCTAAATCAAAAGATCTTACGTTTGG
TTCTAATGAAAGTGGAACATTCAATTTCGTTTTTAAACCAAAAACTCCAGTAAAATCCAA
GAGTCCATTGAAAAATCCAAAAAGTCCTGGTGAGGACAGTGATGGAAATGATGAGTGTGT
GTCAGAAGAGGAGTCGTCCCAGATACAATTTACACCTGTTATTCCCTTGCCTGATGAGGT
TCAAGTTGTAACTGGGGAGGAAAATGAAACTGAACTTTATGGCCACAGAGCCAAACTATA
TAGATTTATGGCTGGCGAATGGAAAGAGAGAGGAATCGGAGTTGTAAAAATTTTGAAACA
CAAAGATACAGGCAAGTTAAGAGTTGTAATGCGACGGGAGCAAGTTCTAAAAATATGTTT
AAATTATGCATTAGCGCCTGAAATTACATTTACTCCCAAAGATGAAAAAACGTGGTTGTT
TGCTGCTAATGATTATAGTGAGGGAGAGTTAAGCTTACAACAATTTTGCCTTCGATTTGC
AAATAAAGAAACTGCTACTGAGTTCAAAGACGCAGTTGATAAAGCCAGGGATGGTAAATC
TATTGAAATAATGAAAAAAGATGATAAATGTAATTCAGAAAGTATTTCTGGAAAGAGTGA
ACAAAATATTGATGAGGATGATGTTATTTTTGTGAGTGAAACAGTTGCCACTGTGGAAGA
AAAGCAGAAAGCAAAGGATCTATTACTTCCGGAAAACTTTTACAATTACAAATGTAAAGA
TCCATGTCAAGGATGCCGGGGTTGCAAAGAAAATGAGTTTGTAAAAAAAACTGATTCTCC
AGTGAATATTAGCAACTCAACAAATCCACTAGAACATATGACTATGGCAGCTCTTCTATC
GACTCCTAGTAAAACGACTCCATCTTCATTTCAAAGTCCTACTAATTCATTGTATGGCAC
TCCATCTAATTTTGAAAAGACTTACGATACCTCAATTTTCCGTACTCCTCTAGGATCAAT
TGGCTCATTAAAATCCGATACACCTACATCAACAATAAAAAAATCTGATCTTTTAATTAG
CAAAGAAAATGATTCAATACAGAAACCCTCAGTTTATTCAACATCAACTGTTGAGGAGGT
TGAAGCAACAGAGATAAATTCAAAGTCTAAAGGTGTTATACTTGCTCCCCCAAAACTTAC
TAATGTTCCCTCAAATGAACAAAAAGCTCCAGAAAAAAGCTCCATTTTTACTAGTGGTCA
AAACAAACCTATGTTTGATCAATCCAAATTTCTATTTGGTAGTGCTGCTGCTGGTACTTC
TAGTAATAAATCAATTTTTTCATATTCAAGTGATAACTCACCTAAAAATCCAAAAGATGA
TGTGAAATCAATATTTGGTGGAGCCCAGAAAGACTTTTTATTTAGTAATGTAGCACAAAG
TAAAATTTTTGGCCCAGGATCAATAGCTAGTAATCAATCGAAACCCAGTCTTTTTAGTAC
ACAACCACAGACTGAAGAAAAAAAGAATGTGTTCGTAAATAATGACTTGCAGTGTGGGAA
TAATGCAACTATTAATTCTAATCAGAAAAAAACAAATGAAGACATCTCAGAAAAATCCAA
TGTAGCCAAAAAAGAAGAGATAAATAGTGAAGGACCCTTCAGAATTGATAATAAACTATC
ATTTGCTGCTTTGTCTACGGGTAGTGGTGATAATTTTCAGAAAAAGGCCGATTTTCAATG
GGAGGGTGCAGGTCAGCAACTGTTTGCTGGTGGACAGAGAATAGAGGGAGATAATTCTAA
AACTGAAAGCAATGCAGTAACCGAAAAAAGTGGAGCTGCAGGTGATGAAGAATATGACCC
ATATTATGAACCTATTGTACCTTTACCTGAAAAAATTGTGATCACTACTGGTGAAGAGGA
TGAGGAAAAATTGTTTGGCGAAAGATGCAAATTATTCCGTTATAATGAATCTCAAGAATG
