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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoASG_c27481_g2_i2
Scaffold_idBomo_Chr11
NCBI non-redundant
(nr)		cytoplasmic_polyadenylation_element-binding_protein_2_[Bombyx_mori]
Ontology
GO:0000166 F nucleotide binding
GO:0000900 F translation repressor activity, mRNA regulatory element binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003729 F mRNA binding
GO:0003730 F mRNA 3'-UTR binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006412 P translation
GO:0007141 P male meiosis I
GO:0007283 P spermatogenesis
GO:0007288 P sperm axoneme assembly
GO:0007291 P sperm individualization
GO:0007616 P long-term memory
GO:0008049 P male courtship behavior
GO:0008135 F translation factor activity, RNA binding
GO:0008356 P asymmetric cell division
GO:0017148 P negative regulation of translation
GO:0043022 F ribosome binding
GO:0043679 C axon terminus
GO:0044292 C dendrite terminus
GO:0044297 C cell body
GO:0045202 C synapse
GO:0048471 C perinuclear region of cytoplasm
GO:1990124 C messenger ribonucleoprotein complex
GO:2000766 P negative regulation of cytoplasmic translation
Transcript
Level		FPKM:18.78 TPM:14.41
ORF EntryO_BomoASG12246_complete:A_BomoASG_c27481_g2_i2
Sequence
(Nucleotide)
TTCCGATCTCTAGGCCGCCGCCACGGCCGGTCTTAGATGGGCGAGCTACAATATCCAGGC
GCTGCCAGCGTCACGGACGACGAGAGGCAATACCGCGCCCCGTTCAGGCGAGCGCCCCAG
TACAGGTGGCCAGCGCCCGCGCCCCCACAGCCCTCGGCCTTCGCCCCGTGGCGTAGAGCG
CCCGCTCCGCCGCGACCGCCCGACTACAGACGCAGTGCGTCTTACCCAGGAAAGCCTGAT
GAAGGATTCCAGGACCGAAGCGGCTTGGACAGTATGCGTTCATTAGAACACTATTTAACG
GACATCATGAGGGCGGACACGTCTGAAAATATGAAAAGCAAGTCGCCTTTCTTTCCCGGA
GTGGAGGAAGGTGCCGGTGCTGCCGGGGCGGGGTCGCCTGCCGTCTCCGGGGACCAAACG
CAGGATGTCGTGAACCGACTCAGCGCCGCCGGTCTTTCGATGTGCGTGAGTGCGCTCGGA
TCGCCGGCGCGATCGTCACCAGTGTCCGCCGGTTCTGAGCACGGCGAGCGATTTAGCCGT
AAAGTATTTGTCGGCGGATTGCCACCAGACATCGACGAAGACGAGATAACGTCTTCGTTT
CGTCGCTTCGGGCCGCTGGTGGTAGACTGGCCTCACAAGGCTGAGAGCAAAAGCTATTTT
CCGCCCAAGGGTTACGCTTTTCTGCTGTTTCAAGATGAAAGTTCGGTGGCTGCTTTGATG
GAAGCGTGCATCACCGACGAGGACAAGCTGTACCTGTGTGTGTCGTCACCGACCATCCGC
GACAAGCCGGTCCAGATCCGACCGTGGCGGCTGGCGGACGCTGACTTCGTACTGGACGCA
AGCATGCCGCTCGACCCGAGGAAGACCGTCTTCGTGGGAGGTGTTCCGCGTCCACTTAAA
