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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoASG_c27748_g1_i1
Scaffold_idBomo_Chr3
NCBI non-redundant
(nr)		probable_ATP-dependent_RNA_helicase_DDX46_isoform_X1_[Bombyx_mori]
Ontology
GO:0000166 F nucleotide binding
GO:0000398 P mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0004004 F RNA helicase activity
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0010468 P regulation of gene expression
GO:0010501 P RNA secondary structure unwinding
GO:0015030 C Cajal body
GO:0016020 C membrane
GO:0016607 C nuclear speck
GO:0016787 F hydrolase activity
GO:0044822 F RNA binding
Transcript
Level		FPKM:22.70 TPM:17.41
ORF EntryO_BomoASG12641_complete:A_BomoASG_c27748_g1_i1
Sequence
(Nucleotide)
GTAGAATCCGTGGATGCAAGCGAGCGCTTTGTGATTTTGTTATGCGTACTTTTATCTCAT
AGCAATCGAACCAAATTTCACAGCTCATTTTGTTTCAAGAATCTTTTATTAGTATTAAGT
AAGGCACCGTTGATTTAGGCATGAGAAAAATAAAACGTGTAAAAATCTCTTTATATTTGC
TTTAAAAAATGGTTAGGAGTGGGAGAGACCGTGATAGGGAAAGGGATCGACGTAGATCTC
GAAGTCGTTCTGACACACCGGATCGTAAACGAAGGAGGTCAAGATCAAGAAGTCGTGATC
GGGGCTCGAAATCTTCAAAGAGGAAGCGCAGTCGTAGCAGAGATCGTGACTCTAAACGAG
ACCGAAGCCGAGAACGGGATCGCAGTAGGGAAAGAGATCGTAGTCGTGAGCGAGATCGGG
ACAGAAAAAGTGATAAAAGAGATGATAAAAGAAATGGATCTAGTAAATCATCGAGAAAGA
AGTCACCGGAGAAGGAAAGGGAGAGATCAAAATCAAAGGAAAAGAGTAGCAAAGCTGATT
CTTCTGAATATAACCCGGGCTCTGTTGACAAGGAAGAAGAGCAAAACCGCTTGGAAGCTG
AAATGCAAAAACGTCGTGAACGCATAGAGAGATGGAGGGCTGAACGTAAACGTAAAGAAA
TCGAATCCGCTAAAAAAGAAGTTCAAAAAGGAAGCATTGTTACTAATATACAAATACCGA
CATCAAAGAAATGGTCACTTGAAGATGACTCTGGTGATGAAGCTTTGCCAGGTGAAGATG
CGGAAGGAAAAGAAAAAAACAATATAGGAGAAAAGAAAGAAGAAGAAGATGAAATTGATC
CTTTGGATGCGTACATGCAAGAAGTGCAACAAGAAGTGCGTAAAGTCAATCAAATGGACC
AAGCCAAAGGAATTATTAGTGTTCCAACAACAGGTGGCACTGGCATTGTAATTCTTACTG
GCACTGCCAAAAAAAAGGTCACTGAGCAGAAAAATAAGGGTGAACTGATAGAACAAAATC
AAGATGGCTTGGAGTATTCGTCTGAAGAAGAAACGGAAGACATAAAAGATGCCGCTGCAA
ATCTTGCTTCCAAACAGAGGAAAGACTTGATCAAAGTAGACCATGCTAGTTTAGACTACA
TGCAATTTAGGAAGTCATTTTACACAGAAGTGAATGAACTAGCAAGAATGACACCAGAGG
AAGTAGAAACGTACAGGACTGAGTTGGAAGGTATTCGTGTCAAGGGAAAAGGCTGTCCGA
AACCGATCAGGACATGGGCGCATTGCGGTATCAGTAAAAAAGAACTTGACATTCTAAAGA