GAAGGAACGTGGTGTAGGCGAAATAAAAATTCTGTATCATCCAGAAAGAAAAACGTACAG
ATTTTTATTAAGAAGAGAACAGGTTCATAAAGCTGTATTGAATATGCTGTTATTTGCGGA
TTTGGAATTACACCCAATGAAAAATTCTGATCGAGCATGGATTTGGGCTGGGATAAATTA
TGCAGAAGACCCATCTGGTCAGCAGGAGACCCTAGCTGTCCGTTTTAAATCGATCGAACT
GTTCAATGAGTTCGGCAATAAGGTCGCCCAATGTATACAGAAGCTGCAAGATGAAACAGC
TGCTAAGCCTATTGAAGTGAAAAAATCTCAAGAAACAAATGAGGCCAGTTTCACCAATCC
CATGCGGTTGCCGAAACATTTGCAAGACAGTGCACGAGCAGACTACGCGATGACGGCAAA
AGTGGAACAGCAAACTCAGAGAGACGAAGTCGTGGACCCGAAACCAGAAGCTGTGTTCCA
AGTCAGACCATCACCGTCCAAAGAAAATTTTCAACAAGTACAGTTCCAAGAAATGCGCCA
ATCAAAGGAATATGACGTTGATGAAGAATATGACGACGATAATGGCGAAGATAATTATGA
TGAGTATGATCCCGACTATGAGCACAATGAATACGACCATGAATACAATGAAGATGAAGA
GGAAGAATCTGGTGAATATTATTCGTGTGATGGAGAAGCAGTTATCAAGCAAGGCAGTTC
AGAAACGACATGTGAGAACGCTCGCATCATCGTGATATTTGATCAGGATGTTTGCTCACC
TAAAATTCTGATCACTGACAGTGGAACTGGAGAAATCCTTGCCGATATGCTTATAAGCAC
AGATACTGAATTTGAGATTTCTAGTGATACTACGTGCAAATGGTCAGGAACGGACTTTAC
GAGCAATGATCCCGTTGAAAAGTCTGTAACAGTTAACTTCCCCGATAGTGAAGTCGCAGC
ACAGTTCCATGAAAGTTGTGAGACTTTATGTAAAGGTGCATCGCTGTACAGATCAGATCC
AGAATCGTAGGAATATTTCAAAGTATTTTAATATAGTTTTATAATTTGTGTTTAAGAAGT
AGGTTTTGTGCCACCTTGGTATTTGAACAAAGTTATCATCAATATTTTCACATATTTTAT
TAATGTAATTTTTAATTTAAAAACAACAAGTAAAATGCGAGTTTTTTTAATATATGGTAC
ATTACCACCACCACCACCACCACCACTACCACTTATGAAACTATCACTAATGCATATAAT
TATAATGTTTAGTGTGATTTTACAAAAATCAATAGCACGCTGTCTGTGAGATATTTCATA
GTAAGTATAGTACTTAAAATATTTTGTCTTACTATTTACTAAATCATTTTGTTTTCAATA
CATTTATAATTATCTTGTAATAAATATGTGTTATAACTTATCACAAGGAGATCTAACCAA
CACTTGTTACTTATTTATTAAAAAGATAAAAAAGTAGTAAATTATTTTTGTATTTTATGT
CGTTCCTAGTTGGTTAGGTCTTCTTGTATTCCTTTCTTGTATTAAGTTAATATGTAGAGC
TGTAAACCTATAAGTTTCATAGTAACTTCACAGTTCAATGATTCAGTCAAATAAAAAGAC
TACAGAAGAGGACATAACTCCGAGTAAAATTGACATTATTGAAGTATAAAAATGTATGTT
GTTAAATAAATCAAATATCGTCGTGTTTCCCTGTATTACGTGGATTATAAAATAATTGAT
ATTATAGAAATGAGAAAAGGATTGAATTTCAAATTATGACATTAAACAGTAAATAAATGC
ATATAGGACGAAAAAAATAATCTTGTTCTCATTTTGGAATCTGATGTGGAATGTATTGTG
GAATGTGAAGAACTTACTTATAACGTAATAAAGATGTTGAAATAGGTAGATCGGA
(7615 bp)

- SilkBase 1999-2023 -