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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoASG_c27129_g1_i2
Scaffold_idBomo_Chr21
NCBI non-redundant
(nr)		LOW_QUALITY_PROTEIN:_centrosome-associated_zinc_finger_protein_CP190_[Bombyx_mori]
Ontology
GO:0003677 F DNA binding
GO:0003682 F chromatin binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0005700 C polytene chromosome
GO:0005704 C polytene chromosome band
GO:0005737 C cytoplasm
GO:0005813 C centrosome
GO:0005856 C cytoskeleton
GO:0005874 C microtubule
GO:0005875 C microtubule associated complex
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007017 P microtubule-based process
GO:0008017 F microtubule binding
GO:0010468 P regulation of gene expression
GO:0016568 P chromatin organization
GO:0031208 F POZ domain binding
GO:0031937 P obsolete positive regulation of chromatin silencing
GO:0035191 P nuclear axial expansion
GO:0043035 F chromatin insulator sequence binding
GO:0046872 F metal ion binding
GO:0051493 P regulation of cytoskeleton organization
GO:0090202 P obsolete gene looping
Transcript
Level		FPKM:12.58 TPM:9.65
ORF EntryO_BomoASG11655_complete:A_BomoASG_c27129_g1_i2
Sequence
(Nucleotide)
GCCATCTTACGTATTCGCTGTCAACTTCGGTCAAATTTAGTGAAGTAAAACTGTGTAGAG
TCGTGTTGAAGTCAAGTAATTGAAATACAAACTACGATATTTTGATTTTCACTCGATGAG
ATATATATACTGCAAATATAACCTATAATGAAAAAACATTGAAACCGCCGCTATGTCGGA
GTTAAGGCAAGTGAAAGTGGATAACTGGGGAATTTATTTCCTCCAAAGGTTAAAACATTT
CTTTAACCGCACTGACTATTGTGATTTAACGCTACAATTCCAAGACAACGCACAGTTGAA
AGTCCACAGACTGGTTTTAAATGCTTGTACAGAATATTTTGAAGTTTTGGAGAGAACATG
CGAAATGTATGAAGATTGTCTCGTGATGCCGGACGATCTTCAGGCTGATGTCGTTGTACC
TATAGTGAACTTCATGTACACTGGACAATTAGAGTTCAGGTTGGATTTACTTGAGAAACT
TTACCAAACTTCTCTCATTATGAAAATGCCTGTGCTAACTAAACTTCTGAAAGCTCACCG
TGCCAGTCAGAATCCACAGTGCTATGCTCCAAAACATAAAAGCTCTGAACCTACTCCATC
TACTAGTAATAAACGCTCATATGGTAAAGCTTTTGACAACAAGAGTGCATGCAAAGAGAA
AAAAGTATATAAACCTGTGAATATAAATAAAGAAATAATGTACCGTCCATCATCTCCTTA
TATACAAAATAAAAAAAATCTAATGACAGATCCAAAACCTACAAGATATGAGCTATCAGA
AGAGTTTGATGGTGATGGGGTGTTTGACAGTTCCTTCTGTAACATATCCTATACATCTCA
ACCGTTGATGGTACATCCTGACACTAAGAAGCGTTACTCTAAAAAAAGTGGTCTGTTCAA
TAATTCTTCAAGTGATAGTAAACACACAACAACTTTAGACATTATAGAATGTAAGAAAAG
TGTTGATAACATCTTTGAAGATAATTACTTGGAGAGTGGTATACTTGATGAAAATGAGAT
GTTCCAAACAACATATTTAAAGAAGAATAAACCAATTATGGACTCCAATCAACTCTTTGA
TCAGATTTTAGATCAGAATGATGCTCCTAAAATAACAATAGACACTAAAAACAGTAAAGT
ATCTGCAAATCTTGATCATGCTAAAATAATAAGTGAAGTTTTAAAGAAATACTCTCATTT
ATTGAAAGGTAGTAAAAATATCAAATTGAAAATATTAAACACTCCAAACAAAAAGAAGCA
ATCCACTGTTCGTGAACAGAAAAATTCTCAGCAGAAAGTTGAAAGACATGATTCTAACTT
CACCTATGAGACTGATGTCATAGATTCAAAGCATGCAGCTAAGTTAATAGCAATGGGGGC
AGAGAACATTAATGGACCTTGGATATGCCTTATATGTGGAACACCAGGCAAAGCATTGCA
TTTTATGTCATATTATAAATTCCGAAGACATCTAGTTGAAGTGCACAATGAAAAACCAGT
AGTCAATATATGTGAATATTGTGGATATAAGGCATTAAAAAGAAATTATCATCTTTACCA
TCTATATACAAAACATGGGATTGAGCCACCACCAACATATAATTTCCCAAAATGTAATCA
