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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoASG_c27109_g2_i5
Scaffold_idBomo_Chr3
NCBI non-redundant
(nr)		Niemann-Pick_C1_protein_[Bombyx_mori]
Ontology
GO:0005319 F lipid transporter activity
GO:0005576 C extracellular region
GO:0005635 C nuclear envelope
GO:0005764 C lysosome
GO:0005765 C lysosomal membrane
GO:0005768 C endosome
GO:0005783 C endoplasmic reticulum
GO:0005887 C integral component of plasma membrane
GO:0006486 P protein glycosylation
GO:0006629 P lipid metabolic process
GO:0007041 P lysosomal transport
GO:0007165 P signal transduction
GO:0008158 F hedgehog receptor activity
GO:0008202 P steroid metabolic process
GO:0008203 P cholesterol metabolic process
GO:0008206 P bile acid metabolic process
GO:0015485 F cholesterol binding
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030301 P cholesterol transport
GO:0031902 C late endosome membrane
GO:0042632 P cholesterol homeostasis
GO:0048471 C perinuclear region of cytoplasm
Transcript
Level		FPKM:15.27 TPM:11.71
ORF EntryO_BomoASG11638_complete:A_BomoASG_c27109_g2_i5
Sequence
(Nucleotide)
TTCCGATCTATACAACTCACTTCACTTTGATTCAGTTTCTCTCCAAATCTCGAGCTTTCG
GGAAGCTAATTGTGCGCGATAGTGGTGCGTTATGTCGGACAAATAATTTATTTATGATTT
TTGTTATTTTATTTTTTACTCTACGTAACTCACGTTAGAGAAACGTATTTTTTGGACAAG
CTCTAATTATAATATGCTAATAAAATTGAATCTAATCATTTCATTGTGAAAAATAAGGAT
AAAAGATGGCTGATCGCGGAAGTTTTTTGCGACGATTTCTATCTGCCTTGTTTTTTCTAT
TGGTGTTAGTAGAACATATCCCGTCTGCTCTGGCCGAAGATGGTCACTGCATATGGTACG
GCGTTTGTGCGAACAGCACAGAACATAAAATGATGAATTGTTTCTATGATGGACCCGCTA
AACCGATCGAAGAAAAGGCAATGAAAATAATTGAGCAATATTGTCCCGAGATAGCCAAAG
GAGGTTATTCGTGCTGCAATTACGAACAACTGAACCAGCTCAAAGTGAATATCGCCCTTG
CGGAAAATTTGCTGGGGAGATGCCCGACGTGCTTTCAGAACTTTTTGAAGCCGATCTGTG
GAATGGCCTGCGCCGTCGATCAGAGCAAATACTTGAAGCCAGTTCAAACAGAACAGTTCA
ACGGTACACATCGCAGGATATCTGAGATCGATTACTACCTGAGTAAAACTTTCATGGATG
GCATCTACAACTCATGCTCTGAGGTTAAGCTTACGTCAACAAACGAGCGATCCATAAAGG
TGATGTGCGGTCAGTGGGGAGACGCGTGCTCGGCGCAACGTTGGTTCGATAACATGGGGG
ACGCTTCCAACTATCAAGTGCCCTTCCAGATTAACTATAAGGCCACTGACGTGCCCGTCG
ATGGGTACACGCCCTACGCTCCGATAGCCGAGCCCTGCAATGTCGGAACGAAGGGCATGC
CGGGCTGCTCGTGCCTGGACTGCGAGGCGTCGTGCCCCGCGCCCCCGCCGCGCCCCCCGC
CCCCGCAGCCGTTCTCCATCGCGGGCTTCGACGGCTACGCAATCGTCATGACCATCGTAT
TCTGTATCTTCTCGACGCTGTTCCTCACGGGCGTCTTCTGTTGCAATCAAACCGAAAACC
TCGTTGGTGTGTCTTCAGACAACAATCAAGAGATGGGAACAAACGCGTCGGGCACGCGCT
