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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoASG_c27481_g2_i1
Scaffold_idBomo_Chr11
NCBI non-redundant
(nr)		PREDICTED:_probable_RNA-binding_protein_orb2_isoform_X4_[Plutella_xylostella]
Ontology
GO:0000166 F nucleotide binding
GO:0000900 F translation repressor activity, mRNA regulatory element binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003729 F mRNA binding
GO:0003730 F mRNA 3'-UTR binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006412 P translation
GO:0007141 P male meiosis I
GO:0007283 P spermatogenesis
GO:0007288 P sperm axoneme assembly
GO:0007291 P sperm individualization
GO:0007616 P long-term memory
GO:0008049 P male courtship behavior
GO:0008135 F translation factor activity, RNA binding
GO:0008356 P asymmetric cell division
GO:0017148 P negative regulation of translation
GO:0043022 F ribosome binding
GO:0043679 C axon terminus
GO:0044292 C dendrite terminus
GO:0044297 C cell body
GO:0045202 C synapse
GO:0048471 C perinuclear region of cytoplasm
GO:1990124 C messenger ribonucleoprotein complex
GO:2000766 P negative regulation of cytoplasmic translation
Transcript
Level		FPKM:5.05 TPM:3.87
ORF EntryO_BomoASG12245_complete:A_BomoASG_c27481_g2_i1
Sequence
(Nucleotide)
GCACGAACGGTTTGACTTTAGTACTGAGTGCGGAAATTTAATTTAGTCGTATTTTCTGGT
GTTTCGGTGCTGTCAGTTTTCTTCTGATTTTTGTCAGTAAGTGTTCAAAAGTGGGTGGAG
GTGGTTGCTTATTTCGGTTAAAACTAAAGTGTCCGGTCGTTTATAATAGAAACAAGTAAA
AAAAAATCAAAACTAAAATCCTGGAGTGCAGTGACCTGTGTTTTTTTGTTGTGTATGTGG
AAAAATGTGAATTATTAACTAACGCGATAAGTGTCAAGATTATGTTTCTCGTGCTGTGAA
CGAATTCTCGCGGCTTTAGAATGATTAACGAACATTTTGTGAGCAGCATGACGTACTACG
GCAAGTCGCCTTTCTTTCCCGGAGTGGAGGAAGGTGCCGGTGCTGCCGGGGCGGGGTCGC
CTGCCGTCTCCGGGGACCAAACGCAGGATGTCGTGAACCGACTCAGCGCCGCCGGTCTTT
CGATGTGCGTGAGTGCGCTCGGATCGCCGGCGCGATCGTCACCAGTGTCCGCCGGTTCTG
AGCACGGCGAGCGATTTAGCCGTAAAGTATTTGTCGGCGGATTGCCACCAGACATCGACG
AAGACGAGATAACGTCTTCGTTTCGTCGCTTCGGGCCGCTGGTGGTAGACTGGCCTCACA
AGGCTGAGAGCAAAAGCTATTTTCCGCCCAAGGGTTACGCTTTTCTGCTGTTTCAAGATG
AAAGTTCGGTGGCTGCTTTGATGGAAGCGTGCATCACCGACGAGGACAAGCTGTACCTGT
GTGTGTCGTCACCGACCATCCGCGACAAGCCGGTCCAGATCCGACCGTGGCGGCTGGCGG
ACGCTGACTTCGTACTGGACGCAAGCATGCCGCTCGACCCGAGGAAGACCGTCTTCGTGG