GCCGTCGAGCTTGCGATGATCATGGACCGGCTGTACGGTGGAGTTTGCTATGCCGGAATC
GACACTGACCCGGAACTCAAATACCCGAAGGGCGCCGGACGGGTTGCGTTTTCGAACCAG
CAGTCATACATAGCGGCCATCTCGGCGCGGTTCGTGCAGCTGCAGCACGGCGACATTGAC
AAGCGCGTCGAGGTGAAGCCGTACGTGTTGGACGACCAGATGTGTGACGAGTGCGCCGGA
GCGCGGTGCGGCTCGAAGTTTGCGCCGTTCTTTTGCGCCAACGTCACTTGTCTACAGTAT
TATTGCGAGCACTGCTGGGCGACGATTCACTCTCGGCCCGGGCGCGAGTTCCACAAGCCG
CTGGTGAAGGAGGGCGCCGACCGACCGCGCGCCGTGCCCTTTCGCTGGTGTTAACAATCT
ACGGCGACGACGACTACCGACGGACAACAGACAGCCGAGTCTGCGTATGTAACTTGACGT
TCTATAGCTTGACGATTGACTGGTGCCAGCCATAGCGACTAACCTTTCGTCGCTGGCAAC
AACATCTGGGTCTCTATGTAAATGACTGTGTTTTTGTTTTTCTATGATTTGCCAACTGTC
TCGCCGCTTGGCATAATTGTCGGCGTCCGAACTGTAAATTGCCAACGTCTGTGCGGGGAT
GCTGCAAAGATGTCGGCAATCGGTGAGACTTGGCCGAGAAGGTCTTGTTTGAGAAATTGC
GAACAAAACACATTTGTGTCCAATAAACGAAATTTAACGTTCAATTAGAAATGCTTTAAC
GTTTATCATAAATAAAAAGCAGCACGTGTTTTTTTAAATATTGCCTTTAAGTGGCCGGCG
TCGATAATTTTTCAAACAAGACCTCTGAATTTTTTTTCAACAGACAATACCGTGAAACTA
CGATTTTAGTAGAAAATTTAAAAACTCCGCAACATTATCACGGACGTGACTCGCGAATTA
CGGATTAGTATCGAGATGTTTCTAAATTTTGGACGCTTGTGGTTTTCGCGTCTAGAATGC
TGCATTATTTACTACTAATAATTATTAATGTTAAGCAAAATATATAGATTCAAGTACAAT
AATTACTACCATTTTTTCCTATAAACTCGCTTTCGACATTAAGGCAACCAAGTTTAGTCG
ATTACGGTACAGTTGCTATTTTCGTGAGCGGGTTTGTTGAAAATGGTTTTCTTATATAAG
CAGAATGTAACCTGAATTAGCTAGCATCTGTCCGTTTGTTGTTTGCGGCGACGTATATTG
CGCGCGGTCGCATTTTAGATTACGTGGCCGTGCACTCGTTTAGATATTAAACGTTGAGAG
ACGATTGGTCTTGATTTCTTGAAGGTTTCTCCATTAAGAGCACCGCAGGAGGAATTGGGC
TCGAATTTGGATGAGCAATAGTCTATTCCACGAGCAGTAGGTGCGTTCTCCTTTGGGTGC
TCTATGAGGAAATCACAAAGTAAAACTGTACCTGTGTAGCTAGTATAAATTCTTGTGTTT
TTTTAAAAATTAGTTTTCGTTCGGTATTGTCGACTGGGAGTCGAACGTTGGTGCGTTCTC
GAATATTCTGTGGTTGTTGTTTGTTGTCTTTTTCCTTTCGTGTTACTACTGCGTTTGATG
TATACTGGTTATTTGTGTTGATTGATTTGAGAATATGCCTTGCCGTTTTCATGGTTAAGT
TTTGTATTGTAAAAAGGTTGTAAAGGCTATTATGGTAACGGGTTTCGATGATTTTTTTTG
TTTTGATGGATTCTTGATTTTATGGCATTGTTCTAAGCGCTATGATGACGGGTAGACTCT
TGCCACGAATCTGGAATGTTCGGAATCCACTAAAACTGACAATCACGGTAAGATCCCGAT
AAAATCGATAAGTGCAAGGAATATAATATTGTAAATCAGCCCTTTCTAAATATGACTCAC
AATTTTGTTCCTTGGACGTGTTGTAATAATTTGTGCTGTCAAAATAGTTGCTGAGAAATT
TGATAGATTTTGGTGATTTAATCCTGGTAATTTATAAAAAAATCGTATAGACATTTCTCA
GTCGATCAACGCGAATAAACTACAGTTGTTTGATCGTGTTTTTTTCGTTCTAAAGAAATG