GGACCATGGAGGCCACCGATGGCGACGAGACAGACGCGACGTTCCTCGAGAAGCTCGGTG
CTGCGACGGAATCCAAAATTGAAGACTTCTTCCAGTGGTGGGGCTGCGTCATGGCCTCCT
CGCCTTGGCTGGTCCTCTTCTCTGGTTTGTGCGTTGTGGTGATCCTCGGCTCCGGCATCA
CGTACATGCAGGTGACCACCGACCCCGTGGAGCTGTGGGCCTCGCCCACCTCGCGCTCCA
GGGTCGAGAGGCAGCGGTTCGATTCCTACTTCGAACCTTTCTACAGGACAGAAATGTTAA
TAATCAGCTCGAAAGGTCTGCCCGAGATCGAACACGCGAACCTGACTTTCGGGCCTGTGT
TCAACGCCACCTTCATGCTGGACGTGTTCGACCTGCAGTCCAAGATCTTAGAGCTCGGCA
ACGAGTCCGGGATCCAGAACATTTGCTACGCGCCGCTGTCGTCGCCCTTCCGCGGCCCCG
TCACCAGCAAGGACTGCGTGCTGCAGAGCGTGTGGGGCTGGTGGCAGAACGACAAGTCCG
AGTTCTCCTACGAGGACAACGAACACCTGGACAAGATCCTGCAGTGCTCCAGCAACCCGA
TCTCGGTGGACTGCCTGTCGTCGTACGGCGGGCCCGTCCTGCCCGGCGTGGCGCTGGGCG
GCTTCCTGCCGCGCGGCGACCAGCTCTCTGCCCACGCGCCCTACCACCGCGCGCAGGCAC
TCATCCTCACCTTTCTCGTCAACAACAAGCAGGACAAGTCCCAGCTGAAACAAGCACTGG
AGTGGGAGAAGACGTTCATTGCGTTCATGAAGAACTACACGGAGAAGGCGATGCCGGGCT
ACATGGACATCGCGTACACGTCGGAGCGCTCCATCGAGGACGAGCTGGACCGCGAGTCCA
AGTCGGACGTGTACACCATCCTCGTGTCCTACTTCATCATGTTCGCGTACATCGCCATCG
CGCTCGGCCGCTTCACCACCTTCTCGCGGCTGCTCATCGACAGCAAGATCACGCTCGGGC
TCGGCGGTGTGGTTATCGTGTTGGCGTCTGTGGTGTGCTCCATGGGCATCTTCGGGTTCT
ATGGAGTGGCGGCCACGCTTATCATCGTGGAGGTCATCCCGTTCCTGGTGCTGGCCGTCG
GCGTCGACAACATCTTCATCCTGGTGCAGACCCACCAGCGCGAGCCGCGCCGCCCCGACG
AGACCGTCGAGCAACACATCGGTAGAATGCTCGGCAAGGTGGGCCCGTCGATGTTCGTGA
CGTCGGTGTCGGAGTCGGTGTGCTTCTTCCTGGGGGCGCTGAGCGACATGCCGGCCGTGC
GCGCCTTCGCGCTGTACGCCGCCGTGGCGCTGCTCGTGGACTTCCTGCTGCAGGTCACCT
GCTTCGTGGCGCTGCTGGCGCTGGACACGCGCCGACAACTCGACAACAGGTTCGATATAT
TCTGCTGTCTGCGGGGCACCAAAACAGACCTGGCAGAACAAGGTGAAGGAGCATTGTACA
ACCTGTTTCAACATTTCTATGTACCTTTCCTGATGAAGAGGGAAGTCAGAGCCTCAGTCA
TGATTATATTCTTTGCTTGGCTCTGCTCGTCTGTTGCTGTAGCGCCTCACATCGACATCG
GACTAGACCAAGAGCTGTCTATGCCCCACGACAGTTTCCAGTTGAAGTACTTCCAGCATC
TGAACCGCTACCTGAACATCGGTCCGCCGGTCTACTTTGTGCTCACGGACGCCGAGACGG
ACGCCAAGCTGAACTACTCCACCCCCGACGTGCAGAACTTGCTGTGCGGCTCGAGGTTCT
GTAGACCCGACAGTCTCGCCATGCAGATATACGCTGCGTCCCGCAGCCCGGCCGACACGT
ACATCGCGGCTCCAGCCAACTCTTGGCTCGACGACTTCTTCGACTGGTCTGTCTCACCGG
AGTGCTGCTTCTACTTCCAGTCCAACAACAGCTTCTGTCCCAGCGACACTCAACCCGACG
ATTGTGCCGCTTGCAACATAAAGTTGGTGCAGCCGGAAGAGCGTCCCAGCCCGCAGGACT
TCAGCACGTACCTGCCGTACTTCCTGCAGGACAACCCGTCGAGCCGCTGCGTCAAGGGAG
GCCACGCGGCCTACTCGCACGCCGTCAACCTGCGCTCGCACAGCCAGAACACCACCGGGA
TCGGCGCCACCTACTACCAGAGCTACCACACGGTCCTGCGCAGCAGCTCGGACTACTACG
GCAGCCTGCGGGCGGCGCGCGCGCTGGCGGGCTCGCTCACGGAGACGCTCAACGCGCACC
TCCGCGACCTGGGACACTCCGCCACCGTCAACGTCTTCCCCTACTCGGTCTTCTACGTCT
