SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoASG_c27348_g1_i2
Scaffold_idBomo_Chr11
NCBI non-redundant
(nr)		splicing_factor_3B_subunit_3_isoform_X2_[Bombyx_mori]
Ontology
GO:0000398 P mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005681 C spliceosomal complex
GO:0005689 C U12-type spliceosomal complex
GO:0005730 C nucleolus
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0042177 P negative regulation of protein catabolic process
GO:0071013 C catalytic step 2 spliceosome
Transcript
Level		FPKM:2.58 TPM:1.98
ORF EntryO_BomoASG11964_complete:A_BomoASG_c27348_g1_i2
Sequence
(Nucleotide)
GGTCCGTGAAAACGAAGCTCAATGGCGTGCTCTGAATCCGCCATTTTACCGGCAACTGCT
TGTGCCGGTTCACCCGTGAAAATTAAATACTGCATCGAGCCGCATTGCGGCCATCAATTG
CTAATATTTAAAGGGATAGGTTAAAATAAGATCACGATGTATCTCTACAATTTAACACTG
CAAGGTTCATCTGCCATAACACATGCCGTACATGGAAATTTCTCTGGAACTAAGCAACAG
GAGATTATTATATCACGTGGCAAAACACTTGAATTGTTACGGCCAGATCCGAACACGGGA
AAGGTCCACACATTAATGAAAATTGAAATATTTGGTGTAGTTCGGTCTATTATGGCTTTT
CGTCTAACCGGAGGAACAAAAGATTACATTGTGGTTGGTTCTGATTCTGGACGTATCATC
ATTTTGGAGTACATCCCAACTAAGAACATTTTGGAGAAAGTCCATCAAGAAACATTTGGT
AAATCTGGCTGTAGGAGAATAGTTCCTGGTCAATATCTATCAATTGATCCTAAAGGAAGA
GCTGTTATGATTGGTGCAATTGAAAAACAGAAATTGGTATACATTTTGAATAGAGATGCA
GAAGCTCGACTAACAATATCTTCACCACTTGAAGCTCACAAGTCAAACACACTAGTTTAT
CACATGGTTGGTGTTGATGTTGGATTTGAAAATCCCATGTTTGCATGTTTGGAAATTGAT
TATGAAGAAGCTGATTCAGATCCTACCGGCGAAGCTGCACAAAAAACTCAACAGACTTTA
ACATTTTACGAATTAGATCTTGGTTTGAATCATGTTGTTAGAAAGTACTCTGAACCTTTA
GAAGAGCATGCAAACTTTCTCATAACTGTGCCTGGAGGAAATGATGGTCCTTCTGGTGTC
CTTATATGCTCTGAAAATTATCTCACATACAAAAATTTGGGTGATCAACATGATATTAGG
TGTCCTATACCTCGCAGAAGAAATGATTTAGATGATCCAGAAAGAGGAATGATCTTTGTT
TGTTCTGCCACGCATAAAACTAAGTCCATGTTTTTCTTTTTGGCACAAACTGAACAGGGT
GATATTTTCAAAATAACTATAGAAACTGATGAAGATATGGTCACTGAAATAAAGCTGAAA
TACTTTGACACTGTACCAGTGGCAACATCAATGTGTGTTCTTAAAACTGGATTTTTGTTT
GTGGCTTGTGAATTTGGCAACCACTACTTATATCAGATAGCACATTTGGGTGATGAAGAT
GATGAACCAGAATTTAGCTCTGCTATGCCTCTAGAAGAGGGCGACACATTCTTTTTTGCA
CCAAGACCTTTGAGGAATTTAGTACTGGTAGATGAAATGGATTCTTTGTCACCAATATTA
GCTTGCCATGTGGCAGATTTAGCTGGGGAAGATACTCCGCAAGTTTACTTGGCATGTGGG
AGAGGCCCACGATCCTCCCTTAGAGCACTAAGACATGGTCTTGAAGTTGCTGAAATGGCT
GTATCAGAGCTTCCAGGATCACCGAATGCTGTTTGGACAGTTCGACGAAATAAAGATGAA
TCTACTAACGGCAGGTGAACAGACATGGTTCAGCATGACGAACAGAGAGATCGGAAGAGC
GT
(1622 bp)

- SilkBase 1999-2023 -