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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoASG_c27627_g1_i1
Scaffold_idBomo_Chr11
NCBI non-redundant
(nr)		RNA-binding_protein_40_[Bombyx_mori]
Ontology
GO:0000166 F nucleotide binding
GO:0000398 P mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005681 C spliceosomal complex
GO:0005689 C U12-type spliceosomal complex
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0030626 F U12 snRNA binding
GO:0032502 P developmental process
GO:0097157 F pre-mRNA intronic binding
Transcript
Level		FPKM:9.89 TPM:7.58
ORF EntryO_BomoASG12488_5prime_partial:A_BomoASG_c27627_g1_i1
Sequence
(Nucleotide)
TTAACATTGTCCATTTGCTTCTCAAACATAAGCCTTTTTACATTCAAGTATTGCATCTCA
TGAACAAAATGAGCCTTGATACGCCATTTAATTCAAATATTATAGCAATAAACACTTTCA
AAGAAATTTTCCGAGAATATCTTTTTGATATGGCAAATTCATATAAAAATGACTCTGAAT
CAGAACTGTCTAGTGATGAAATAATGGCTACAGATCAACATCCCGTGATCCCTGTTATGG
TGAGAAGAAAACACAAATTGCCTAAACCTTCAAGAAAAATTCCAGCTACTTTGCCACCAG
AAGCAAAAATGAAAAGAATTCCTATAAATCAAGAAGAAGTATTTGATATTACAGCTGTAC
AGGAGCCTAAGAAAATATGTGTTATGGTGTCTCAAGACAGTTTACAGAAACCAGTAGAAG
AACCTGAAGTCATCGGTGAAATTGGAAAATATGACAAAGAAGAAAAGCCTCAAAACATTG
AAGAGAGTATTTCTGAACCTGAACAACCTATAATAACCAGAAAAGAATTGTTAAAGAATC
GTCTATCTCATTATGACATGAAGATTCTGCCAGTATTTAAAAATTACCACCCGGGTCAAC
CATCGTTGAGGCTGTACATTAAAAATTTAGCCAAAAATGTGACCAGTGAAGATGTGGAGA
GGATTTATCGGCTATATGTTGTAGATCTCACTGAGGAAGAACGCCAAGGCTTTGATGTGA
GAGTCATGCAAGAGGGAAGGATGAAAGGTCAAGCATTTGTCACGTTTCCATCGGAGAGGA
TTGCACAAAAAGCACTCACAGAAACAAATGGTTTCATGTTGAAAGACAGACCTATGATTG
TACAGTTTGCTAGAGCAGCCAATAAACGAACTATAGAATAAATTTGGTACGAATATTTAA
ATTTAGTCTAACAATACACCAAGTGTA
(927 bp)

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