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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoASG_c27385_g3_i1
Scaffold_idBomo_Chr11
NCBI non-redundant
(nr)		LOW_QUALITY_PROTEIN:_low-density_lipoprotein_receptor-related_protein_2_[Bombyx_mori]
Ontology
GO:0004872 F signaling receptor activity
GO:0005509 F calcium ion binding
GO:0005515 F protein binding
GO:0005615 C extracellular space
GO:0005737 C cytoplasm
GO:0005768 C endosome
GO:0005886 C plasma membrane
GO:0005903 C brush border
GO:0005905 C clathrin-coated pit
GO:0006766 P vitamin metabolic process
GO:0006897 P endocytosis
GO:0006898 P receptor-mediated endocytosis
GO:0007568 P aging
GO:0010165 P response to X-ray
GO:0010951 P negative regulation of endopeptidase activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016197 P endosomal transport
GO:0016324 C apical plasma membrane
GO:0017124 F SH3 domain binding
GO:0020028 P endocytic hemoglobin import into cell
GO:0030165 F PDZ domain binding
GO:0030492 F hemoglobin binding
GO:0031100 P animal organ regeneration
GO:0031526 C brush border membrane
GO:0032403 F protein-containing complex binding
GO:0032526 P response to retinoic acid
GO:0033280 P response to vitamin D
GO:0042493 P response to xenobiotic stimulus
GO:0042562 F hormone binding
GO:0042953 P lipoprotein transport
GO:0042954 F obsolete lipoprotein transporter activity
GO:0043234 C protein-containing complex
GO:0045056 P transcytosis
GO:0045121 C membrane raft
GO:0046872 F metal ion binding
GO:0046879 P hormone secretion
GO:0050750 F low-density lipoprotein particle receptor binding
Transcript
Level		FPKM:41.71 TPM:31.99
ORF EntryO_BomoASG12056_complete:A_BomoASG_c27385_g3_i1
Sequence
(Nucleotide)
TGCGACTCCGAGAACGACTGCGGAGACGGCTCGGACGAAGGGCCACACTGTGCCGAGAAA
ACTTGCGCATATTTCCAGTACACGTGTCCTCGGACCGGGCACTGCATCCCGGCCTCGTGG
GTGTGCGACGGTGACGACGACTGCTTCGACAAGCAGGACGAGGCGGACTGCCCTCCGGTC
TCGTGCCTCCCCAACCAGTTCAAGTGCGCCGATCTCAAGCAGTGTGTGCTGGAGGTGTAC
AAGTGCGACGGCATCCCCGACTGCAACGACGGCAGCGACGAGCTGGGCTGCCCGTCGCTG
GCGCCGCACCAGTGCCAGCCCGGGAAACAGTTCCAGTGCCGCTCCTCTGGGATCTGCATA
CCCTCCACTTGGCATTGTGACGGTACGCCGGACTGCGAGGACCTCTCCGACGAGCCGGCC
TCCTGCGGCACGGTGGAGTGCGCCCCCAACTACTTCCGCTGCGACAACGGACGATGCATC
TTCAAGACGTACGTCTGCGACGGAAATGATGATTGCCAGGATGGGTCTGATGAAGGACTC
CAACATGCTTGCAAAGCGCCGCCTTTCCGCTGTCCATCCGATCAATGGGAATGTCCTCAA
GCATCAGGCCGCTGCATCAATTTCACTCAAGTGTGCGATGACAAATTGGATTGTCCGGGT