GAGGTGTTCCGCGTCCACTTAAAGCCGTCGAGCTTGCGATGATCATGGACCGGCTGTACG
GTGGAGTTTGCTATGCCGGAATCGACACTGACCCGGAACTCAAATACCCGAAGGGCGCCG
GACGGGTTGCGTTTTCGAACCAGCAGTCATACATAGCGGCCATCTCGGCGCGGTTCGTGC
AGCTGCAGCACGGCGACATTGACAAGCGCGTCGAGGTGAAGCCGTACGTGTTGGACGACC
AGATGTGTGACGAGTGCGCCGGAGCGCGGTGCGGCTCGAAGTTTGCGCCGTTCTTTTGCG
CCAACGTCACTTGTCTACAGTATTATTGCGAGCACTGCTGGGCGACGATTCACTCTCGGC
CCGGGCGCGAGTTCCACAAGCCGCTGGTGAAGGAGGGCGCCGACCGACCGCGCGCCGTGC
CCTTTCGCTGGTGTTAACAATCTACGGCGACGACGACTACCGACGGACAACAGACAGCCG
AGTCTGCGTATGTAACTTGACGTTCTATAGCTTGACGATTGACTGGTGCCAGCCATAGCG
ACTAACCTTTCGTCGCTGGCAACAACATCTGGGTCTCTATGTAAATGACTGTGTTTTTGT
TTTTCTATGATTTGCCAACTGTCTCGCCGCTTGGCATAATTGTCGGCGTCCGAACTGTAA
ATTGCCAACGTCTGTGCGGGGATGCTGCAAAGATGTCGGCAATCGGTGAGACTTGGCCGA
GAAGGTCTTGTTTGAGAAATTGCGAACAAAACACATTTGTGTCCAATAAACGAAATTTAA
CGTTCAATTAGAAATGCTTTAACGTTTATCATAAATAAAAAGCAGCACGTGTTTTTTTAA
ATATTGCCTTTAAGTGGCCGGCGTCGATAATTTTTCAAACAAGACCTCTGAATTTTTTTT
CAACAGACAATACCGTGAAACTACGATTTTAGTAGAAAATTTAAAAACTCCGCAACATTA
TCACGGACGTGACTCGCGAATTACGGATTAGTATCGAGATGTTTCTAAATTTTGGACGCT
TGTGGTTTTCGCGTCTAGAATGCTGCATTATTTACTACTAATAATTATTAATGTTAAGCA
AAATATATAGATTCAAGTACAATAATTACTACCATTTTTTCCTATAAACTCGCTTTCGAC
ATTAAGGCAACCAAGTTTAGTCGATTACGGTACAGTTGCTATTTTCGTGAGCGGGTTTGT
TGAAAATGGTTTTCTTATATAAGCAGAATGTAACCTGAATTAGCTAGCATCTGTCCGTTT
GTTGTTTGCGGCGACGTATATTGCGCGCGGTCGCATTTTAGATTACGTGGCCGTGCACTC
GTTTAGATATTAAACGTTGAGAGACGATTGGTCTTGATTTCTTGAAGGTTTCTCCATTAA
GAGCACCGCAGGAGGAATTGGGCTCGAATTTGGATGAGCAATAGTCTATTCCACGAGCAG
TAGGTGCGTTCTCCTTTGGGTGCTCTATGAGGAAATCACAAAGTAAAACTGTACCTGTGT
AGCTAGTATAAATTCTTGTGTTTTTTTAAAAATTAGTTTTCGTTCGGTATTGTCGACTGG
GAGTCGAACGTTGGTGCGTTCTCGAATATTCTGTGGTTGTTGTTTGTTGTCTTTTTCCTT
TCGTGTTACTACTGCGTTTGATGTATACTGGTTATTTGTGTTGATTGATTTGAGAATATG
CCTTGCCGTTTTCATGGTTAAGTTTTGTATTGTAAAAAGGTTGTAAAGGCTATTATGGTA
ACGGGTTTCGATGATTTTTTTTGTTTTGATGGATTCTTGATTTTATGGCATTGTTCTAAG
CGCTATGATGACGGGTAGACTCTTGCCACGAATCTGGAATGTTCGGAATCCACTAAAACT
GACAATCACGGTAAGATCCCGATAAAATCGATAAGTGCAAGGAATATAATATTGTAAATC
AGCCCTTTCTAAATATGACTCACAATTTTGTTCCTTGGACGTGTTGTAATAATTTGTGCT
GTCAAAATAGTTGCTGAGAAATTTGATAGATTTTGGTGATTTAATCCTGGTAATTTATAA
AAAAATCGTATAGACATTTCTCAGTCGATCAACGCGAATAAACTACAGTTGTTTGATCGT
GTTTTTTTCGTTCTAAAGAAATGACTCAAGTTGATCAATTTTCGATGATTTGCTTTTCGA
