SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoASG_c27441_g1_i1
Scaffold_idBomo_Chr16
NCBI non-redundant
(nr)		vacuolar_protein_sorting-associated_protein_33A-like_[Bombyx_mori]
Ontology
GO:0005515 F protein binding
GO:0005764 C lysosome
GO:0005765 C lysosomal membrane
GO:0005768 C endosome
GO:0005769 C early endosome
GO:0005776 C autophagosome
GO:0006810 P transport
GO:0006904 P vesicle docking involved in exocytosis
GO:0008150 P biological_process
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016023 C cytoplasmic vesicle
GO:0016192 P vesicle-mediated transport
GO:0030136 C clathrin-coated vesicle
GO:0031410 C cytoplasmic vesicle
GO:0031902 C late endosome membrane
GO:0032403 F protein-containing complex binding
Transcript
Level		FPKM:2.38 TPM:1.83
ORF EntryO_BomoASG12169_complete:A_BomoASG_c27441_g1_i1
Sequence
(Nucleotide)
GTTACGTCCCAAATGATAAAGTGACGGGTTTACTCATAAGAAAATTACATAGAAGGTGAC
ACAAGTTGCATATACAATGCTGCACAGGCACTAAGAACCATCCAACAGTTTTATGGAATT
GTGCCTCGTGTATTCGGGAAAGGCCAAGCAGCTAAACAGGTTTGGGATCTATTGTGCAGA
TTGAATAAAGAGGAGCAAGGTTCCGGGAATAAGGGTGCACCGACATCATGCATCGATCAG
TTACTCTTATTGGACCGAGCCGTTGACTTTACAAGTGTAATGGCGACCCAACTCACCTAT
GAGGGGCTTATTGACGAAATCTACCGCATAAAGAGCGGTACGGCCACGTTTCCGGGACAA
AAGTTCGTGGGTCCGGACGATCCTAACCCAGAAGAGACAGCCCGTGAGAAGAAACACGTC
ATACTCAACTCCAGCGAAGAACTGTTTGCAGAAATACGCGACTCTGACTTTACCGAGATA
GGAGCAGCATTATCGAAAAAGGCTCGCATAATTAAAACACAACTAGATGAGCGCCACAAA
GACAAATCCGTGCAAGAGATCAAGCATTTTGTTTCCCGCCTACCGCAGCTGCTGGCCAAC
AAGCAGTCCCTGGTCACTCACACCGCCATCGCTGAGTACATCAAAGAGAAAACTGACAGC
TTCGATTTTCATGACAAAATACAATGCGAAGAAGACTTTCTGAATTGTATCGACAGCGAA
AAGATTTGTCCGTATATTGAAGACCTGATTGCACAGAAGGAACCTCTTACCAAGGTTCTG
CGCTTGATTTGCCTACAATGCGCAACCGGGTCTGGCTTGAAGCCGAAAATTCTGGAATAT
TACAAGAGGGAACTCGTGCAAACGTACGGTCTGAAGACCTGGCTAAGTATCTGCAACTTG
GAGAAGTGCGGCCTGCTCAAAACACAACAAGGAACCCGTCAATATACTGTACTCAGAAAG
GCCTTACATCTGACGACTGACGATTCCGATGCAAATGACAAAGACAAAAGTTATTTGTCG
AGTAAATATACACCGTTAACAGTGAGACTGAGCGAGCATATCGCCAAGAATAAAGGATGG
AGCGGTATCCAAGACGTATTAGGCCTCCTGCCGGGCCCTACAGTGGACGAGCTACAAACC
CTACAACCTCGTATGACACGTCGCCATTCCGGTTCCAGTGAGAATTCATCATCAATAGAA
AACCCACGGGTCGTGCTCGTATTCTTCATTGGAGGCTGTACGTACCACGAGATCTCAGTG
CTCAGGACGATCAGCCAGCAGGAAGATTCGGTTGTGGAATTTGTTATCTTAACCACTAAA
ATAATCAATGGAACCACATTCATAGAATCTTTAATGGAACTCGATTGAGCCAAAAATTGG
TGTATCCTTAACATAGGATATAATAATATATTAATATACATTCTGTCATATTAAAAAGAA
ATAGACTGAATCATATTTTTATTCAATTATGAAATAATGTCATGAATTTATTTTTATGAC
ATAATAGTGTTCCAAATAAAAACAAGCCCAAATAGTATAGATGTCAAATTATATCCCTTT
TATATGTAATTATGTCAAAAAATATATGAAATAAATTAGTTGCAAACGTAAAATAAATTT
TCAATACACAAAGCATGAAACATATAATATTAACTGATAAATGTA
(1665 bp)

- SilkBase 1999-2023 -