GGCACCGATGAAGGTCCGGTGTGCTCGGAGAAGCAATGCTCGTGGCGCGGGGCCCAGTGC
TCGCACGGGTGCCACGAGACGCCGGGCGGCGCGCAGTGCGTGTGTCCGCGCGGCCTGCAG
CTGACCCCGGGCGAGCCCGACGCCGCCACGTGCTCCGACCTGAACGAGTGCGAGCCGCCC
GGCGTCTGCTCGCAGCTGTGCACCAACACGAAGGGCTCGTACGCGTGCGGCTGCGTGGCC
GGCTACCGACTGGCACTCGACGCGCACTCCTGCAAAGCGGACAACCATTCCGGCGCCTTC
CTAATAATCTCCAACCGCCACTCGATCCTGGTAGCCGACCTCGACGAGCAAGGCCTCGAG
CGGGTGCCCATCGACGTTGAGAACGTGGTCGCCACCGCCTCCGACATGCACACGGGTACC
ATTTTCTGGTCCGACATGAAGCTGAAAAAGATCTCCCGCCTGGACCGCGGCGGCGAGCCG
AAAGTTATCGTCTCAACGGGACTTGATCTAGTCGAGGGACTCGCGTACGATTGGGTCGGC
GGCAACGTGTACTGGCTGGACAGCAAACTGAACACCATCGAGGTTGCGAAAGAGGACGGA
GCGGCTCGGACGACTCTGCTGAGCGGTAACATCACGCAGCCGAGAGGGATGTGTCTCGAC
CCGGCTCCGGACGCGAGGTGGCTGTTCTGGACCGACTGGGGCGAGCATCCCAGAGTCGAA
CGGATCGGCATGGACGGGACCCGACGAATGGCGATCATTACTACTAAAATATACTGGCCA
AACGGCCTCACGCTCGACACGGCCACGAAGAGGGTCTACTTCGCTGATTCCAAATTAGAC
TTCATAGATTTCTGCAACTACGACGGCACGGGTCGCCAGCAAGTGTTGTCGGGCAGCCAT
TACTTGCTGCATCCCCACTCACTCACACTCTTCGAGGACACGCTGTACTGGACCGACCGT
CAGTTGAACCGAGTGCTGTCGGCGCACAAATTCAAGGGTTCGAACCAGACGGTGGTGTCG
CACCTCATCTCGCAGCCGCTGTCCATCCACGTGCACCACCCCTCGCTGCAGCAGCAGTAC
ACGTCGCCCTGCAAGCGCGACACGTGCCAGCATCTGTGTCTCCTGAGTCCCAACCAGACG
GTCGGCTACACGTGTATGTGTCAACCGGGGTATAAGCTCTTGCAGGATGGAAAATGTGCA
GACGAAGAAACAGCCTATTTGATGGTACTGAAGGGCACTCAAGTCATCGACCTCTCCACT
GACGGCTCAGGAAGAGCTGGACAACTGTCGCCGGTGGTTGGTATACAAGGTGGTATCCAA
TTGGACTACGACCGTCAAGGACACACGCTGTACTGGCTCCAGTCCATCTCAGGAGACAGT
GAGGATGATGAAAACTGCACCATATACACTATGCCATACGGTGGTGGCAATAAGGCTGAA
TTTTTAGGCCGAGACACCGGCATTGTTGGTGCACCATCTTCGATTGCTTTCGATTGGATT
GGAAGGAACTTATACATTGCAAATAGAGTTGCCAGTAATATCGAGTTGATCAAAGTAGAC
GGCAAAGTTAAGTACAGAACCATCGTGATGGCAAACGATGGTGGTAAGATGTCCGTGGCA
AAACCCAGAGCTTTGGCACTTGATCCTACAGAAGGTAAAATGTACTGGTCTGATGAAGGT
GGTTACGGAGTTCCCCCAAAAATTGGGAAAGCAAACATGGACGGCACCAATTCTATCATT
TTGGTAGATACTATTGAAAGACCGGAGGCCATCACCATCGACATTGAGAGAAAGATTGTC
TATTTCAGCACTCAGTACCCCGCCACCGTCATCAGTGTAAACACAGATGGAAATGACAGA
AAAACTATACTCGACGAATCAAATGGTATCTCGTATCCAAAAGTGATCGCTGTACTTGAC
TTGAGGCTGTACATACTTGATCCGAGACACGAGAAGATCATCCAAGCCGATCTCCCCAAC
GGAGACAACATCAAAACGATTATTGACAATGAAAGTGATTTGAAATCTTTTACAATTTTC
CAAAAAAGGAAGATGATTCATCATCCTTGTTCTCAGAGCAACGGAGGCTGCGAACAGATC
TGTATTCCAGGTGACGACAGCGTGTCTCGGGTGTGTGCTTGTTCTATCGGCTACAGAAAA
GAGAACGAGATTCATTGTGTTCCTTATAAGACGTTCGCAGTAGTCTCTCAGCTAGATTTA
ATCCGAGGGTACAGCCTCGATACTAGCGCAGAAGCGATGGTACCCATTACCGGTTCTGGA
