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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoASG_c27598_g1_i3
Scaffold_idBomo_Chr15
NCBI non-redundant
(nr)		X-linked_retinitis_pigmentosa_GTPase_regulator_homolog_isoform_X1_[Bombyx_mori]
Ontology
GO:0000079 P regulation of cyclin-dependent protein serine/threonine kinase activity
GO:0000209 P protein polyubiquitination
GO:0002376 P immune system process
GO:0004842 F ubiquitin-protein transferase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0016874 F ligase activity
GO:0032020 P ISG15-protein conjugation
GO:0032480 P negative regulation of type I interferon production
GO:0042296 F ISG15 transferase activity
GO:0042787 P ubiquitin-dependent protein catabolic process
GO:0044822 F RNA binding
GO:0045087 P innate immune response
GO:0048471 C perinuclear region of cytoplasm
GO:0050688 P regulation of defense response to virus
GO:0051607 P defense response to virus
Transcript
Level		FPKM:1.74 TPM:1.34
ORF EntryO_BomoASG12425_complete:A_BomoASG_c27598_g1_i3
Sequence
(Nucleotide)
CGTTGCAGGCTCAAATTTGTTTAATCAATGGTTCGATGATCTAGATTTTTTTTCAGAATT
TCGTAAAATGTCTAAATCTGAAGATCCAAATTTTGACTTTAGATTGGCTAATTTAATGCA
AATCAATTGGTCATATAATATATTTCAACTAAGAAAAAATCTTTATTTATTGGGCGCCTT
TGACGGTAGGAAAATCGCTAAGAAAATTGATATACCAGAAGAGTGCAGAAAATCGCCACT
CGTTGCCGGTAACGACTACAACTTGGTTATTGGCCACAATAATTCGAGTGCCCTTTGGAT
ATTGAATTTGGAAGATAATAGCATAAAGAATGTTTATTTGGATAGAGAATTGCCTCTTGA
ATTATCGCCCAAACGTAATAAAACAGATAATGAGATACAAAAGCTTGTTGTTAATAATTT
TTCATGCCTCTACCTTACTAAAGGCAAGAATGTTTATAGCGGAATACTTCCAAGTTACAT
AGATACAAGCCACTGTAATGGACATATTATTGATGTTGCTTGTGGTTATGAACATTACAT
GCTTCTCACTAGTACTGGTTATGTCTATACTTGGGGAGATGGCAGGTTTGGATAAGAACA
ATATTTATGTCTGTTTTTTTTTTCCTATTGTGTCAATTGGTGATCAAGATCACAATGTAC
CTGAGTCACTCGGTGTCAGGTGGCTGTTAAAATGTAAATTTTGTCACTGAACTTAAGACA
TGAAGTGGAACTTTCAATTGTATAGTATAATGACAGACCCAACCTAAAACTGACTGTGAC
AGAAATTGGTAGGAAAGTGGTACCTACCGATCAGGGGCTACAGACTACAGTATTACTGCC
ACTTGAAGCTAGCTTTACAAACTCGAATAAGTGACCAGTGTTAATAATAAAGAAATTCAA
ACTTTTTTAAGCATAAAACCATTGTGCCTTTTTATTGTACTCATAATAAAAAAAATGGAA
TTGTTAAATTAAAACATTTTACGATGATTTTTAGGAGATTGCAACTAGGTCAGGATGATA
CAAGCAATTTAGAGACACCCACACAGGTTGAAGCCCTGGCTGGAATAAAAATTATTAAAA
TAAAAGCAGGTGGGTGGCATTCCATGGCACTCAGTGAATTTGGGGATCTCTATGTTTGGG
GCTTGAATGACACTGGTCAATTAGGTATAAAGGAAAGTGAAAATGACTTAAAAAGCTATG
CTTTACCAAAGTTAGTTGATCTATATGATGATAATGAAGAAGTTCATCTCCAAATTAAGG
ACATAGCCTGTGGCTCGAAGCATTCTGTATTATTATTAGAAGATGGCTCAGTTTGGACCA
CTGGTGCAAATAAATATGGACAACTAGCATGCCCACAATATCCAAACTCAAAAAACTTCA
ATAAGGTCTGTGTAATCAAAGAAGCATGTAGACTGAAATGTGGACCATGGACAACTGTAG
TTGTATGCAATTAATGTATGTAAAGATACTTATGAAGCCCTTCAAAACTTTTGTTAAGTA
TATTATGTCCAACTATAATAGACTTGTCGATAGTAACACATTTACGTAAAAAAATATTGT
GTTG
(1564 bp)

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