ATTAAAAGTAAACTACACATTAAAAAACAAATTAATACTATCTTTTTGAGTAAATTTGAG
TAAAGCCTTTGACGAAACGCGCGATCAAACTTGATAATGACTTTTGTTGTCTCTTGTCAT
CCTGGGAGGCGTTTAGTGGAGGGGGAGGAGTGTTAGTACAAAATGGAGGCACGTTATGAC
GACGAGGCTGATTCACTTGGTTTTTTGGGTACTTTAATTTGGTAATTTTTATATCTCGTC
GTCAAAAACGAGTCTTAGTCCTTTTTGAAGAGTTACCAATAATTGGGCTGTAGATTTTTT
ATGTATGTAGCGTATTTTAATATAATATATATATATATATTTAACCAAATGAAATATATT
TTCGATTCGCCGGGATAGTGCAATGGACTAGTAGGTTTTGAAAATTTAGTGTAAAAAATC
GTTTTTTTTTTTTGTACGTGTAAAACTGTTGCTAAACATTTTGAACGGCAACGACACTTG
GGATTTGTAGCCCGCACGTGGCCTCTGTGTTGCAACACCATTAATTGTAATTTTTATCTT
TACATTTATACGTCAATCAAATTGAGAAGCAATATATTTATTTAGGCCTTAGTGTGTTAG
TTAATTTGAGAGGCGCTCGTGCATGTCGTGGCGTTAGTGAATTTGACTTTAGACTTTAAA
ATTATATAAATAATGTTTAATGATTCCGTAGACTAAAGACTAAGACTAAAACATAAATTA
AAAACAATAGAAGGCAAAATTAGGCAATCCGGGCGCTAACAGAAATCGACATGATTACTT
CAGTGCACCGCGTAAAACACCGGTGACCTACAAGGCAGTCAATGTGTTAATGATGTGTAG
TTAATTTTTATTTGGCAACATTTTATATGCACATAAAATGTAATTTAAAAATTGTGTGTG
TATTTAGATTATTTTTATTTTCCTTGTTTTTTGATGTGAGTTAGTGGTAATTTTGGCGAT
TTGCAGCGCGTTTTGATGCAGCGATTAGGACGCTCATTAGCTGTGCCCGGTTCGGTTGGG
AATAATTCTGAAACTGTAGAATAATTGGCATTGAAGAACTAGGCTAGGGGTGTTTTCGTC
GCGAATGAGAAGGGTCGCAGATCGCCTTGAGATGACGAATATTTTTCTATATTTTTAAAT
TAGAGGACCAATTATACTTTGCGGGGGGATGCTTCTGTATTCGTAGCGCCCGCGAGAACT
CGTTGAATTTGGTGATTCACTTCAGTTTGATGAGTTATCTACTTTCTAAATGTTTCATGT
GCGTTTTGGGTACGCCACGTTGAATCGGCCAAACAAAATCTAGGCATGATGTTTGTAGTT
TAAAAACAATCATTTTTTCTCCACTAGTAAGCGGTGTGGCCTGCGCGCTTGTGTGATATG
CCCCGGCCGCTTGCCTGTATCGTCAAGTTGTACTTAATATCCGTCGGACTGTATCCCTGA
ATCACCACGGATATTGTAGACTGTAGTTAAAAAGACTAGCGATTTTTGGATGGTTTTTTC
TTTAGAATGTTACTGTAGTTTCCTCGTGTCTTGGGCTCTATGCTTAAAGCGTGCCTTTCG
TCTGTCCGTTTGTTGATGTTACCCCTCCTGAATCGGTTTAGTTTTGGGCACAAGAGCTCT
TGCGCAGCTCTGCGTGATGACCTGCGAAATGTTAGGTTTTTCACTTTCCTGGTAATTCTT
TGAATCGACTGGTCACGTATTACCAAGCTCGTGAACTAAATCTTAAACTCTCGATGTCAT
CGATTTTTCTTTTTGAGTTCCGTGCTGAGCGCCACCAATGTTCGGGATTGTTGATCGACC
GTTACAAATTTTATTAGAATATTTATTGTTTTTTTACCTCTATGTAGTTACAAAATAGAG
GTAAAAAACAATATAATATATTCTAATAAAGTTTGTTACAAAAATCTGTCTGGTTACAAA
AAATAGGCATATATTTTTGAAACGATACGTGATTTTCGGATTAAAGAAACAATTTTTTCT
AAAGTTTAAGTAGGTGCAATTGTATTTATTAGAGAGGGCATTTTAGTGAAATTTTCATTG
ACGAAGTCGCAC
(5112 bp)

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