CATCATATCCTACACGTAGACGTTCATTTCGCCGAAAATTATATTTACTGGGTCGAGTTC
AACAGAGGTCAGTGGAACGGAGTTTTCAGGATACGTCCAAATGGTACAGAACTGCAACAC
ATCATTAAGGATGGAATCGGAAGCAATGGCATTAGAGGCTTAGCCGTCGATTGGGTTGCA
GGTAATCTATACTTCACAAATGTATTTCCGCACGAAAGCTACGTGGAAATGTGCTGGTTG
GACGGTTCGAACCGAAAAGTCCTCGTGAAAACAACAATGGACGCCCCAAGGGAATTAGCC
GTTAACCCGATATACCGGTTTTTGTACTGGATCGATTACGGGCAATACCCTCGCATTGGC
CGAGCGTATCTCGATGGGAGTCAATGGAATACATTAGTCAGTTCCGGGATATCGAATCCT
CGAGATTTGACCATCGACATGTTGACTCATGATGTGTACTGGGTAGATTCTAAATTAGAC
CAAATTCAAAAGATTTCGTACAGCGGCGGCAACAGACAGGTGATCAGATCAAATTTACCC
AACCCGATGGGCATAGCGGTCCACACAGGTAGCGTCTACTGGGTCGACAGAAACTTACAA
ACTATTTACAAATCGTCTAAACTGCCCGGAAATATGTCGATGCCAGAAAAAGTTCGAACC
AACTTAGGAAAGTTACGTGATATAGTAATATTTGATGTCAACAACCAACCGACCGATGAG
AGCAATCCCTGCAGAAAGTTTGGAAATGGTGGCTGCGAACAACTATGCTTCAGCTTCCCG
CCAGACAACGGCGTCACAATGCGATGTGACTGTGCCACGGGACAGGTATCAGCCACAAAT
CCGACTAAATGTGATGTTGTAGATGAATACCTAGTCTTTACGACTAGAACGGAAATTCGA
GCTGTCAACCTTGATCCGAAGTCTACCGGCGTACCGTTCAAACCCGTAGTCAATTTGACC
AACGTCGTCGGAGTCGAGTTCGACTACGCTGACAACAAATTATTTTTTACACAAATCAGA
CCGTGGGCGAGAATCGGTTGGATGTCTGCTAATAATCCAAGTTCTGCTGCCATCCAGAAT
ATTATAAACAAAGGTATCAATCCTGAAGGCATCTCGTATGATTGGACTCAGCGGAAAGTT
TACTGGACCGACAGCTCTAATAACTCCATCTATGCCATGAACTTGGATGGTTCCGAACTA
GTTATGATAGCCCGAGTTGAAAGACCTAGAGCCATCGTGGTCGACCCATGTAATGGCACG
TTATATTACACGGATTGGGGAAGATTTGGAACTTCAGGTAAAATATACCGAACGACAATG
GCAGGCTCATTGAAGAAAGCTATTATCGACAAAGATTTATCACAACCCAGCGGCTTAACT
ATCGACTTCGATGAAAACATATTGTATTGGACTGATGCAGTACGAGAAAAAATTGAAAGA
TCGAAACTTGACGGCAGCGACAGAGAAGTACTAATCTCGGCAACGATCTATCCATTCGCC
ATTACCGTCTTCGGTAATTATATTTACTGGACCGACCTTCAACTGCGAGGAGTTTATCGT
GCCGAGAAACATACGGGAGCCAATATGATCGAGATGGTAAAACGACTAGAGGACTCCCCA
CGAGACATTCACGTCTACAGCCCGAAAAGACAGAAGTGTCAAGTGAATCTTTGCAAGATC
AGCAACGGAGGTTGCGCCCATAGTTGTCATCCAGCACCCAATAATACGGTCGAATGCAGA
TGTGACGAAAACACAAAATTAGTGAATGAAGGTCGCATGTGCGTGGCTAAGAACATCACC
TGTGACTCGTACAAATTTTTCTGTGGTAACGGAAAGTGCATCAGTAGGATGTGGTCTTGC
GACGGGGATGATGACTGCGGTGACAACTCTGACGAAGATAAGAACTACTGCGCATACCAT
TCTTGTTCACCAAATGAGTTCCGCTGTAATAACGGACGTTGCATATTTAAATCTTGGAAA
TGCGATCACGAAAATGACTGTAAGGACGGCTCTGACGAAGAAGGTTGCGTCTTCCCGCCG
TGCGCTGATGGCGAATTTACTTGCCTCAATTCTCGCTGTATTCCCATGTCACAAGTCTGT
AACGGCATCAACGACTGCAAGGATAATGTGACCAGCGACGAGACGCAAGAGCGCTGTCCT
ACGAACACAACATGTCCCACTAACCACTTGAAGTGCGAGAAGACAAACATCTGCGTCGAA
CCGTACTGGCTGTGTGATGGAGACA
(5185 bp)

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