SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoASG_c27482_g1_i1
Scaffold_idBomo_Chr10
NCBI non-redundant
(nr)		RNA-binding_protein_cabeza_isoform_X2_[Bombyx_mori]
Ontology
GO:0000166 F nucleotide binding
GO:0000398 P mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003729 F mRNA binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005669 C transcription factor TFIID complex
GO:0006367 P transcription initiation from RNA polymerase II promoter
GO:0008270 F zinc ion binding
GO:0008344 P adult locomotory behavior
GO:0008345 P larval locomotory behavior
GO:0035327 C euchromatin
GO:0045887 P positive regulation of synaptic assembly at neuromuscular junction
GO:0046872 F metal ion binding
GO:0048749 P compound eye development
GO:0051124 P synaptic assembly at neuromuscular junction
GO:0071013 C catalytic step 2 spliceosome
Transcript
Level		FPKM:55.10 TPM:42.26
ORF EntryO_BomoASG12249_complete:A_BomoASG_c27482_g1_i1
Sequence
(Nucleotide)
TTGTCGATGGTGTGCGTGGCGTTACTTTTCTATTAATTTCGCGATAATAATTATTGCGAC
AGTATACACGAGAATCATAGTAATTAGTGCTTAATCCGGCAAGAATATGGGTGATCGTGA
ATATAGTGGCGGTGGATACGCGTCGCAGTATTCGGTGCCTCCACCGGCATCAGCCGATAA
CAATAGTTATGGCGGTGGGCAAGGTGGCTATAACCAAGGCGGATACTCTGGGCAATCTCA
AAATCAAGAATGGAACCAACAAAGTTCAGGTGGTAATTCCTATGGAGGAAGTAATCAACA
AAGTAGTAACTATGGTCAGAGCTATGGAAGTGGTTATGATAGTGGCGGTGGCTATGAAAG
AAGTAATGATGGGTATAATTCGAGTGGAGGAGAGCGTGGCGGGAGCAATTATGGAGGCAG
TGATCGTGGTGGTTCTGGCTATGGCGGTGACAGAGGCGGCAGCGGCTATTCTGGAGGTGG
AGACCGTGGCGGGTATGGTGGAGGTGATCGTTCAAACAACTTCAGTAGAGATGGGGGAAA
TAGAGACGGTGGATATGGTGGCGGAGGCAGGGGGGGTGGTTTTAACAAAGGAGGCGGCGG
AAGCGGTGGATATGCCGACCGTGGTGGCGGTGGTGGTGGTGGCGGTGATATGGTAACTCA
AGAAGATACTGTCTTCGTTCAGGGAATGAATCCATCTACTACTGAAGAGGAGCTGTGCCA
ACATTTTGGAGCTATTGGTATAATCAAGACTGATAAAAAAACACAACGGCCGAAAGTATG
GATGTACAAAGACAAATCTACTGGCCAACCTAAAGGAGAAGCGACTGTAACTTACGAAGA
TTCCAATGCAGCTTCTTCTGCAATTCAATGGTTCGACGGCAAAGACTTTAATGGAGCAAC
TATTAAAGTTTCACTTGCCCAACGACAAAATACTTGGGGAGGTGGCAAAGGAGGCGGTGG
TGGCTTCAGAGGAGGACGAGGTGGAGGCGGCGGGGGAGGAGGTCGCGGTGGTGGTGGAGG
CAGAGGGGGTGGATCTCAAGGTTCTAACAACCGTGATGGAGACTGGAGATGTCCAAACCC
CAATTGTGGAAACACCAACTTTTCTTGGAGGAAGAATTGTAATAGATGTAATGAAGAGAA
ACCCGGCGGCGGTGGCGGTGGAGGTGCTCCAGGCGGAGGGCGAGGCGGCGGTCCTCCAAG
CCGTGGAGGCCGTGGCGGCGGTGGCGGGAGAGGTGGAGGAGGAGGAGGTGGCTGGGGTGG
CCGCGGGAGTGATCGAGGAGGTGGTGGACGCGGCGGTAGCAGAGACGGTGATCGTCGCAG
TTATGGAAGCAGTGGCGGTGGTGGAGGAAGGGACGGTGACCGCGGTAATGGTGGGGGCGC
TATGAGAGGAGACGGCGGCAGCAGAGACCGACAACGACCTTACTAAATATAATTTTAAGA
TTTAATCATAATGTTAATACTTCCTTCTGACTGAGATCTAAGTTTGTAAAAACGTTCAAT
CTAAACTTTCCATCATATTACAGTGTATATAAGATATCTTGAACACTTTAGATGCATTTC
AGACATGTATGCTTCTTACTGAATTAGAATTTACTTGAATTAAAAATGTAATCTTTCATT
AATAACTAGAAATACTAACAATTGATGCTTTTCACCCATTTTTTAAATTAACTATTGTAC
AATAGATTTTTTTTTAGTTTTTAGTGTGCTAAATATAAAATCTATATATTTATAGAGATC
GAGATTTATTTCTAATGTTGTCAATAACATGTCTCGCTTATCAAAGCAAAGGGAATCAAA
GTGATAGCCTCGTTATGATTGGTTAAAATATTGTACAAGTGTGTAGAGAATTAAAATTAA
AAAAATTAGAATGGAGATTTCTTAATATTCATTTATTAATAGGTGTAAAAACAAAATTAT
AAAATTTTTAG
(1931 bp)

- SilkBase 1999-2023 -