SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoASG_c27883_g1_i2
Scaffold_idBomo_Chr20
NCBI non-redundant
(nr)		DNA_ligase_1_[Bombyx_mori]
Ontology
GO:0000166 F nucleotide binding
GO:0003677 F DNA binding
GO:0003909 F DNA ligase activity
GO:0003910 F DNA ligase (ATP) activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0006260 P DNA replication
GO:0006281 P DNA repair
GO:0006310 P DNA recombination
GO:0006974 P cellular response to DNA damage stimulus
GO:0007049 P cell cycle
GO:0016874 F ligase activity
GO:0046872 F metal ion binding
GO:0051103 P DNA ligation involved in DNA repair
GO:0051301 P cell division
GO:0071897 P DNA biosynthetic process
Transcript
Level		FPKM:10.40 TPM:7.98
ORF EntryO_BomoASG12826_complete:A_BomoASG_c27883_g1_i2
Sequence
(Nucleotide)
TGATGACTGTCAATACGACATCCAGCAAGTTAAAATTTTGAAATATTCCTGAAACCAGTC
ACAACATGGCTCAAAGGAGTATCACGTCATTCTTCAAGAAAACTCCATTTACACCTATGG
AAATAAAAAGTAATGGTGGATCCAAAGTAAGCCATGTAAATGGGGACACATCACCCATAT
CCGACGAAAAAGACAAGCCTTCTGAAAGACAACAATCCAACAGCATAGATAATGACGGTG
ACTCCCAAGATTCTTTGAAACCGAAAAATAAAGCTAAACGACAACGTGTGATAAGCTCTA
GTAGTGAATCAGAATCTCCAGTTAAAGTGAAAAAGGAAGACCTTTCAGACAATGATGACT
CTATAACTTTAAACAAGAGCGTAAACAAAACTTATGACTCACCAAAAAATAAAAAAGCTA
AAATAAAAAAAGAAATCAAAAGCCCATCACCTAAAAAGGGTGCAAAGAGTTTGTCTCGTG
ATGAGGTAAAAGAAAACAGCTTAAAATTGAAGATTGTTGGATCAAAGGAAAAAGACAATA
TTGTGAAAAATACCGAGCATATTGATAATATTGAAAATGAGAGTGAAGAAATACAGAAAG
TAGCAGAAAATGCATACAATCCATCAAAATCAAAATACCACCCTATAAAAGATGCTTGCT
GGTCTAAAGGCGACCCAGTGCCGTATCTTGCATTAGCTAAGACTTTGGATCTTATAGAAG
GAACATCAGCTCGACTGAAGATAATAGAAATATTAAGTAATTTTTATAGGTCTGTAATGG
TGTTGACTTCAGAAGACTTGTTGCCTTGTATTTACTTGTGCTTAAATCAACTAGCACCAG
CATACCACAGTTTGGAGCTTGGCATAGCAGAAACGTACCTAATGAAAGCCATAGGCCAGT
GTACAGGCCGTACCCTAGCACAAGTGAAGTCTGCAGTACAGAAGTGTGGGGATATGGGAA
GAGTGGCAGAACAGGCTCGAGCCGCACAAAAGACAATGTTTGCGGCCCCTAAACTTCAGA
TAAGAAAGGTTTTTGCTGCACTAAAAGAAATTGCTCACATGACTGGTCAAGCATCAGTGA
ATAAGAAAATAAATAAAATCCAGTCCTTGTATGTCGCCTGCAGAGATTGTGAAGCACGAT
TCCTAATAAGGTCCCTGGAGGGGAAGCTGCGCATCGGCCTGGCGGAGCAGTCGGTGCTGC
ACGCGCTGGCGCTGGCCGTCGCCACCACGCCGCCCGGACCCAACCTGCAGCTCGACGCGG
CGCAGCACATGTCCGCCGACAAGTTCAAGGCGCTGGTGGAGCAGCACGTGGCGGTGGTGC
GGCGCACGTACTGCGAGTGTCCCGACTGGGCCGAGCTGCTGCACGAGCTGCTGCGCGGCG
GCGTGGCGGCGCTGGCCTCCCGCTGCAGCATGCGCGTCGGCGTGCCGCTGCGCCCCATGC
TCGCGCACCCCACCCGCGCCGTGCGCGACGTGCTCGCCAGGTTTGAGAATGAAGAGTTCA
CCTGCGAGTACAAGTACGACGGCGAGCGTGCCCAGATCCACGTGCCCGCCGCGCCCGACG
ACAAGCCGGACTTCGCCAACGCTGCCATATTCAGCAGGAACCAAGAAAATAATACCGCCA
AGTACCCGGACGTGCTGAGTCGCCTGCCCACGCTGCTCAAGGAGGGCGTGTCCAGCTGCG
TGCTGGACTGCGAGGCCGTCGCCTTCGACGCCGCCAACGGCAAGCTGCTGCCCTTCCAGG
TGCTGTCGAGCCGCAAGCGTGCGTGCGCGAGTGCGGAGGACGTGCGCGTGCCGGTCTGCG
TGTTCGTGTTCGACCTGCTGTACCTCAACGGCGCCCCGCTGGTGGGCAGCACGCTGGCGC
ACCGCCGCAAGCTGCTGCGGGAACACTTCCGCACCCAGCCCGGTACATGGCAGTTCGCCA
CGTCCAAAGACTGCAGCACTATCGAGGAAGTGCAGCTGTTCCTTGAAGAAGCTGTGAAAG
AAAGCTGCGAGGGACTCATGGTGAAGATGCTCACTGGTGACAATTCGAAATATGATATAG
CTAGGAGGTCACACAATTGGCTAAAGTTGAAGAAAGACTACTTGGAAGGCGTCGGAGACA
CGGTGGACGCTGTCATTATCGGAGCCTACCGCGGCAAGGGCAAGCGCGCCGGCGTCTACG
GAGGGTTCCTGGTCGCGTGCTACGACCCCGAGTCCGAGCAGTTCCAGTCGCTGTGCAAGC
TGGGGACCGGCTTCTCCGATGAGGACCTGCAGGCCTTGTCCGACATGCTGAAGGAACACA
TTATTGATTCTCCGAGAAACTACTACAACTACGACAGCTCCCACTCCGCCGACGTATGGA
CCAGCGCCGCCGTGGTGGTGGAGGTGCGCTGCGCAGACCTGTCCCTCTCGCCCGCGCACC
GCGCCGCCATCGCGCGCCTGCACCCGCACAAGGGCGTGTCACTCCGCTTCCCCAGGTTCG
TGCGGGTGCGGGAGGACAAGGCGGCGGAGCAGGCCACCACGGCGGCGCAGGTGGCGCAGC
TCTACCTGGCGCAGGACCAGATCAAGAACCAAGTCAAACAACCTGACGCCGCTCACGAAG
ACGACTTCTACTGAGCGCATCCAACTAACATGAACTGAGTTACTTCACATACCCCATTGT
GTCTGCTTAAATTAGATAATGTTTACAAAATAAAAGACTTATTTTGATGTTAAAAAAAAA
AA
(2702 bp)

- SilkBase 1999-2023 -