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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoASG_c27343_g1_i3
Scaffold_idBomo_Chr9
NCBI non-redundant
(nr)		geranylgeranyl_pyrophosphate_synthase_isoform_X1_[Bombyx_mori]
Ontology
GO:0004161 F dimethylallyltranstransferase activity
GO:0004311 F farnesyltranstransferase activity
GO:0004337 F geranyltranstransferase activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006695 P cholesterol biosynthetic process
GO:0006720 P isoprenoid metabolic process
GO:0008299 P isoprenoid biosynthetic process
GO:0016740 F transferase activity
GO:0033384 P geranyl diphosphate biosynthetic process
GO:0033386 P geranylgeranyl diphosphate biosynthetic process
GO:0045337 P farnesyl diphosphate biosynthetic process
GO:0046872 F metal ion binding
Transcript
Level		FPKM:21.71 TPM:16.65
ORF EntryO_BomoASG11957_5prime_partial:A_BomoASG_c27343_g1_i3
Sequence
(Nucleotide)
GTTTTTCACGGCGAGGTAAATATCTTGAAGCGGAAAATCAATACACTGAATATCATTTTT
TAGTGTTATATATTTTCATCAATAGATCTACAACAATGTCGCAAGCTATCACAAGAAGTG
GTGATAAAAATCAAGATGAGAAAATTCTCATGCCTTACACATACATTCAGCAAGTACCAG
GGAAACAGATAAGAACGAAGCTAGCTTCCGCATTCAACTACTGGCTCAAGATATCTGAAG
AGAAACTGAGACTAGTCGGTGATATTGTACAAATGCTACACAATGCCAGTTTATTGATCG
ACGACATTCAAGACAACAGCATCTTACGGCGCGGAATACCGGTAGCCCACTCCATCTATG
GTGTCGCGAGCACCATCAACGCTGCGAACTATGCTATGATCATAGCCCTCGAGAAGACTT
TGGAGCTTGGCCATCCATTGGCAACGACTGTATACACCGAACAGCTGTTGGAATTGCATC
GAGGTCAGGGCATGGAGATTTACTGGCGGGACAACTTCCAGTGTCCCTCTGAAGACGAAT
ACAAACAGATGACCATCAAAAAAACCGGTGGACTGTTCATGCTAGCGATACGACTGATGC
AGTTGTTTAGCGAGAACAAATCGGACTTCACCAATCTGTCCGCCGTGTTGGGGCTGTATT
TCCAGATCCGCGACGATTACTGCAACCTGTCGATGAGGGAGTACACAGAGAATAAGAGTT
ACTGCGAGGACCTCACGGAGGGGAAGTTCAGCTTCCCCATCATACACGCCATCAGGAGTC
AGGAGGACGACAAACAAGTCCTTCATATCCTCCGCCAAAGGACACGGGACGTTGAAGTGA
AACGTTACTGCATCACGTTGTTGGAGAAGTTGGGCAGCTTCCGGTACACGAGGGGGATCC
TGAACGATCTGGACGCGCGCGCCAGGGAGGAGGTGTCCCGTCTAGGCGGCAACCCACAGC
TGGAGGCGCTGCTGGACGACCTGCTCACCTGGAGACAGGAAGGCGACGACGCTAACGATC
AAATGAACTACGTTTGAGCGCAACTAAAGATGAGCTTAATTTATTATAAATATAAATTAT
TCCAAATACAAATAGTGAGGGTAGTTGAATTTGTTCCTTAAATTTTAGCGAAACTTTTGC
TAGTGTTATAAAACAGAAATATATATCGAGAAGTGAAGGGTTATTTGGTATAAGGGACAT
CTTTGAAAAATTACTGGTGGTAGGACCTCTGGTGAGTCCGCGCGGGTAGGTACCA
(1255 bp)

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