ACTCAAGTTGATCAATTTTCGATGATTTGCTTTTCGAATTAAAAGTAAACTACACATTAA
AAAACAAATTAATACTATCTTTTTGAGTAAATTTGAGTAAAGCCTTTGACGAAACGCGCG
ATCAAACTTGATAATGACTTTTGTTGTCTCTTGTCATCCTGGGAGGCGTTTAGTGGAGGG
GGAGGAGTGTTAGTACAAAATGGAGGCACGTTATGACGACGAGGCTGATTCACTTGGTTT
TTTGGGTACTTTAATTTGGTAATTTTTATATCTCGTCGTCAAAAACGAGTCTTAGTCCTT
TTTGAAGAGTTACCAATAATTGGGCTGTAGATTTTTTATGTATGTAGCGTATTTTAATAT
AATATATATATATATATTTAACCAAATGAAATATATTTTCGATTCGCCGGGATAGTGCAA
TGGACTAGTAGGTTTTGAAAATTTAGTGTAAAAAATCGTTTTTTTTTTTTGTACGTGTAA
AACTGTTGCTAAACATTTTGAACGGCAACGACACTTGGGATTTGTAGCCCGCACGTGGCC
TCTGTGTTGCAACACCATTAATTGTAATTTTTATCTTTACATTTATACGTCAATCAAATT
GAGAAGCAATATATTTATTTAGGCCTTAGTGTGTTAGTTAATTTGAGAGGCGCTCGTGCA
TGTCGTGGCGTTAGTGAATTTGACTTTAGACTTTAAAATTATATAAATAATGTTTAATGA
TTCCGTAGACTAAAGACTAAGACTAAAACATAAATTAAAAACAATAGAAGGCAAAATTAG
GCAATCCGGGCGCTAACAGAAATCGACATGATTACTTCAGTGCACCGCGTAAAACACCGG
TGACCTACAAGGCAGTCAATGTGTTAATGATGTGTAGTTAATTTTTATTTGGCAACATTT
TATATGCACATAAAATGTAATTTAAAAATTGTGTGTGTATTTAGATTATTTTTATTTTCC
TTGTTTTTTGATGTGAGTTAGTGGTAATTTTGGCGATTTGCAGCGCGTTTTGATGCAGCG
ATTAGGACGCTCATTAGCTGTGCCCGGTTCGGTTGGGAATAATTCTGAAACTGTAGAATA
ATTGGCATTGAAGAACTAGGCTAGGGGTGTTTTCGTCGCGAATGAGAAGGGTCGCAGATC
GCCTTGAGATGACGAATATTTTTCTATATTTTTAAATTAGAGGACCAATTATACTTTGCG
GGGGGATGCTTCTGTATTCGTAGCGCCCGCGAGAACTCGTTGAATTTGGTGATTCACTTC
AGTTTGATGAGTTATCTACTTTCTAAATGTTTCATGTGCGTTTTGGGTACGCCACGTTGA
ATCGGCCAAACAAAATCTAGGCATGATGTTTGTAGTTTAAAAACAATCATTTTTTCTCCA
CTAGTAAGCGGTGTGGCCTGCGCGCTTGTGTGATATGCCCCGGCCGCTTGCCTGTATCGT
CAAGTTGTACTTAATATCCGTCGGACTGTATCCCTGAATCACCACGGATATTGTAGACTG
TAGTTAAAAAGACTAGCGATTTTTGGATGGTTTTTTCTTTAGAATGTTACTGTAGTTTCC
TCGTGTCTTGGGCTCTATGCTTAAAGCGTGCCTTTCGTCTGTCCGTTTGTTGATGTTACC
CCTCCTGAATCGGTTTAGTTTTGGGCACAAGAGCTCTTGCGCAGCTCTGCGTGATGACCT
GCGAAATGTTAGGTTTTTCACTTTCCTGGTAATTCTTTGAATCGACTGGTCACGTATTAC
CAAGCTCGTGAACTAAATCTTAAACTCTCGATGTCATCGATTTTTCTTTTTGAGTTCCGT
GCTGAGCGCCACCAATGTTCGGGATTGTTGATCGACCGTTACAAATTTTATTAGAATATT
TATTGTTTTTTTACCTCTATGTAGTTACAAAATAGAGGTAAAAAACAATATAATATATTC
TAATAAAGTTTGTTACAAAAATCTGTCTGGTTACAAAAAATAGGCATATATTTTTGAAAC
GATACGTGATTTTCGGATTAAAGAAACAATTTTTTCTAAAGTTTAAGTAGGTGCAATTGT
ATTTATTAGAGAGGGCATTTTAGTGAAATTTTCATTGACGAAGTCGCAC
(5089 bp)

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