TCTACGAGCAGTACCTCACCATGTGGTCCGACACCCTCAAGAGCATGGGCATCTCCGTGC
TCTCCATATTCTTCGTCACCTTCGTGCTCATGGGCTTCGATCTCTTCTCGGCTCTTGTAG
TCGTAGTGACCATCACTATGATTGTTGTTAATCTCGGCGGCCTCATGTACTGGTGGGGCA
TCAGTTTGAATGCAGTCTCGCTTGTAAATTTGGTGATGGCGGTGGGCATATCGGTGGAGT
TCTGCTCGCACCTGGTGCACTCGTTCAGCGTGTCGGCGGGGCGCGGGCGCGGGGAGCGCG
CGGCGGACGCGCTGCTGCGCATGGGCTCGTCCGTGCTGTCCGGCATCACGCTCACCAAGT
TCGGCGGCATCATCGTGCTCGCCACGGCCAAGAGCCAGATCTTCCAGGTGTTCTACTTCC
GGATGTACCTCGGGATTGTGCTGTTCGGTGCGGCCCACGGACTCGTATTCCTGCCGGTTA
TGCTCAGCTATATCGGTTCGCCGGTTAACAAACAGAAGCTGGCCAACCAGAGGCGGCGCG
GCAACGAGACGACGGTCGCCGAAAGTTCGCTCACACGAGTAAGACACGGCCACCCCACAT
ATTACAGAGAGTACACGTTCGACTCGATACCCTCGTGAGCTTGCACGGACGATGTTTAGC
TGAGACGCGCGGAGGCTGCGTAAACGTAAGCTAGGAAACTGTTTGTCTACTCTAAGTACT
GTTTGTTATACGACATTATAATGGCAGAAAAAAATCTAGTTCACTCAGTCTGCCCATATA
AGACGATAAGTAAATACATAAAATGTTTTATATACATTTTTGGAAGAGCAAAAAAACTTT
AAGTATTAACAAATCAAGACATTACAGTAATAGTTAATTCGCATTAATTTCGTCACATTT
AAGATCTAAGAACGTGTCTGTCCGTACGACTGCTATAACAGATTTTAGATACAATAGATG
TTTGACGCGCGGAAAGTATTTAGTGTCACTTGCAAGCCGCCTCCGTCTCGTTTGAGTTCG
TTTACCCGGCACGACAGCTTTGTGTTACATTGCGCGCTATCCATGAATTAAAAAAAAAAT
CGAACGTCGAATGTTTTAGTGCTAGCTAACGTTTACACGGGAGTATTTGATTGTACCCTA
ACAACCTAGGGAATTATATTTGCAAATAAAAATGCTCAGCTAAACATTGTATAATACAAT
TTCGTCACGCAAACAACGCGTCCATGTATGCTGTACAATATTAAAACAAGTCGCATATTA
AATGTTTCAATTAGTATTTTTCTATCCGTACGTACACAGTATTATTTTATTCCTGAGTGT
TTTATTTTTAGAGAAATGCTACTTGAAATGCTACTTACTGTTACGGCCTTGTTTTCGTAT
TTTGTTTTTTAATTTATATTTCGTTAAATATTTTTGTGACTTTGAGAACAACGTTCAGGT
CAGGATATATTTAGTTGTTATTAAATATATTATATAAAATGCTTCAATGTTCATTTTGTA
GAAATAAACGATGGATCCGTTTTATGTACAGCTATGCACTGTAATGTTAAAATAATATTA
TTTGTAAAATTAAACCATTTGAGTCTTTCTTTTCGTTTTGCTTGTAGTAATTAATATATA
ATAATTTTAATATTATATTAACACCGTTTTACTTAACGAAGGTCACAAAAATATTTATCA
GGGAGAGCGGTTTTATTTTATTTTTTTACCTTTATCTTTGTATTTTGTTAAGTTAACAAC
ACAATATGTTATTTTATATTACACTTCCAACAAACTGGTTTCTAACCTGTTTTATGGTAC
ATGGTATAAAACTGCGTATTTACATTAAAGTAACAAATGTTTTTTTTTTTCTATAATTAA
TATGCATGCCGTTTATTTTTTTAATGAAGAAATTTTACTATTTATTTTCTTTTTTTTTTT
GCTGTCAACTATAATAATTATAATTTATTATTGATATTTGTTGGTGACGTGTCGCTATCT
GCTTCCGCCGTAATGTTCTTATACGTTTCAAAATAAATTATGAAATAATAATGTTTAAGA
CATTGAATATTGGTGGTTGTCTGATGCAATATCGTGGTTGGGAACTTTTAAACAAATGAT
CAAATATTAATTCTGAAGTCTCAAATTTTTAATTATTTTCATTTGTATATATTACAATTT
AAATTATGAAATACACATTTTACATTATATAATAGTAAAATGGTAAATGAATTAACTAAT
TAAATTATTATTATTTAGAAGCTTTTGGA
(5789 bp)

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