AGTTGAATTTTGAAAAGCCCACCCCGATACAAGCACAAGCGATTCCTGCTATTATGTCTG
GAAGAGATCTAATAGGAATTGCGAAGACTGGTTCAGGCAAAACATTAGCGTTCATCCTGC
CAATGTTCCGGCACGTGTTGGACCAACCGGCGTTAGAAGATACAGACGGACCAATAGCCC
TCATAATGACTCCTACAAGGGAACTCTGCATGCAGATCGGCAAAGATATAAAGAAGTTTG
CAAAGTCACTCGGATTACGTGTGGTTTGCGTTTATGGGGGCACCGGGATATCGGAACAGA
TAGCTGAACTGAAGCGTGGTGCCGAAATGATAGTGTGCACCCCGGGACGCATGATCGACA
TGTTGGCCGCCAACTCTGGGCGCGTCACCAACCTGCGCCGCGTCACGTACGTCGTGCTCG
ACGAGGCCGACAGAATGTTTGACATGGGATTCGAACCACAGGTAATGAAAATCATAGACA
ACATAAGACCCGACAGGCAGACCGTGATGTTCAGCGCAACTTTCCCGAGACAGATGGAGG
CTCTCGCTCGTCGGATATTACAGAAGCCAATCGAAATACAGGTTGGTGGAAGAAGTGTGG
TCTGCAAGGATGTGGAACAGCACGTCGCTATACTAGAGGAAGAAGCTAAATTCTTCAAAC
TGCTGGAACTCCTCGGACTCTACAGTCAAATGGGAAGCATCATTGTCTTTGTGGACAAAC
AGGAGAACGCCGACAGTCTGTTAAAAGACCTCATGAAGGCCTCGTATTCTTGCATGAGCT
TACACGGAGGGATTGATCAATTCGACAGGGACTCGACGATAGTCGACTTCAAGAACGGCA
AGGTCAAGTTGCTGGTAGCGACCAGCGTTGCTGCCCGAGGGCTGGACGTCAAGCAACTAG
TTCTGGTGGTCAACTACGACTGCCCGAATCACTATGAAGATTATGTGCATAGATGTGGAC
GCACCGGGCGCGCCGGCAACAAAGGGTTTGCCTGGACCTTCCTCACTCCGGAGCAGGGTC
GGTACGCGGGCGACGTGCTCAGGGCCTTCGAGCTGGCCGGAGTCAGTCCTCCCGCCGAAC
TAAAGAACCTGTGGGAGAAGTACAAGGAGGCGCAGGAGAAGGACGGGAAGAAGGTGCACA
CGGGAGGCGGATTTAGTGGGAAAGGTTTCAAGTTTGACGAATCTGAAGCCCAGGCTGCTT
CGGAAAAGAAAAAGTACCAGAAGGCGGCTCTCGGCCTCCAGGACTCCGACGACGAGGACG
TGGAGGGAGATCTCGATCAACAAATCGAGACGATGCTCGCTGCCAAGAAGATTGTCAAGG
AAATTAAACCGGGCGTGGCCGTGTCCGGTCCCGCCGCGGCTGCTGCTAGCGCGACGGACG
GAAAGCTGGAGTTAGCGCGGCGGCTCGCGTCCCGCATCAACCTCGCCAAGGGACTCGGCG
CAGACCAGAAGGGCGCCACGCAACAAGCCGCCGAGGCGATCCTCAAGGGCGCGCCTTCGC
AGACACTCATCACGGCTAAAACAGTGGCGGAACAGCTGGCCGCGAAGTTGAACACGCGAC
TCAACTACCAGCCGCGAGACGACAACACAAACGAACCGACCGAGGAGGTGTTCCGCAAGT
ACGAGACCGAGCTGGAGATCAATGACTTCCCGCAGCAGGCCAGGTGGAGGGTCACTAGCA
AGGAGGCGCTAGCTCTAATCAGCGAGTACTCAGAGGCCGGTATAACGGTCCGCGGCACGT
ACGTCCAGCCGGGCAAGGCGCCGCCCGAGGGCGAACGCAAGCTGTACCTCGCCATAGAGA
GCTCGCAGGAGCTGGCCGTTGCCAAAGCCAAATCCGAGATAACGCGGCTCATCAAGGAAG
AGCTCCTCAAACTCCAGACCTCGGCCCATCACATGGTCAACAAAGCTAGATATAAAGTTT
TGTAGTTTATTATGGATTAAATGTTGGACAGATA
(3274 bp)

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