ATGTAATTATGTAGCTATGGGTGAAGGATATTTAATGAAACATAAGTTAACACATTCAAC
TGTGAGCTTTCAGTGTAATGTTTGTGCTACACACTTTAGTTCATCAAATTTACTTCTCCA
GCACATTCAAAGGACAGGTCACAAATATTCTGCTGATAGAAAACACAACCTTCAATGTAT
GTATTGCCTAAAAGTCTTCTTACGTGAAAGCAGCCTATATAATCATCTGAAAACATGTCA
CAAAAAAGAGGATAAATCGAGTGGCATCATTGATGACTCAGATGAAGAAAAATCAAAAGA
TAAAAAACCTAAATTGGAGTTAGAGATTGAGATTCCCCCAGTTCGTTCACATGACTATGA
AGAAGTTAATGTACACTATCAAATTCAACCAGACGGAAATATCCATGTTATTCCTAATGG
TGAAATAAAAGCACCTTTAAATCAGAAGCATAAAATACTTAATCCTGAATTCAACTTAGT
TAAACCCAAACAAATATACAAAGAAAACAGTAACATAATTAACAATGTTACTACGTCTCT
GCAAAAAGGTCATGTTCAAGAAGACAATAGTAATGTTATTACAAATGAAGAAATTGTTAT
GATAGATGACAGAGAGTACATCCTGAAAGATAATCAGCTTATACCAAGATCAACCAAAAA
TGCTGAACCAGAATTCATCATCCCAGAAATGTTGCATTCAGAACCAGTGCAACAAACATC
TACCTCTACAACTCAGTTAGACTATACAAATTTAATAGAAACTGTAAATGAATCTAATGT
CATCCTGAGTAAGCAAACAAACTTAAATCAACCCATCCAGTTTGTTGTTTCTAATGAAGA
AGAATATAAAGCATTAATGACTGCAAACCATCCAATTCTTTTTGATAATGGTGATTCTAA
CAAAACGTTAGCTGTTTTATCCAACCCCCACACCTCCAATGTAGAATCAACGAGTATGGA
ACTTGACAACACTCAGTCAAATGATATAATGATCATACAAGAAAATTACCCATTAAATGT
AACAGAGTCAGTTGTAACGGACAATTCAAACATAGTAGTAGTTTATAGCCATCCTGTTGA
TAGCACAAACAAACAATTCCAAATTCTGACTACACAAGGAATAGGAACACAGTTAATACA
ATCATCAGCTATAATTACGCAAAACTTCGAGACTGTCACTACTACTGCACCGGTCATGAA
TGCTCACGTAATTGAGAGTCAAGAATGGGAAAATGACATAACTCCAATGCCTGTTAGTAA
CAAACCAAATGCTGACTTAGAAAAAACTGGACAAAATACACCTCAAATGACATCTCATCA
AAGTGTAATTGTTTCGCCTGAGGTTCAAGTCCCCCCTAAACCACCTTCACCAGTAGATAT
GGATGTAGAAGAAACCATACAAAGTAAATTAATAAATGAGCCAATTCAGGAAAATAATGA
AAAATGCACACAAAGTGAGACATTGCCGGCTACAACAATTACACCCATTACAGATTCAAG
CAATCCTACTCAAGGGACGATAGTGGAAAACATGATCATCAATGAACAGCTTACAGAAGA
ATCAAGTGAAAATCTTCCTACAGTTGAAGAAAATCTAGAGAATATTGATAAAAATTCAAC
TAAATCAAAACTTATTCTAGATTGTAATACTAAAATGGGATTAAATGATATCAGCGAAAA
CCTCATAGACAAAGAAGAGAATATTTGTAGTCCAACATTTACACAACAAACAGATTTAAG
TTTAGAAAATAATGTTGATTCTATAAGTCAAGATTCAGCTGAGGAAATTGTACAATGTGA
AGTATCACTGTCTGCGCAAGCAGTACCAAAAGCAGCTGAGGAAAAAATTCAAATATTGAC
ATCAGAATGGTCAGAAGATGAGTACGATTCTCCACCAGCAATCAATGATAATAAAGTAAT
TTGTGAAGACTCTAAAGAGATATTAACAAAATCAACTGAAACGCCTCAAAATATTGAAGA
GGGAACTGTGAACACTGAGTCTCTCTTACCTGAAAATTTAAATGAGCCAACTGAATCTGC
AAAACCTGAGAGCCCAAACAAACAAACAACTAAAATTCCAAATGATAACATATCATCTCT
GCTAAGTGACTGGGAAGACTCGCAAGAAGATTTGAGTAGCAATGACGAAAATATTGATAA
TATATTACCAAAAGAGTATGAAGAAAAATTGCGAAATGATTTACCCGATTACAATATACA
AAATATTGATAGAGGTTTACCCAATCTGAATGATGAGAAAGATGATGAGGATCTAATAAA
AGTTAGCAAAGAAAAGGTACATAATGACCTAACAAACGCAGATGAGAAAACAGATATTTG
CTTGACAAAAGACAGTGAAGGAATATCTGACAGTGGTCTGCCAAAAAGGAACAGGGAAGA
AATGGGTGACCCTTTACATGTTAAGCAAATCGAAAATGTATTAGCAAATATAAATGAAGG
GATAGTTTCCACTGAATGTAATAATCGTACAGAAAAAGTTATTCTAGATGAACCAAATAG
TGGACTTTTAGAAACAGCTGAGAAAAAAGCTTCACATGATCCTGCACCAGATAATGAAAC
CGATAAACCAGATGACAAAATAAAAAGTTTAGTCAGTGATTGGGATGATGACGATGAGGA
AAGTAAAATCAATTAATACTTAGCATCGAACTTTGGGGCTGAGATCGGAAGAG
(4313 bp)

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