SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoASG_c27247_g1_i4
Scaffold_idBomo_Chr16
NCBI non-redundant
(nr)		FancJ-like_protein_[Bombyx_mori]
Ontology
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003678 F DNA helicase activity
GO:0004003 F DNA helicase activity
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0006139 P nucleobase-containing compound metabolic process
GO:0006281 P DNA repair
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0006974 P cellular response to DNA damage stimulus
GO:0008026 F helicase activity
GO:0016787 F hydrolase activity
GO:0016818 F hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides
GO:0031965 C nuclear membrane
GO:0032508 P DNA duplex unwinding
GO:0046872 F metal ion binding
GO:0051536 F iron-sulfur cluster binding
GO:0051539 F 4 iron, 4 sulfur cluster binding
Transcript
Level		FPKM:0.61 TPM:0.46
ORF EntryO_BomoASG11818_complete:A_BomoASG_c27247_g1_i4
Sequence
(Nucleotide)
CCCGGCCTTCGACATCGAGGACTTGGTCGAAGCCGGAGCGAAACTGAAGGCCTGCCCTTA
CTTCGCTGCCAAGAGCATGGCCGCAAAAGCAAAAATCATCTTCTGTCCTTACAACTATCT
GATCAACCCTTTCATTAGGGAGCGGATGAGGATCAATTTAGCAGACAACATAGTCGTTAT
AGACGAAGGGCACAACATCGAAGACATCTGCAGAGACGAGGCCACCTGCACCATCGAGAG
GAGACGGATATCTGAAGCTGTTGATCAACTGCAGTACGCCAAGAGGTACGTTAAGATGGG
CCAGGATGAGGCTGCAAGAGGGGAAACAATAGATTTTTTCATCAAGACATTACAAATATG
GGATAAGTGTCTAATAGAACAATCCGATCGCGTATCGCGCGAGAACACCGACATGTGGAA
CATGAACGAGTTCATGGCTATGCTAAATGAAAATGGCATCGGACAAAACAATTATCATAA
TTTCAATTTTCATTTATCGAAGCTGTTACGTATGCAAGATGATTTGTACGGTGTGGGACA
ACACACGATCGCCTTGTTGGAAACAATGGACTCCGCTCTCGGGTACCTTTTCAAGGACGA
ATGTAAACACGCCGAAGACTTCGTGCCGATGTTGCTGAAGGGTGACGACTCGCGCGCGCT
CTATCGGCGACGGTCGTATACCGGCGAGTTCAAAGGTGCGAACATATCGATACGTCTTCT
ATGCATGAGTCCGGCGGTGCTGTTCGAGGGTCTGACGAAGGCTAGATCTATAATACTGGC
CTCCGGTACACTGTCGCCCGTGGGCAGCATGAAGCACGAGCTCGGCGCCGAGTTCAACGT
GTCGTGTTTGAACCACGTCATCTCTAGAGAACGGGTATGGATAGGAACGTTAAGAAACTG
CGAGAGCTCGGAACAATTGAAATGTACGAAGGATAATATGGAGAAGAAACAAGTACAGGA
TTCCATAGGGAAGGCTATATTGAGGGTGTGTGACGTCACGCCCCATGGAGTGCTGTGCTT
TCATTCCTCGTACACATCCATGAGGTTGCTACATCAAAGATGGCAACAAACTGGCTTGTG
GGACAAATTGAATAGCCTAAAATATATATTTAAGGAGAGCGACAATACGACTGATCATGA
CGAAATTATGAAGGAGTACTACAGCGCCGCGGAGGTGGATCGAGGCGCGATCCTGTTCGC
CGTGTACAGGGGGAAGGTCTCCGAGGGCATGGACTTCAGGGACCGGCAAGCCAGGGCCGT
TGTGACGATCGGCGTGCCCTTCCCAACGATCGGAGACAAGATGGTCACGGAGAAAATGAA
ATACAACGACAAGCATTCGAATGGGAAGAAGTTAATGCGCGGCTGGGACTGGTACAACGT
GCAAGCCTTCAGAGCCATGAACCAAGCCATAGGACGTTGCGTGAGGCACCTCAACGACTG
GGGCGCCGTTCTGATGATCGACGAGAGAATCGCAGAACAAAGGAATCTTGAATATCTATC
TAAATGGGTGCGAGACTTCGTAAGTAAAGCAAAACTTTATATGTTACGAATAAATTATAT
TAACGTGGCACAGAAATTTCTCACAATACAAACATTGAAACAGTTTTATACGGGGTGCAT
TAGATCCTTTGCCGAATGCAAATAAAAGTTTCGAAGAAAAAAAAACGGCTTTTTGTAGTG
AAACTTCTTTAAGCGCGTTG
(1700 bp)

- SilkBase 1999-2023 -