SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoASG_c27275_g1_i1
Scaffold_idBomo_Chr4
NCBI non-redundant
(nr)		cyclic_nucleotide-gated_cation_channel_beta-1_isoform_X2_[Bombyx_mori]
Ontology
GO:0000166 F nucleotide binding
GO:0001750 C photoreceptor outer segment
GO:0005216 F ion channel activity
GO:0005221 F intracellular cyclic nucleotide activated cation channel activity
GO:0005222 F intracellular cAMP-activated cation channel activity
GO:0005223 F intracellular cGMP-activated cation channel activity
GO:0005249 F voltage-gated potassium channel activity
GO:0005515 F protein binding
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006812 P cation transport
GO:0007601 P visual perception
GO:0009187 P cyclic nucleotide metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030553 F cGMP binding
GO:0042391 P regulation of membrane potential
GO:0050896 P response to stimulus
GO:0055085 P transmembrane transport
GO:0071805 P potassium ion transmembrane transport
GO:0098655 P cation transmembrane transport
GO:1902495 C transmembrane transporter complex
Transcript
Level		FPKM:3.93 TPM:3.02
ORF EntryO_BomoASG11842_complete:A_BomoASG_c27275_g1_i1
Sequence
(Nucleotide)
CAGGCCGGGCGTGTTTGCACGCGGAAAATTCCGATACACGAATTTTACCTCGACATGTTA
ATTTTCCCGCGTCTGTTTACGTGCTGCGTAAATATTTAGGTGGCAAAATATGAACAATGA
ATGTGAGATGTTTTGAAAGAATAAAATGGAGGTAACAGTCGATGTGCACACAGTTCATCC
TTCAACATCAGACCGTGATGCTAAATATGGAACTAAGACCCCATTGGCCCGTGGGCCGTA
TGGTTCTTGGTGTACGCCAGAGACCTCGCCCATTCATCACCCGTTGACGCAAACAAACTC
GAACATCGAAACAAAAACTCAGCTTCAAGATCAGAAACGGTTTCTAGAAGCGAACAGTAC
TGTCTTCCCGCTGCAGAAAGTCAGACTTTTCTCTACAAGCCCTCCTCCAGACTATATTTC
GAGCATAGAAGATAAAAAGGCCATAACTGAACTCAAAGAGCTAAAAAAAAACTACATCAC
CAAAACAACTTCTGGTGATAAACCACCGCCAATTCAAGAGGAACCGGATTGCGAACCGGA
GTATCCGCAGAGTCCTATACCAGCCTCCCCGACGCGGTACACGAAATGTAAGGGATTCCT
TCTATCCACATTTTGCGATCCGTACATGCCAATCGATCCTCAAGGTCGTCTCTACATAGG
ATGGCTCTGTCTAGTAACATTCTGCTACAGTTACAATGCTTGGGGGATAGCTCTACGCTC
TACATTCCCTTACCAAACACCAGAAAATACGCCCATGTGGTTGGCAGCCGACTATTTCAG
TGATCTAGTGTATCTGTTGGATGTCGCATTCGTGAAGCCAAGGTTGATGTACTTACACGA
AGGGTTCTGGGTCGATGACCCCGTCGAAACCAGGAAAAATTATAAAAGGAAGGTTCAATA
CAAGTTCGATGTCATCTCGCTCACACCCCTGGACGTGCTATATTTCTATTTCGGCACGCA
GAAAGCGATCCTCCGGTTCCCGAGGTTGCTAAAGCTGCAAACGTTTTGGGAATTCAATCA
GGCGATGGATCGAGTGCTTGCCTCGCCCTACGTTGTCCGTATAGGCAAGACATTGTGCTA
CATATTCTACTTGATCCACTTGAACGCGTGCGCGTATTACGCGATGAGCGACCACATCGG
GCTCGGTTCGAACGGTTGGGTTTACGACAACGAAGGCATCGCCTACATCAGATGCTTCTA
CTTTGCAACTAAAACGGCCACGTCCATCGGGAAGAATCCGAAGCCGGAGAACACGATCGA
GTACCTGTACATGACCGCGGCCTGGCTGATGGGCGTGTTCGTGTTCGCTCTGCTCATAGG
CCAGATCCGGGACATCATCGCGACCGCAACAAGGGCCAGGACAGAGTACCGCAAGGCGCT
GGACGGGTGCGCGCGCTACCTGCGGCGACTCAACCTGCCGGCCGCGCTGCAGCGCCGCGT
CACGCTCTGGTTCAACTACACCTGGAGTCAGCAGCGATGCTTCGACGAGGCCAAAATACT
GAACTGGCTTCCGTCGAACATGAAGCGGGACGTGGCGTTGGCCGTGCACATGTCCACGCT
CAGCAAGGTGCAATTGTTTCGTGACTGCTCGGACTCTCTACTCCGCGACTTGGTGCTCCA
GCTGAGACCCGTATCGTTCCTGCCCGGGGACCTGGTCGTGAGGAGCGGAGACGTGGGGCA
CCAGATGTACATCATCAAGACCGGAGAGTGCTGTGTAATGTCCCAGGACGAGACCGAAGT
GCTGGCGACGTTAAGGGAAGGATCCGTCTTTGGAGAAATCAGTTTATTGGGCATCGAGGG
ACTGCGACGGCGGACGGCCACAGTTCGGTCGCGTGGATATTCGTCCCTGTTCGCGCTCTC
CCGTAGCGACTTGGACGCAGCTTTAGAGTACCACAAAGAAGCAGCCAAGGTTCTCCGCAT
AAGGGCGGATCAAATCATCAGGGAGAATGCAGCAAGACAAACCAAACAGAGGCTCGCTGC
GTTGGAAGCCAGGAAATCCGCTGAACTAGCGAAAAGACAGGAATCGGCACAGATCGGAAG
AGCGTC
(2046 bp)

- SilkBase 1999-2023 -